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{{DOID
{{DOID
|id=DOID:1115
|alt_id=DOID:3936
|name=sarcoma
|namespace=disease_ontology
|def="A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from embryonic mesoderm." [url:http\://en.wikipedia.org/wiki/Sarcoma]
|xref=ICD9CM:171;;ICD9CM:171.9;;SNOMEDCT_2010_1_31:187985009;;SNOMEDCT_2010_1_31:93765001;;UMLS_CUI:C0153519
|is_a=DOID:0050687
|synonym="connective and soft tissue neoplasm" EXACT [];;"tumor of soft tissue and skeleton" EXACT [NCI2004_11_17:C3810]
|comment=
|comment=
|alt_id=DOID:3936
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from embryonic mesoderm." [url:http://en.wikipedia.org/wiki/Sarcoma]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
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|has_quality=
|id=DOID:1115
|is_a=DOID:0050687
|is_obsolete=
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|located_in=
|name=sarcoma
|namespace=FANTOM
|obo_creation_date=
|part_of=
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
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|synonym="connective and soft tissue neoplasm" EXACT [];;"tumor of soft tissue and skeleton" EXACT [NCI2004_11_17:C3810]
|union_of=
|xref=ICD9CM:171;;ICD9CM:171.9;;SNOMEDCT_2010_1_31:187985009;;SNOMEDCT_2010_1_31:93765001;;UMLS_CUI:C0153519
}}
}}

Latest revision as of 16:48, 12 September 2014

Name:sarcoma
Namespace:FANTOM
Definition:"A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from embryonic mesoderm." [url:http://en.wikipedia.org/wiki/Sarcoma]
Xrefs:
links:

ICD9CM:171
ICD9CM:171.9
SNOMEDCT_2010_1_31:187985009
SNOMEDCT_2010_1_31:93765001

UMLS_CUI:C0153519
Synonyms: "connective and soft tissue neoplasm" EXACT []
"tumor of soft tissue and skeleton" EXACT [NCI2004_11_17:C3810]
Alt_id: DOID:3936

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:0050687(cell type cancer)



Children


is a:DOID:4235 (spindle cell sarcoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1115 (sarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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