UBERON:0000486: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:CARO_0000069-FMA_45562-ZFA_0001494 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="Epithelium which consists of more than one layer of epithelial cells that may or may not be in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, ciliated stratified columnar epithelium.[FMA]" [CARO:MAH, FMA:FMA, Wikipedia:Stratified_epithelium] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000486 | |||
|is_a=UBERON:0000483 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=multilaminar epithelium | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Epithelium that consists of more than one layer of epithelial cells.[AAO]" xsd:string;;UBPROP:0000001 "Epithelium that consists of more than one layer of epithelial cells.[CARO]" xsd:string;;UBPROP:0000001 "Epithelium that consists of more than one layer of epithelial cells.[TAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Epithelium that consists of more than one layer of epithelial cells.[AAO]" xsd:string;;UBPROP:0000001 "Epithelium that consists of more than one layer of epithelial cells.[CARO]" xsd:string;;UBPROP:0000001 "Epithelium that consists of more than one layer of epithelial cells.[TAO]" xsd:string | ||
| | |subset=uberon_slim;;vertebrate_core | ||
| | |synonym="laminated epithelium" RELATED [BTO:0002074];;"stratified epithelium" EXACT [] | ||
|union_of= | |||
|xref=AAO:0010059;;AEO:0000069;;BILA:0000069;;BTO:0002074;;CARO:0000069;;EHDAA2:0003069;;FMA:45562;;HAO:0000069;;ncithesaurus:Stratified_Epithelium;;SCTID:309044005;;TAO:0001494;;XAO:0004006;;ZFA:0001494 | |||
}} | }} | ||
Latest revision as of 17:10, 12 September 2014
| Name: | multilaminar epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Epithelium which consists of more than one layer of epithelial cells that may or may not be in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, ciliated stratified columnar epithelium.[FMA]" [CARO:MAH, FMA:FMA, Wikipedia:Stratified_epithelium] | ||
| Xrefs: |
| ||
| Synonyms: |
"laminated epithelium" RELATED [BTO:0002074] "stratified epithelium" EXACT [] | ||
| Alt_id: | UBERON:CARO_0000069-FMA_45562-ZFA_0001494 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000483(epithelium) |
|---|
Children
| is a: | UBERON:0004290 (dermomyotome),UBERON:0005154 (epithelial cord),UBERON:0005910 (transitional epithelium),UBERON:0006915 (stratified squamous epithelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10418-106C4 (transitional-cell carcinoma cell line:5637)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10492-107B6 (transitional-cell carcinoma cell line:JMSU1)
- 10565-108A7
- 10587-108D2
- 10707-109H5 (transitional cell carcinoma cell line:Hs 769.T)
- 10751-110D4
- 11216-116B1 (Urothelial cells, donor0)
- 11221-116B6 (Gingival epithelial cells, donor1 (GEA11))
- 11291-117A4 (Synoviocyte, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000486 (multilaminar epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.24e-58 | FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_99416eea29c157b065c3cb0fcae5f79b | p@chrX:160838683..160838694, + |
| 5.24e-58 | FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_99416eea29c157b065c3cb0fcae5f79b | p@chrX:160838683..160838694, + |
| 5.11e-50 | FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_0e7b18d534e816933a1da9011e8ebcdb | p@chrX:65748600..65748616, + |
| 5.11e-50 | FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_0e7b18d534e816933a1da9011e8ebcdb | p@chr12:105433069..105433075, - |
| 5.11e-50 | FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_0e7b18d534e816933a1da9011e8ebcdb | p@chr12:105433069..105433075, - |
| 5.11e-50 | FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_0e7b18d534e816933a1da9011e8ebcdb | p@chrX:65748600..65748616, + |
| 1.47e-48 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_305f099388ceb76ee2a2e79d6509cfb7 | p@chrX:160838787..160838800, + |
| 1.47e-48 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_305f099388ceb76ee2a2e79d6509cfb7 | p@chrX:160838787..160838800, + |
| 8.42e-44 | FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_0375ff54f14707aa025fd3a48973187e | p@chr11:81849982..81850000, + |
| 8.42e-44 | FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_0375ff54f14707aa025fd3a48973187e | p@chr11:81849982..81850000, + |
| 1.15e-40 | FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_6df2edbabece976e51dae6d634c85ea4 | p@chr17:14813242..14813246, - |
| 1.15e-40 | FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_6df2edbabece976e51dae6d634c85ea4 | p@chr17:14813242..14813246, - |
| 3.7e-39 | FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_b91e9688d44440dae263dbedf77f2c33 | p4@Gpr39 |
| 3.7e-39 | FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_b91e9688d44440dae263dbedf77f2c33 | p4@Gpr39 |
| 3.75e-39 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_6eccb3ed015fb881272f6b3713e5ebda | p@chrX:160840048..160840057, + |
| 3.75e-39 | FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_6eccb3ed015fb881272f6b3713e5ebda | p@chrX:160823859..160823870, + |
| 3.75e-39 | FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_6eccb3ed015fb881272f6b3713e5ebda | p@chrX:160823859..160823870, + |
| 3.75e-39 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_6eccb3ed015fb881272f6b3713e5ebda | p@chrX:160840025..160840037, + |
| 3.75e-39 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_6eccb3ed015fb881272f6b3713e5ebda | p@chrX:160840048..160840057, + |
| 3.75e-39 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_6eccb3ed015fb881272f6b3713e5ebda | p@chrX:160840025..160840037, + |
| 8.95e-37 | FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_4fca88846aaaf8e4c6a08e8c8cfe7cce | p8@ARHGAP22 |
| 8.95e-37 | FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_4fca88846aaaf8e4c6a08e8c8cfe7cce | p8@ARHGAP22 |
| 3.31e-35 | FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_4e37e385e72bd76b3331905be13699a3 | p11@Fam198b |
| 3.31e-35 | FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_4e37e385e72bd76b3331905be13699a3 | p11@Fam198b |
| 3.69e-35 | FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_b7b045491dd1131772c42478c9675369 | p@chr1:127574253..127574264, + |
| 3.69e-35 | FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_b7b045491dd1131772c42478c9675369 | p@chr1:127574253..127574264, + |
| 5.09e-35 | FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_84ca12054fd5accd25cf96e978244b6c | p7@Gpr39 |
| 5.09e-35 | FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_84ca12054fd5accd25cf96e978244b6c | p7@Gpr39 |
| 5.98e-35 | FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_d8941f53e4946993242134452335da00 | p11@Gpr39 |
| 5.98e-35 | FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_d8941f53e4946993242134452335da00 | p11@Gpr39 |
| 7.03e-35 | FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_8b097abf1a4f434db6866766d4184554 | p@chrX:160839768..160839780, + |
| 7.03e-35 | FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_8b097abf1a4f434db6866766d4184554 | p@chrX:160839768..160839780, + |
| 1.33e-34 | FFCP PHASE2:Mm9::chr1:127573462..127573472,+#_9d5f934ccc084bbce5479b1fec40a175 | p8@Gpr39 |
| 1.33e-34 | FFCP PHASE1:Mm9::chr1:127573462..127573472,+#_9d5f934ccc084bbce5479b1fec40a175 | p8@Gpr39 |
| 2.57e-34 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_b9efc914889be28a83ae05ebb8e5b97e | p@chr6:53359400..53359406, + |
| 2.57e-34 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_b9efc914889be28a83ae05ebb8e5b97e | p@chr6:53359400..53359406, + |
| 8.4e-33 | FFCP PHASE1:Hg19::chr9:35685631..35685657,+#_34daf7f0586f83605f48df751b164c4f | p@chr9:35685631..35685657, + |
| 8.4e-33 | FFCP PHASE2:Hg19::chr9:35685631..35685657,+#_34daf7f0586f83605f48df751b164c4f | p@chr9:35685631..35685657, + |
| 3.09e-32 | FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_e7a8d86af9a529bee353199dff7c7f5a | p4@ARHGAP22 |
| 3.09e-32 | FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_e7a8d86af9a529bee353199dff7c7f5a | p4@ARHGAP22 |
| 3.94e-32 | FFCP PHASE1:Mm9::chr7:96658543..96658553,-#_238617ea3fd42b49c0b6062fed8a5171 | p@chr7:96658543..96658553, - |
| 3.94e-32 | FFCP PHASE2:Mm9::chr7:96658543..96658553,-#_238617ea3fd42b49c0b6062fed8a5171 | p@chr7:96658543..96658553, - |
| 1.33e-31 | FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_b0e56d39f36ca0c77b3fb0b42bf2de4a | p@chr7:91081998..91082010, - |
| 1.33e-31 | FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_b0e56d39f36ca0c77b3fb0b42bf2de4a | p2@Il6 |
| 1.33e-31 | FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_b0e56d39f36ca0c77b3fb0b42bf2de4a | p2@Il6 |
| 1.33e-31 | FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_b0e56d39f36ca0c77b3fb0b42bf2de4a | p@chr7:91081998..91082010, - |
| 1.41e-31 | FFCP PHASE2:Hg19::chr6:148593425..148593498,+#_65b1c4bf299aeb94db606b9b472e0d4c | p2@SASH1 |
| 1.41e-31 | FFCP PHASE1:Hg19::chr6:148593425..148593498,+#_65b1c4bf299aeb94db606b9b472e0d4c | p2@SASH1 |
| 1.54e-31 | FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_5f5e74db2ca71d7bb93487f01962885c | p@chr4:74703497..74703511, + |
| 1.54e-31 | FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_5f5e74db2ca71d7bb93487f01962885c | p@chr4:74703497..74703511, + |
| 1.59e-31 | FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_50da9dd860c11e650b49c087535cac69 | p@chr10:67598037..67598049, - |
| 1.59e-31 | FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_50da9dd860c11e650b49c087535cac69 | p@chr10:67598037..67598049, - |
| 2.72e-31 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_5dd968d3b576d40679a486fe43634228 | p@chr2:65009852..65009866, - |
| 2.72e-31 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_5dd968d3b576d40679a486fe43634228 | p@chr2:65009852..65009866, - |
| 2.74e-31 | FFCP PHASE1:Hg19::chr4:74702338..74702349,+#_4297f3e34edf437e1e0352fbfa614b22 | p2@CXCL6 |
| 2.74e-31 | FFCP PHASE2:Hg19::chr4:74702338..74702349,+#_4297f3e34edf437e1e0352fbfa614b22 | p2@CXCL6 |
| 2.8e-31 | FFCP PHASE2:Mm9::chr18:52678391..52678395,-#_500abe330108834b4be16d26c7c13e31 | p@chr18:52678391..52678395, - |
| 2.8e-31 | FFCP PHASE1:Mm9::chr18:52678391..52678395,-#_500abe330108834b4be16d26c7c13e31 | p@chr18:52678391..52678395, - |
| 7.65e-31 | FFCP PHASE1:Mm9::chr6:91222095..91222107,+#_ae456ac04ade6f3a3b5e92bd36ddcca9 | p@chr6:91222095..91222107, + |
| 7.65e-31 | FFCP PHASE2:Mm9::chr6:91222095..91222107,+#_ae456ac04ade6f3a3b5e92bd36ddcca9 | p@chr6:91222095..91222107, + |
| 8.77e-31 | FFCP PHASE2:Hg19::chr14:94595800..94595811,-#_baf8f650e4a20ddf6644c4021a9d73cb | p3@IFI27L2 |
| 8.77e-31 | FFCP PHASE1:Hg19::chr14:94595800..94595811,-#_baf8f650e4a20ddf6644c4021a9d73cb | p3@IFI27L2 |
| 1.01e-30 | FFCP PHASE2:Mm9::chr5:114822634..114822665,-#_abcb05f2e52acb99040c86359a329a44 | p9@Kctd10 |
| 1.01e-30 | FFCP PHASE1:Mm9::chr5:114822634..114822665,-#_abcb05f2e52acb99040c86359a329a44 | p9@Kctd10 |
| 1.17e-30 | FFCP PHASE2:Mm9::chr1:127573773..127573786,+#_34ddf0af3c960f55e83d8cc74597c385 | p6@Gpr39 |
| 1.17e-30 | FFCP PHASE1:Mm9::chr1:127573773..127573786,+#_34ddf0af3c960f55e83d8cc74597c385 | p6@Gpr39 |
| 1.75e-30 | FFCP PHASE1:Hg19::chr12:66037894..66037897,-#_651d0fa5bb1d318ccc333c0b89b6c5c8 | p@chr12:66037894..66037897, - |
| 1.75e-30 | FFCP PHASE2:Hg19::chr12:66037894..66037897,-#_651d0fa5bb1d318ccc333c0b89b6c5c8 | p@chr12:66037894..66037897, - |
| 4.92e-30 | FFCP PHASE1:Hg19::chr19:50031567..50031632,+#_64c7ae48c6d1a2d3172f9f0d44319443 | p2@RCN3 |
| 4.92e-30 | FFCP PHASE2:Hg19::chr19:50031567..50031632,+#_64c7ae48c6d1a2d3172f9f0d44319443 | p2@RCN3 |
| 7.4e-30 | FFCP PHASE2:Hg19::chr7:100773764..100773799,-#_cd174618bfe181d21eab41278bfc1331 | p@chr7:100773764..100773799, - |
| 7.4e-30 | FFCP PHASE1:Hg19::chr7:100773764..100773799,-#_cd174618bfe181d21eab41278bfc1331 | p@chr7:100773764..100773799, - |
| 8.47e-30 | FFCP PHASE1:Mm9::chr7:34998469..34998489,-#_74399547334261d24203a4ae092ff56c | p@chr7:34998469..34998489, - |
| 8.47e-30 | FFCP PHASE2:Mm9::chr7:34998469..34998489,-#_74399547334261d24203a4ae092ff56c | p@chr7:34998469..34998489, - |
| 8.84e-30 | FFCP PHASE2:Mm9::chrX:160839338..160839364,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chrX:160839338..160839364, + |
| 8.84e-30 | FFCP PHASE1:Mm9::chr9:56096674..56096680,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr9:56096674..56096680, + |
| 8.84e-30 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr2:178190171..178190178, + |
| 8.84e-30 | FFCP PHASE1:Mm9::chrX:160829660..160829667,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p14@Figf |
| 8.84e-30 | FFCP PHASE2:Mm9::chrX:160829660..160829667,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p14@Figf |
| 8.84e-30 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr17:14802633..14802637, - |
| 8.84e-30 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr8:69228447..69228492, + |
| 8.84e-30 | FFCP PHASE2:Mm9::chr9:56096674..56096680,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr9:56096674..56096680, + |
| 8.84e-30 | FFCP PHASE1:Mm9::chr9:102766842..102766853,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr9:102766842..102766853, + |
| 8.84e-30 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr17:14827154..14827169, - |
| 8.84e-30 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chrX:160839744..160839754, + |
| 8.84e-30 | FFCP PHASE2:Mm9::chr9:102766842..102766853,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr9:102766842..102766853, + |
| 8.84e-30 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr8:69228447..69228492, + |
| 8.84e-30 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr2:112043522..112043530, - |
| 8.84e-30 | FFCP PHASE2:Mm9::chr1:180919481..180919491,-#_63eef7bb54dcf033b8c88f3c2cb16612 | p4@Smyd3 |
| 8.84e-30 | FFCP PHASE2:Mm9::chr19:20567096..20567107,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p3@E030003E18Rik |
| 8.84e-30 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p5@Adamts2 |
| 8.84e-30 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr17:87574327..87574332, + |
| 8.84e-30 | FFCP PHASE1:Mm9::chr19:20567096..20567107,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p3@E030003E18Rik |
| 8.84e-30 | FFCP PHASE1:Mm9::chr7:106471695..106471701,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr7:106471695..106471701, + |
| 8.84e-30 | FFCP PHASE1:Mm9::chr16:85900926..85900936,-#_63eef7bb54dcf033b8c88f3c2cb16612 | p9@Adamts5 |
| 8.84e-30 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr2:178190171..178190178, + |
| 8.84e-30 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chr17:87574327..87574332, + |
| 8.84e-30 | FFCP PHASE2:Mm9::chr16:85900926..85900936,-#_63eef7bb54dcf033b8c88f3c2cb16612 | p9@Adamts5 |
| 8.84e-30 | FFCP PHASE1:Mm9::chr1:180919481..180919491,-#_63eef7bb54dcf033b8c88f3c2cb16612 | p4@Smyd3 |
| 8.84e-30 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_63eef7bb54dcf033b8c88f3c2cb16612 | p@chrX:160839744..160839754, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Epithelium that consists of more than one layer of epithelial cells.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Epithelium that consists of more than one layer of epithelial cells.[CARO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Epithelium that consists of more than one layer of epithelial cells.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
