CL:0000623: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=natural killer cell | |name=natural killer cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:35, 12 September 2014
| Name: | natural killer cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells." [GOC:add, ISBN:0781735149, PMID:15771571] | ||
| Xrefs: |
| ||
| Synonyms: |
"large granular lymphocyte" BROAD [] "NK cell" EXACT [] "null cell" BROAD [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000542(lymphocyte) |
|---|---|
| develops_from: | CL:0000825(pro-NK cell) |
Children
| disjoint from: | CL:0000084 (T cell) |
|---|---|
| derives from: | FF:0000119 (human natural killer cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11230-116C6 (Natural Killer Cells, donor1)
- 11311-117C6 (Natural Killer Cells, donor2)
- 11387-118C1 (Natural Killer Cells, donor3)
Mouse (Mus musculus)
- 11230-116C6 (Natural Killer Cells, donor1)
- 11311-117C6 (Natural Killer Cells, donor2)
- 11387-118C1 (Natural Killer Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000623 (natural killer cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.79e-195 | FFCP PHASE1:Hg19::chr11:115085875..115085888,+#_a428f1fa76d08f93945cd96e423756fd | p@chr11:115085875..115085888, + |
| 2.79e-195 | FFCP PHASE1:Hg19::chr3:4892090..4892095,-#_a428f1fa76d08f93945cd96e423756fd | p@chr3:4892090..4892095, - |
| 2.79e-195 | FFCP PHASE1:Hg19::chr8:103110281..103110286,+#_a428f1fa76d08f93945cd96e423756fd | p@chr8:103110281..103110286, + |
| 2.79e-195 | FFCP PHASE2:Hg19::chr11:115085875..115085888,+#_a428f1fa76d08f93945cd96e423756fd | p@chr11:115085875..115085888, + |
| 2.79e-195 | FFCP PHASE2:Hg19::chr3:4892090..4892095,-#_a428f1fa76d08f93945cd96e423756fd | p@chr3:4892090..4892095, - |
| 2.79e-195 | FFCP PHASE2:Hg19::chr8:103110281..103110286,+#_a428f1fa76d08f93945cd96e423756fd | p@chr8:103110281..103110286, + |
| 3.27e-147 | FFCP PHASE1:Hg19::chr2:145267967..145267972,-#_1a317224837b1a65b5dc279c6c28d81d | p@chr2:145267967..145267972, - |
| 3.27e-147 | FFCP PHASE2:Hg19::chr8:103126233..103126242,-#_1a317224837b1a65b5dc279c6c28d81d | p@chr8:103126233..103126242, - |
| 3.27e-147 | FFCP PHASE1:Hg19::chr18:46360601..46360610,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr18:46360601..46360610, + |
| 3.27e-147 | FFCP PHASE1:Hg19::chr2:240467130..240467134,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr2:240467130..240467134, + |
| 3.27e-147 | FFCP PHASE1:Hg19::chr7:38357449..38357458,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr7:38357449..38357458, + |
| 3.27e-147 | FFCP PHASE2:Hg19::chr8:103120766..103120771,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr8:103120766..103120771, + |
| 3.27e-147 | FFCP PHASE2:Hg19::chr22:38597578..38597586,-#_1a317224837b1a65b5dc279c6c28d81d | p@chr22:38597578..38597586, - |
| 3.27e-147 | FFCP PHASE2:Hg19::chr7:38357449..38357458,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr7:38357449..38357458, + |
| 3.27e-147 | FFCP PHASE2:Hg19::chr11:65401401..65401406,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr11:65401401..65401406, + |
| 3.27e-147 | FFCP PHASE1:Hg19::chr8:103126233..103126242,-#_1a317224837b1a65b5dc279c6c28d81d | p@chr8:103126233..103126242, - |
| 3.27e-147 | FFCP PHASE2:Hg19::chr19:45953439..45953444,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr19:45953439..45953444, + |
| 3.27e-147 | FFCP PHASE2:Hg19::chr8:66750085..66750091,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr8:66750085..66750091, + |
| 3.27e-147 | FFCP PHASE1:Hg19::chr19:45953439..45953444,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr19:45953439..45953444, + |
| 3.27e-147 | FFCP PHASE1:Hg19::chr8:103120766..103120771,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr8:103120766..103120771, + |
| 3.27e-147 | FFCP PHASE2:Hg19::chr2:145267967..145267972,-#_1a317224837b1a65b5dc279c6c28d81d | p@chr2:145267967..145267972, - |
| 3.27e-147 | FFCP PHASE2:Hg19::chr9:136007795..136007801,-#_1a317224837b1a65b5dc279c6c28d81d | p@chr9:136007795..136007801, - |
| 3.27e-147 | FFCP PHASE1:Hg19::chr8:66750085..66750091,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr8:66750085..66750091, + |
| 3.27e-147 | FFCP PHASE2:Hg19::chr18:46360601..46360610,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr18:46360601..46360610, + |
| 3.27e-147 | FFCP PHASE1:Hg19::chr22:38597578..38597586,-#_1a317224837b1a65b5dc279c6c28d81d | p@chr22:38597578..38597586, - |
| 3.27e-147 | FFCP PHASE2:Hg19::chr2:240467130..240467134,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr2:240467130..240467134, + |
| 3.27e-147 | FFCP PHASE1:Hg19::chr9:136007795..136007801,-#_1a317224837b1a65b5dc279c6c28d81d | p@chr9:136007795..136007801, - |
| 3.27e-147 | FFCP PHASE1:Hg19::chr11:65401401..65401406,+#_1a317224837b1a65b5dc279c6c28d81d | p@chr11:65401401..65401406, + |
| 8.93e-147 | FFCP PHASE2:Hg19::chr7:38320712..38320736,+#_4c1ca0598070f231b04b441724c1cf1d | p@chr7:38320712..38320736, + |
| 8.93e-147 | FFCP PHASE1:Hg19::chr1:167420291..167420294,+#_4c1ca0598070f231b04b441724c1cf1d | p@chr1:167420291..167420294, + |
| 8.93e-147 | FFCP PHASE2:Hg19::chr1:167400749..167400756,-#_4c1ca0598070f231b04b441724c1cf1d | p2@EF079882 |
| 8.93e-147 | FFCP PHASE2:Hg19::chr1:167420291..167420294,+#_4c1ca0598070f231b04b441724c1cf1d | p@chr1:167420291..167420294, + |
| 8.93e-147 | FFCP PHASE1:Hg19::chr1:167400749..167400756,-#_4c1ca0598070f231b04b441724c1cf1d | p2@EF079882 |
| 8.93e-147 | FFCP PHASE1:Hg19::chr7:38320712..38320736,+#_4c1ca0598070f231b04b441724c1cf1d | p@chr7:38320712..38320736, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr6:37019056..37019063,-#_22b494a5520b948f94bb6d6a8e37f288 | p@chr6:37019056..37019063, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr12:9994967..9994968,+#_22b494a5520b948f94bb6d6a8e37f288 | p@chr12:9994967..9994968, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr6:2940707..2940710,+#_22b494a5520b948f94bb6d6a8e37f288 | p@chr6:2940707..2940710, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr5:172281403..172281405,-#_22b494a5520b948f94bb6d6a8e37f288 | p@chr5:172281403..172281405, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr12:9994967..9994968,+#_22b494a5520b948f94bb6d6a8e37f288 | p@chr12:9994967..9994968, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr18:74804978..74804993,+#_22b494a5520b948f94bb6d6a8e37f288 | p@chr18:74804978..74804993, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr6:37019056..37019063,-#_22b494a5520b948f94bb6d6a8e37f288 | p@chr6:37019056..37019063, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr18:74804978..74804993,+#_22b494a5520b948f94bb6d6a8e37f288 | p@chr18:74804978..74804993, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr22:38597593..38597598,-#_22b494a5520b948f94bb6d6a8e37f288 | p@chr22:38597593..38597598, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr22:38597593..38597598,-#_22b494a5520b948f94bb6d6a8e37f288 | p@chr22:38597593..38597598, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr6:2940707..2940710,+#_22b494a5520b948f94bb6d6a8e37f288 | p@chr6:2940707..2940710, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr5:172281403..172281405,-#_22b494a5520b948f94bb6d6a8e37f288 | p@chr5:172281403..172281405, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr22:39474405..39474438,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr22:39474405..39474438, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr5:169705868..169705875,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr5:169705868..169705875, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr2:111610415..111610439,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr2:111610415..111610439, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr17:33776655..33776667,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr17:33776655..33776667, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr11:121353266..121353274,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr11:121353266..121353274, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr17:33776655..33776667,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr17:33776655..33776667, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr1:167458837..167458845,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr1:167458837..167458845, - |
| 2.33e-118 | FFCP PHASE2:Hg19::chr11:67037100..67037109,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr11:67037100..67037109, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr7:38320586..38320596,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr7:38320586..38320596, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr1:167458837..167458845,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr1:167458837..167458845, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr11:67037100..67037109,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr11:67037100..67037109, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr4:48116513..48116522,-#_5bff6ff16f029389f9e84a5e9cacacdf | p9@TXK |
| 2.33e-118 | FFCP PHASE2:Hg19::chr19:41804394..41804429,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr19:41804394..41804429, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr12:129281246..129281271,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr12:129281246..129281271, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr11:121353266..121353274,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr11:121353266..121353274, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr2:145263300..145263311,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr2:145263300..145263311, - |
| 2.33e-118 | FFCP PHASE2:Hg19::chr2:145263300..145263311,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr2:145263300..145263311, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr7:38320586..38320596,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr7:38320586..38320596, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr1:19275176..19275185,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr1:19275176..19275185, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr10:98431336..98431339,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr10:98431336..98431339, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr18:46341777..46341782,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr18:46341777..46341782, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr5:169705868..169705875,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr5:169705868..169705875, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr1:162518235..162518252,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr1:162518235..162518252, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr10:98431336..98431339,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr10:98431336..98431339, - |
| 2.33e-118 | FFCP PHASE2:Hg19::chr17:34401981..34401994,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr17:34401981..34401994, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr19:41804394..41804429,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr19:41804394..41804429, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr18:46341777..46341782,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr18:46341777..46341782, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr22:23480066..23480080,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr22:23480066..23480080, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr17:34401981..34401994,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr17:34401981..34401994, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr2:111610415..111610439,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr2:111610415..111610439, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr12:129281246..129281271,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr12:129281246..129281271, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr1:19275176..19275185,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr1:19275176..19275185, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr1:162518235..162518252,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr1:162518235..162518252, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr7:50428238..50428247,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr7:50428238..50428247, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr4:48116513..48116522,-#_5bff6ff16f029389f9e84a5e9cacacdf | p9@TXK |
| 2.33e-118 | FFCP PHASE2:Hg19::chr22:39474405..39474438,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr22:39474405..39474438, - |
| 2.33e-118 | FFCP PHASE2:Hg19::chr22:23480066..23480080,-#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr22:23480066..23480080, - |
| 2.33e-118 | FFCP PHASE2:Hg19::chr7:50428238..50428247,+#_5bff6ff16f029389f9e84a5e9cacacdf | p@chr7:50428238..50428247, + |
| 3.48e-118 | FFCP PHASE1:Hg19::chr19:10213257..10213267,+#_e7137141ed38fcee58f4cafddfb4bc0d | p@chr19:10213257..10213267, + |
| 3.48e-118 | FFCP PHASE1:Hg19::chr1:172502793..172502831,-#_e7137141ed38fcee58f4cafddfb4bc0d | p3@BC034700 |
| 3.48e-118 | FFCP PHASE2:Hg19::chr19:10213257..10213267,+#_e7137141ed38fcee58f4cafddfb4bc0d | p@chr19:10213257..10213267, + |
| 3.48e-118 | FFCP PHASE1:Hg19::chr18:74804800..74804840,-#_e7137141ed38fcee58f4cafddfb4bc0d | p@chr18:74804800..74804840, - |
| 3.48e-118 | FFCP PHASE2:Hg19::chr1:172502793..172502831,-#_e7137141ed38fcee58f4cafddfb4bc0d | p3@BC034700 |
| 3.48e-118 | FFCP PHASE2:Hg19::chr18:74804800..74804840,-#_e7137141ed38fcee58f4cafddfb4bc0d | p@chr18:74804800..74804840, - |
| 3.48e-118 | FFCP PHASE1:Hg19::chr1:100494394..100494399,-#_e7137141ed38fcee58f4cafddfb4bc0d | p@chr1:100494394..100494399, - |
| 3.48e-118 | FFCP PHASE2:Hg19::chr1:100494394..100494399,-#_e7137141ed38fcee58f4cafddfb4bc0d | p@chr1:100494394..100494399, - |
| 5.2e-118 | FFCP PHASE2:Hg19::chr4:103421745..103421751,+#_e249bbf32d1f82790fe8fdd62d7db2f8 | p@chr4:103421745..103421751, + |
| 5.2e-118 | FFCP PHASE1:Hg19::chr4:103421745..103421751,+#_e249bbf32d1f82790fe8fdd62d7db2f8 | p@chr4:103421745..103421751, + |
| 7.78e-118 | FFCP PHASE1:Hg19::chr14:64108359..64108365,-#_3fd24065d3812ff4149c345c8732a3b3 | p9@WDR89 |
| 7.78e-118 | FFCP PHASE1:Hg19::chr18:43268301..43268305,-#_3fd24065d3812ff4149c345c8732a3b3 | p@chr18:43268301..43268305, - |
| 7.78e-118 | FFCP PHASE2:Hg19::chr14:64108359..64108365,-#_3fd24065d3812ff4149c345c8732a3b3 | p9@WDR89 |
| 7.78e-118 | FFCP PHASE2:Hg19::chr18:43268301..43268305,-#_3fd24065d3812ff4149c345c8732a3b3 | p@chr18:43268301..43268305, - |
| 4.06e-99 | FFCP PHASE1:Hg19::chr7:38320426..38320429,-#_daeeaf77e193fca6144e154223269365 | p@chr7:38320426..38320429, - |
| 4.06e-99 | FFCP PHASE1:Hg19::chr9:116281787..116281792,-#_daeeaf77e193fca6144e154223269365 | p@chr9:116281787..116281792, - |
