CL:0000084
From FANTOM5_SSTAR
Name: | T cell | |
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Namespace: | FANTOM | |
Definition: | "A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex." [GOC:add, GOC:tfm, ISBN:0781735149] | |
Xrefs: |
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Synonyms: |
"immature T cell" RELATED [] "mature T cell" RELATED [] "T lymphocyte" EXACT [] "T-cell" EXACT [] "T-lymphocyte" EXACT [] | |
Alt_id: |
CL:0000804 CL:0000812 |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000542(lymphocyte) |
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disjoint_from: | CL:0000623(natural killer cell),CL:0000945(lymphocyte of B lineage) |
develops_from: | CL:0000827(pro-T cell) |
Children
is a: | CL:0000789 (alpha-beta T cell),CL:0000798 (gamma-delta T cell),CL:0002419 (mature T cell),CL:0002420 (immature T cell),FF:10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL),FF:10795-110I3 (anaplastic large cell lymphoma cell line:Ki-JK) |
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derives from: | FF:0101014 (Mo-T cell sample),FF:0102504 (T-lymphoblastic leukemia cell line sample),FF:0103212 (T-lymphoma cell line sample),FF:0103505 (T-cell chronic lymphocytic leukemia cell sample),FF:0300104 (EBF KO HPCs induced to T cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10464-106H5 (acute lymphoblastic leukemia (T-ALL) cell line:Jurkat)
- 10467-106H8
- 10498-107C3
- 10528-107F6
- 10546-107H6
- 10547-107H7
- 10548-107H8
... further results Mouse (Mus musculus)
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10464-106H5 (acute lymphoblastic leukemia (T-ALL) cell line:Jurkat)
- 10467-106H8
- 10498-107C3
- 10528-107F6
- 10546-107H6
- 10547-107H7
- 10548-107H8
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000084 (T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data