CL:0000473: Difference between revisions
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|located_in= | |located_in= | ||
|name=defensive cell | |name=defensive cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:34, 12 September 2014
| Name: | defensive cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A cell whose primary function is to protect the organism." [JB:jb] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000003(native cell) |
|---|
Children
| is a: | CL:0000234 (phagocyte),CL:0000682 (M cell of gut) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11232-116C8 (Macrophage - monocyte derived, donor1)
- 11313-117C8 (Macrophage - monocyte derived, donor2)
- 11389-118C3 (Macrophage - monocyte derived, donor3)
- 11501-119F7
- 11641-122D3 (Mouse Microglia, donor3)
- 11662-122F6
- 11718-123C8 (Mouse Microglia, donor1)
- 11736-123E8 (Mouse Microglia, donor2)
- 11788-124B6 (CD14+CD16- Monocytes, donor1)
- 11799-124C8 (CD14+CD16- Monocytes, donor2)
... further results Mouse (Mus musculus)
- 11232-116C8 (Macrophage - monocyte derived, donor1)
- 11313-117C8 (Macrophage - monocyte derived, donor2)
- 11389-118C3 (Macrophage - monocyte derived, donor3)
- 11501-119F7
- 11641-122D3 (Mouse Microglia, donor3)
- 11662-122F6
- 11718-123C8 (Mouse Microglia, donor1)
- 11736-123E8 (Mouse Microglia, donor2)
- 11788-124B6 (CD14+CD16- Monocytes, donor1)
- 11799-124C8 (CD14+CD16- Monocytes, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000473 (defensive cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.0e-160 | FFCP PHASE2:Hg19::chrX:37664331..37664352,+#_dcd06b8cb87806e1ab4468072a8db21e | p@chrX:37664331..37664352, + |
| 3.0e-160 | FFCP PHASE1:Hg19::chrX:37664331..37664352,+#_dcd06b8cb87806e1ab4468072a8db21e | p@chrX:37664331..37664352, + |
| 1.12e-152 | FFCP PHASE1:Hg19::chr17:72606825..72606838,-#_fea5a23c2d3d7ec025a3fd3861d99c44 | p@chr17:72606825..72606838, - |
| 1.12e-152 | FFCP PHASE2:Hg19::chr17:72606825..72606838,-#_fea5a23c2d3d7ec025a3fd3861d99c44 | p@chr17:72606825..72606838, - |
| 4.58e-152 | FFCP PHASE1:Hg19::chr11:58979924..58979941,-#_6e6a267af2bef6bd9393ce8389162c55 | p4@MPEG1 |
| 4.58e-152 | FFCP PHASE2:Hg19::chr11:58979924..58979941,-#_6e6a267af2bef6bd9393ce8389162c55 | p4@MPEG1 |
| 5.71e-152 | FFCP PHASE1:Hg19::chr8:71452856..71452863,+#_91b40bda88264d3a4d9956cc9915d205 | p@chr8:71452856..71452863, + |
| 5.71e-152 | FFCP PHASE2:Hg19::chr8:71452856..71452863,+#_91b40bda88264d3a4d9956cc9915d205 | p@chr8:71452856..71452863, + |
| 2.22e-151 | FFCP PHASE1:Hg19::chr17:72607351..72607373,-#_92add84c6913b2db58f3fa96cab419c8 | p@chr17:72607351..72607373, - |
| 2.22e-151 | FFCP PHASE2:Hg19::chr17:72607351..72607373,-#_92add84c6913b2db58f3fa96cab419c8 | p@chr17:72607351..72607373, - |
| 2.51e-151 | FFCP PHASE2:Hg19::chr19:55208119..55208134,+#_6f644f0f5674ed9d04cd521c45d397ac | p1@LILRP1 |
| 2.51e-151 | FFCP PHASE1:Hg19::chr19:55208119..55208134,+#_6f644f0f5674ed9d04cd521c45d397ac | p1@LILRP1 |
| 6.02e-151 | FFCP PHASE1:Hg19::chr4:185314351..185314392,+#_ec8f6c6f49904d6e6c4d35c55e540ee8 | p@chr4:185314351..185314392, + |
| 6.02e-151 | FFCP PHASE2:Hg19::chr4:185314351..185314392,+#_ec8f6c6f49904d6e6c4d35c55e540ee8 | p@chr4:185314351..185314392, + |
| 1.13e-150 | FFCP PHASE1:Hg19::chr7:44661060..44661101,-#_2d2c5d9f82622b3f08d5ffaa382caf3d | p@chr7:44661060..44661101, - |
| 1.13e-150 | FFCP PHASE2:Hg19::chr7:44661060..44661101,-#_2d2c5d9f82622b3f08d5ffaa382caf3d | p@chr7:44661060..44661101, - |
| 2.0e-150 | FFCP PHASE1:Hg19::chr17:72628050..72628077,-#_c5235056c4e8805bcd04126aaa740577 | p@chr17:72628050..72628077, - |
| 2.0e-150 | FFCP PHASE2:Hg19::chr17:72628050..72628077,-#_c5235056c4e8805bcd04126aaa740577 | p@chr17:72628050..72628077, - |
| 9.24e-150 | FFCP PHASE1:Hg19::chr14:55249943..55249971,+#_c0289903ab798846ac2fb0b450779a3e | p@chr14:55249943..55249971, + |
| 9.24e-150 | FFCP PHASE2:Hg19::chr14:55249943..55249971,+#_c0289903ab798846ac2fb0b450779a3e | p@chr14:55249943..55249971, + |
| 1.2e-149 | FFCP PHASE2:Hg19::chr7:151503418..151503445,+#_a268ba13012b0bc23cbcd75b396de82b | p1@ENST00000481153 |
| 1.2e-149 | FFCP PHASE1:Hg19::chr7:151503418..151503445,+#_a268ba13012b0bc23cbcd75b396de82b | p1@ENST00000481153 |
| 5.67e-149 | FFCP PHASE2:Hg19::chr17:72607002..72607029,+#_77536faf144489dd5053a5462cdb55c6 | p@chr17:72607002..72607029, + |
| 5.67e-149 | FFCP PHASE1:Hg19::chr17:72607002..72607029,+#_77536faf144489dd5053a5462cdb55c6 | p@chr17:72607002..72607029, + |
| 6.94e-148 | FFCP PHASE1:Hg19::chr17:7482481..7482508,-#_aa6f06130c8b1fcbcd4b6dc2f2d28c89 | p@chr17:7482481..7482508, - |
| 6.94e-148 | FFCP PHASE2:Hg19::chr17:7482481..7482508,-#_aa6f06130c8b1fcbcd4b6dc2f2d28c89 | p@chr17:7482481..7482508, - |
| 1.27e-147 | FFCP PHASE2:Hg19::chr8:11755021..11755054,+#_fec7e49c1f09c979b408b4f9784f050d | p@chr8:11755021..11755054, + |
| 1.27e-147 | FFCP PHASE1:Hg19::chr8:11755021..11755054,+#_fec7e49c1f09c979b408b4f9784f050d | p@chr8:11755021..11755054, + |
| 1.17e-146 | FFCP PHASE1:Hg19::chr3:128943968..128943986,+#_e3b1de1b8345a7163a9f314375969db3 | p@chr3:128943968..128943986, + |
| 1.17e-146 | FFCP PHASE2:Hg19::chr3:128943968..128943986,+#_e3b1de1b8345a7163a9f314375969db3 | p@chr3:128943968..128943986, + |
| 1.84e-146 | FFCP PHASE1:Hg19::chr2:143623608..143623622,-#_98e49e2fe258f4dfc2644432875824de | p@chr2:143623608..143623622, - |
| 1.84e-146 | FFCP PHASE2:Hg19::chr2:143623608..143623622,-#_98e49e2fe258f4dfc2644432875824de | p@chr2:143623608..143623622, - |
| 8.93e-146 | FFCP PHASE1:Hg19::chr19:51625943..51625962,+#_c2a205308e4cee48f4ec3a4d30a114a8 | p@chr19:51625943..51625962, + |
| 8.93e-146 | FFCP PHASE2:Hg19::chr19:51625943..51625962,+#_c2a205308e4cee48f4ec3a4d30a114a8 | p@chr19:51625943..51625962, + |
| 1.23e-145 | FFCP PHASE1:Hg19::chr1:161188746..161188758,+#_d42de0113f93184de5f9688a174d9592 | p@chr1:161188746..161188758, + |
| 1.23e-145 | FFCP PHASE2:Hg19::chr1:161188746..161188758,+#_d42de0113f93184de5f9688a174d9592 | p@chr1:161188746..161188758, + |
| 2.49e-145 | FFCP PHASE1:Hg19::chr19:51625924..51625942,+#_d8bad4b8ca9808e1b5a23c5dc3a56916 | p@chr19:51625924..51625942, + |
| 2.49e-145 | FFCP PHASE2:Hg19::chr19:51625924..51625942,+#_d8bad4b8ca9808e1b5a23c5dc3a56916 | p@chr19:51625924..51625942, + |
| 2.76e-145 | FFCP PHASE1:Hg19::chr1:111182849..111182891,+#_2900c967d8a10cf8e6b97e7e6b0a565c | p@chr1:111182849..111182891, + |
| 2.76e-145 | FFCP PHASE2:Hg19::chr1:111182849..111182891,+#_2900c967d8a10cf8e6b97e7e6b0a565c | p@chr1:111182849..111182891, + |
| 4.97e-145 | FFCP PHASE2:Hg19::chr17:72607152..72607174,-#_e0f2c15f75caa13a6a4a6f2fdcd75e07 | p@chr17:72607152..72607174, - |
| 4.97e-145 | FFCP PHASE1:Hg19::chr17:72607152..72607174,-#_e0f2c15f75caa13a6a4a6f2fdcd75e07 | p@chr17:72607152..72607174, - |
| 5.74e-145 | FFCP PHASE1:Hg19::chr7:77050554..77050601,+#_a77612cdb5128d3125bd9250c563f00a | p@chr7:77050554..77050601, + |
| 5.74e-145 | FFCP PHASE2:Hg19::chr7:77050554..77050601,+#_a77612cdb5128d3125bd9250c563f00a | p@chr7:77050554..77050601, + |
| 8.55e-145 | FFCP PHASE2:Hg19::chr2:145276939..145276960,+#_1bcf7b050a44bed02ba38dca91ed9918 | p2@ZEB2-AS1 |
| 8.55e-145 | FFCP PHASE1:Hg19::chr2:145276939..145276960,+#_1bcf7b050a44bed02ba38dca91ed9918 | p2@ZEB2-AS1 |
| 9.86e-145 | FFCP PHASE2:Hg19::chr11:68847043..68847057,+#_5bed98995cc03a781b33a7fa4e52c577 | p@chr11:68847043..68847057, + |
| 9.86e-145 | FFCP PHASE1:Hg19::chr11:68847043..68847057,+#_5bed98995cc03a781b33a7fa4e52c577 | p@chr11:68847043..68847057, + |
| 1.43e-144 | FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_e57374ee38ff91ae56a5141e63e4dc66 | p@chr1:161188661..161188679, + |
| 1.43e-144 | FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_e57374ee38ff91ae56a5141e63e4dc66 | p@chr1:161188661..161188679, + |
| 1.93e-144 | FFCP PHASE1:Hg19::chr5:131280548..131280574,-#_c69fda90d4ede200003974ac13f512ea | p1@ENST00000425320 |
| 1.93e-144 | FFCP PHASE2:Hg19::chr5:131280548..131280574,-#_c69fda90d4ede200003974ac13f512ea | p1@ENST00000425320 |
| 5.05e-144 | FFCP PHASE1:Hg19::chr19:18288651..18288682,+#_7693b643f0317714ef10f0e19314939e | p5@IFI30 |
| 5.05e-144 | FFCP PHASE2:Hg19::chr19:18288651..18288682,+#_7693b643f0317714ef10f0e19314939e | p5@IFI30 |
| 2.75e-143 | FFCP PHASE2:Hg19::chr1:120593738..120593745,+#_6aa9687b90bcb665670220fe6e10a692 | p@chr1:120593738..120593745, + |
| 2.75e-143 | FFCP PHASE1:Hg19::chr1:120593738..120593745,+#_6aa9687b90bcb665670220fe6e10a692 | p@chr1:120593738..120593745, + |
| 3.2e-143 | FFCP PHASE2:Hg19::chr1:27943424..27943442,-#_157d10f8b9f71fb92e51d38d6231348b | p@chr1:27943424..27943442, - |
| 3.2e-143 | FFCP PHASE1:Hg19::chr1:27943424..27943442,-#_157d10f8b9f71fb92e51d38d6231348b | p@chr1:27943424..27943442, - |
| 5.48e-143 | FFCP PHASE1:Hg19::chr7:48009999..48010016,+#_51e0306f64145ab518fe40eb42ad25fb | p@chr7:48009999..48010016, + |
| 5.48e-143 | FFCP PHASE2:Hg19::chr7:48009999..48010016,+#_51e0306f64145ab518fe40eb42ad25fb | p@chr7:48009999..48010016, + |
| 9.17e-143 | FFCP PHASE2:Hg19::chr16:82229835..82229848,+#_7542f74ab11b6b5dd311cc2cf18c37dc | p@chr16:82229835..82229848, + |
| 9.17e-143 | FFCP PHASE1:Hg19::chr16:82229835..82229848,+#_7542f74ab11b6b5dd311cc2cf18c37dc | p@chr16:82229835..82229848, + |
| 2.09e-142 | FFCP PHASE2:Hg19::chr2:129283966..129283970,+#_bf384fc01df042fd9aa84241964af65e | p@chr2:129283966..129283970, + |
| 2.09e-142 | FFCP PHASE1:Hg19::chr2:129283966..129283970,+#_bf384fc01df042fd9aa84241964af65e | p@chr2:129283966..129283970, + |
| 2.81e-142 | FFCP PHASE2:Hg19::chr15:59469817..59469836,+#_7ba15fff5205e18e9195299e9e0fc84e | p@chr15:59469817..59469836, + |
| 2.81e-142 | FFCP PHASE1:Hg19::chr15:59469817..59469836,+#_7ba15fff5205e18e9195299e9e0fc84e | p@chr15:59469817..59469836, + |
| 3.09e-142 | FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_1ea4772c32e258a78c7ac3e571d6c8a8 | p@chr2:145429606..145429658, + |
| 3.09e-142 | FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_1ea4772c32e258a78c7ac3e571d6c8a8 | p@chr2:145429606..145429658, + |
| 3.6e-142 | FFCP PHASE2:Hg19::chr10:73648356..73648408,-#_1bc9780407e69c1c7ae5ffe4b91b201a | p@chr10:73648356..73648408, - |
| 3.6e-142 | FFCP PHASE1:Hg19::chr10:73648356..73648408,-#_1bc9780407e69c1c7ae5ffe4b91b201a | p@chr10:73648356..73648408, - |
| 4.15e-142 | FFCP PHASE2:Hg19::chr4:159731607..159731627,+#_3414de455b2d42099167529a6502d43c | p@chr4:159731607..159731627, + |
| 4.15e-142 | FFCP PHASE1:Hg19::chr4:159731607..159731627,+#_3414de455b2d42099167529a6502d43c | p@chr4:159731607..159731627, + |
| 9.43e-142 | FFCP PHASE1:Hg19::chr8:11754835..11754867,-#_7ad5e8593b714e4b4d01078bd4a39d73 | p1@ENST00000525252 |
| 9.43e-142 | FFCP PHASE2:Hg19::chr8:11754835..11754867,-#_7ad5e8593b714e4b4d01078bd4a39d73 | p1@ENST00000525252 |
| 1.12e-141 | FFCP PHASE1:Hg19::chr20:2191870..2191909,-#_c5041aa6112b9ad0e8eff361b980a083 | p@chr20:2191870..2191909, - |
| 1.12e-141 | FFCP PHASE2:Hg19::chr20:2191870..2191909,-#_c5041aa6112b9ad0e8eff361b980a083 | p@chr20:2191870..2191909, - |
| 1.17e-141 | FFCP PHASE1:Hg19::chr1:161188022..161188042,+#_bb90b0e5dac90bb1f9bb29dbe07bbfff | p@chr1:161188022..161188042, + |
| 1.17e-141 | FFCP PHASE2:Hg19::chr1:161188022..161188042,+#_bb90b0e5dac90bb1f9bb29dbe07bbfff | p@chr1:161188022..161188042, + |
| 3.2e-141 | FFCP PHASE1:Hg19::chr17:72606678..72606702,-#_9ad136b9b798ec91023f270fcb3f9593 | p@chr17:72606678..72606702, - |
| 3.2e-141 | FFCP PHASE2:Hg19::chr17:72606678..72606702,-#_9ad136b9b798ec91023f270fcb3f9593 | p@chr17:72606678..72606702, - |
| 3.49e-141 | FFCP PHASE1:Hg19::chr22:17717917..17717939,-#_ae151560f6e57e9950e627b61edcdcf0 | p@chr22:17717917..17717939, - |
| 3.49e-141 | FFCP PHASE2:Hg19::chr22:17717917..17717939,-#_ae151560f6e57e9950e627b61edcdcf0 | p@chr22:17717917..17717939, - |
| 4.64e-141 | FFCP PHASE2:Hg19::chr6:46698996..46699019,+#_156f1efac335dcb5a3fa3fdd96575fc3 | p@chr6:46698996..46699019, + |
| 4.64e-141 | FFCP PHASE1:Hg19::chr6:46698996..46699019,+#_156f1efac335dcb5a3fa3fdd96575fc3 | p@chr6:46698996..46699019, + |
| 5.93e-141 | FFCP PHASE2:Hg19::chr2:143623546..143623573,-#_eefd24c96cb0899e25473730f1ade44e | p@chr2:143623546..143623573, - |
| 5.93e-141 | FFCP PHASE1:Hg19::chr2:143623546..143623573,-#_eefd24c96cb0899e25473730f1ade44e | p@chr2:143623546..143623573, - |
| 6.3e-141 | FFCP PHASE2:Hg19::chr12:125197870..125197907,+#_93a3ed8a9e218e71e3df58d00fea1b72 | p@chr12:125197870..125197907, + |
| 6.3e-141 | FFCP PHASE1:Hg19::chr12:125197870..125197907,+#_93a3ed8a9e218e71e3df58d00fea1b72 | p@chr12:125197870..125197907, + |
| 6.36e-141 | FFCP PHASE2:Hg19::chr20:2191845..2191866,-#_56c9edf02361a898adec252a6897b0f7 | p@chr20:2191845..2191866, - |
| 6.36e-141 | FFCP PHASE1:Hg19::chr20:2191845..2191866,-#_56c9edf02361a898adec252a6897b0f7 | p@chr20:2191845..2191866, - |
| 6.5e-141 | FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_2fe32c54be11b6c5c0f78bf0de1d7931 | p1@CYP1B1-AS1 |
| 6.5e-141 | FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_2fe32c54be11b6c5c0f78bf0de1d7931 | p1@CYP1B1-AS1 |
| 7.62e-141 | FFCP PHASE1:Hg19::chr5:156534439..156534470,+#_342481df3ae926e25051538d6a94b9e2 | p@chr5:156534439..156534470, + |
| 7.62e-141 | FFCP PHASE2:Hg19::chr5:156534439..156534470,+#_342481df3ae926e25051538d6a94b9e2 | p@chr5:156534439..156534470, + |
| 1.24e-140 | FFCP PHASE1:Hg19::chr2:145421047..145421067,+#_9af075899727c8139fd6b27b574e1e04 | p@chr2:145421047..145421067, + |
| 1.24e-140 | FFCP PHASE2:Hg19::chr2:145421047..145421067,+#_9af075899727c8139fd6b27b574e1e04 | p@chr2:145421047..145421067, + |
| 1.97e-140 | FFCP PHASE1:Hg19::chr9:137300477..137300490,+#_3b6e4115d0e0ef40fbaf8c30f15dae5d | p@chr9:137300477..137300490, + |
| 1.97e-140 | FFCP PHASE2:Hg19::chr9:137300477..137300490,+#_3b6e4115d0e0ef40fbaf8c30f15dae5d | p@chr9:137300477..137300490, + |
| 3.85e-140 | FFCP PHASE2:Hg19::chr10:106006943..106006961,+#_1640037d3a7147b1d7f4b02fbbd12f57 | p@chr10:106006943..106006961, + |
| 3.85e-140 | FFCP PHASE1:Hg19::chr10:106006943..106006961,+#_1640037d3a7147b1d7f4b02fbbd12f57 | p@chr10:106006943..106006961, + |
