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{{UBERON
{{UBERON
|id=UBERON:0001168
|alt_id=UBERON:FMA_14615-MA_0002696
|name=wall of small intestine
|namespace=
|def="An anatomical wall that is part of a small intestine [Obol]." [OBOL:automatic]
|xref=FMA:14615;;MA:0002696
|is_a=UBERON:0000060;;UBERON:0001262
|synonym="anatomical wall of small bowel" EXACT [OBOL:automatic];;"anatomical wall of small intestine" EXACT [OBOL:automatic];;"small bowel anatomical wall" EXACT [OBOL:automatic];;"small bowel wall" EXACT [OBOL:automatic];;"small intestinal wall" EXACT [];;"small intestine anatomical wall" EXACT [OBOL:automatic];;"small intestine wall" EXACT [];;"wall of small bowel" EXACT [OBOL:automatic]
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_14615-MA_0002696
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An anatomical wall that is part of a small intestine [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001168
|is_a=UBERON:0001262
|is_obsolete=
|located_in=
|located_in=
|name=wall of small intestine
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002108
|part_of=UBERON:0002108
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="anatomical wall of small bowel" EXACT [OBOL:automatic];;"anatomical wall of small intestine" EXACT [OBOL:automatic];;"small bowel anatomical wall" EXACT [OBOL:automatic];;"small bowel wall" EXACT [OBOL:automatic];;"small intestinal wall" EXACT [];;"small intestine anatomical wall" EXACT [OBOL:automatic];;"small intestine wall" EXACT [];;"wall of small bowel" EXACT [OBOL:automatic]
|union_of=
|xref=FMA:14615;;MA:0002696;;ncithesaurus:Small_Intestinal_Wall_Tissue
}}
}}

Latest revision as of 17:16, 12 September 2014

Name:wall of small intestine
Namespace:FANTOM
Definition:"An anatomical wall that is part of a small intestine [Obol]." [OBOL:automatic]
Xrefs:
links:

FMA:14615
MA:0002696

ncithesaurus:Small_Intestinal_Wall_Tissue
Synonyms: "anatomical wall of small bowel" EXACT [OBOL:automatic]
"anatomical wall of small intestine" EXACT [OBOL:automatic]
"small bowel anatomical wall" EXACT [OBOL:automatic]
"small bowel wall" EXACT [OBOL:automatic]
"small intestinal wall" EXACT []
"small intestine anatomical wall" EXACT [OBOL:automatic]
"small intestine wall" EXACT []
"wall of small bowel" EXACT [OBOL:automatic]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_14615-MA_0002696

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001262(wall of intestine)
part_of:UBERON:0002108(small intestine)



Children

part of:UBERON:0001204 (mucosa of small intestine)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001168 (wall of small intestine), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr16:32477713..32477720,-#_6b9577d45674cf8a4e177ca8053fbd72p@chr16:32477713..32477720, -
1.58e-86FFCP PHASE2:Mm9::chr11:43412172..43412177,-#_6b9577d45674cf8a4e177ca8053fbd72p@chr11:43412172..43412177, -
1.58e-86FFCP PHASE2:Mm9::chr16:32477713..32477720,-#_6b9577d45674cf8a4e177ca8053fbd72p@chr16:32477713..32477720, -
1.58e-86FFCP PHASE2:Mm9::chr4:5463968..5463972,+#_6b9577d45674cf8a4e177ca8053fbd72p@chr4:5463968..5463972, +
1.58e-86FFCP PHASE1:Mm9::chr11:43412172..43412177,-#_6b9577d45674cf8a4e177ca8053fbd72p@chr11:43412172..43412177, -
1.58e-86FFCP PHASE1:Mm9::chr4:5463968..5463972,+#_6b9577d45674cf8a4e177ca8053fbd72p@chr4:5463968..5463972, +
1.33e-65FFCP PHASE1:Mm9::chr11:43412139..43412149,-#_d6da6218d46b0cbadc6152064b9f7a42p@chr11:43412139..43412149, -
1.33e-65FFCP PHASE2:Mm9::chr11:43412139..43412149,-#_d6da6218d46b0cbadc6152064b9f7a42p@chr11:43412139..43412149, -
3.28e-58FFCP PHASE1:Mm9::chr5:31350252..31350259,-#_72382d6040781dca916665d197df91a2p13@Slc5a6
3.28e-58FFCP PHASE2:Mm9::chr11:43412215..43412219,-#_72382d6040781dca916665d197df91a2p@chr11:43412215..43412219, -
3.28e-58FFCP PHASE1:Mm9::chr3:80191466..80191470,+#_72382d6040781dca916665d197df91a2p@chr3:80191466..80191470, +
3.28e-58FFCP PHASE1:Mm9::chr10:127165632..127165636,+#_72382d6040781dca916665d197df91a2p@chr10:127165632..127165636, +
3.28e-58FFCP PHASE2:Mm9::chr15:70621810..70621814,-#_72382d6040781dca916665d197df91a2p@chr15:70621810..70621814, -
3.28e-58FFCP PHASE2:Mm9::chr10:127165632..127165636,+#_72382d6040781dca916665d197df91a2p@chr10:127165632..127165636, +
3.28e-58FFCP PHASE1:Mm9::chr15:70621810..70621814,-#_72382d6040781dca916665d197df91a2p@chr15:70621810..70621814, -
3.28e-58FFCP PHASE2:Mm9::chr5:31350252..31350259,-#_72382d6040781dca916665d197df91a2p13@Slc5a6
3.28e-58FFCP PHASE1:Mm9::chr11:43412215..43412219,-#_72382d6040781dca916665d197df91a2p@chr11:43412215..43412219, -
3.28e-58FFCP PHASE2:Mm9::chr3:80191466..80191470,+#_72382d6040781dca916665d197df91a2p@chr3:80191466..80191470, +
4.9e-53FFCP PHASE2:Mm9::chr1:174032230..174032242,+#_4925534eed976c8a23d5c95c7932dbeap@chr1:174032230..174032242, +
4.9e-53FFCP PHASE1:Mm9::chr1:174032230..174032242,+#_4925534eed976c8a23d5c95c7932dbeap@chr1:174032230..174032242, +
1.1e-52FFCP PHASE2:Mm9::chr1:123242799..123242804,-#_da224bc0a9f93872b84844542583861cp@chr1:123242799..123242804, -
1.1e-52FFCP PHASE1:Mm9::chr1:123242799..123242804,-#_da224bc0a9f93872b84844542583861cp@chr1:123242799..123242804, -
5.51e-52FFCP PHASE2:Mm9::chr6:48417827..48417837,+#_01790920c99d37132054aaea494a1431p@chr6:48417827..48417837, +
5.51e-52FFCP PHASE1:Mm9::chr9:7692339..7692366,+#_01790920c99d37132054aaea494a1431p@chr9:7692339..7692366, +
5.51e-52FFCP PHASE2:Mm9::chr9:7692339..7692366,+#_01790920c99d37132054aaea494a1431p@chr9:7692339..7692366, +
5.51e-52FFCP PHASE1:Mm9::chr6:48417827..48417837,+#_01790920c99d37132054aaea494a1431p@chr6:48417827..48417837, +
1.18e-44FFCP PHASE2:Mm9::chr1:174032263..174032278,+#_99d8f7cca9e68cd9c919f3386031f315p@chr1:174032263..174032278, +
1.18e-44FFCP PHASE1:Mm9::chr1:174032263..174032278,+#_99d8f7cca9e68cd9c919f3386031f315p@chr1:174032263..174032278, +
1.66e-44FFCP PHASE2:Mm9::chr11:76730372..76730376,+#_9ecd0618901f9f7132eb2b938f061e75p@chr11:76730372..76730376, +
1.66e-44FFCP PHASE1:Mm9::chr11:76730372..76730376,+#_9ecd0618901f9f7132eb2b938f061e75p@chr11:76730372..76730376, +
2.33e-44FFCP PHASE2:Mm9::chr19:6114448..6114456,+#_d363b2206c4b88ee9d6b2831372d88f0p@chr19:6114448..6114456, +
2.33e-44FFCP PHASE1:Mm9::chr19:6114448..6114456,+#_d363b2206c4b88ee9d6b2831372d88f0p@chr19:6114448..6114456, +
2.33e-44FFCP PHASE2:Mm9::chr3:65610528..65610533,+#_d363b2206c4b88ee9d6b2831372d88f0p@chr3:65610528..65610533, +
2.33e-44FFCP PHASE1:Mm9::chr3:65610528..65610533,+#_d363b2206c4b88ee9d6b2831372d88f0p@chr3:65610528..65610533, +
1.7e-39FFCP PHASE1:Mm9::chr3:6169801..6169806,-#_f9ec6cdddca11c1874ad89c1258401aap@chr3:6169801..6169806, -
1.7e-39FFCP PHASE2:Mm9::chr3:6169801..6169806,-#_f9ec6cdddca11c1874ad89c1258401aap@chr3:6169801..6169806, -
2.66e-39FFCP PHASE2:Mm9::chr19:6112940..6112946,+#_db14a7b09d3557f3c2396c32ce8e3aadp@chr19:6112940..6112946, +
2.66e-39FFCP PHASE1:Mm9::chr19:6112940..6112946,+#_db14a7b09d3557f3c2396c32ce8e3aadp@chr19:6112940..6112946, +
4.15e-39FFCP PHASE1:Mm9::chr5:31350231..31350240,-#_c9cbeaf0cb176f5501765c53b7a33bccp12@Slc5a6
4.15e-39FFCP PHASE2:Mm9::chr5:31350231..31350240,-#_c9cbeaf0cb176f5501765c53b7a33bccp12@Slc5a6
1.17e-38FFCP PHASE1:Mm9::chr11:43412071..43412093,+#_3cf0366f637d514f2e3d1efea14daeb4p@chr11:43412071..43412093, +
1.17e-38FFCP PHASE2:Mm9::chr11:43412071..43412093,+#_3cf0366f637d514f2e3d1efea14daeb4p@chr11:43412071..43412093, +
1.56e-38FFCP PHASE1:Mm9::chr3:103636485..103636490,+#_4b62bce14af1bb801c498da6fc937050p3@Bcl2l15
1.56e-38FFCP PHASE2:Mm9::chr3:103636485..103636490,+#_4b62bce14af1bb801c498da6fc937050p3@Bcl2l15
3.67e-34FFCP PHASE1:Mm9::chr11:43412170..43412191,+#_292541f6a409c72cd4960ee32c54df10p@chr11:43412170..43412191, +
3.67e-34FFCP PHASE2:Mm9::chr11:43412170..43412191,+#_292541f6a409c72cd4960ee32c54df10p@chr11:43412170..43412191, +
4.74e-34FFCP PHASE2:Mm9::chr11:43409580..43409591,+#_c8172dd878c0037a3fd7d35a85f57800p@chr11:43409580..43409591, +
4.74e-34FFCP PHASE1:Mm9::chr11:43409580..43409591,+#_c8172dd878c0037a3fd7d35a85f57800p@chr11:43409580..43409591, +
6.12e-34FFCP PHASE1:Mm9::chr6:40578587..40578594,+#_81a2ead97c9b825d363c1bed0a367132p4@Mgam
6.12e-34FFCP PHASE2:Mm9::chr6:40578587..40578594,+#_81a2ead97c9b825d363c1bed0a367132p4@Mgam
1.02e-33FFCP PHASE1:Mm9::chr2:72453221..72453226,-#_2cd4eeecb8205000fa46606af961d431p@chr2:72453221..72453226, -
1.02e-33FFCP PHASE2:Mm9::chr2:72453221..72453226,-#_2cd4eeecb8205000fa46606af961d431p@chr2:72453221..72453226, -
1.31e-33FFCP PHASE2:Mm9::chr6:78323455..78323458,-#_6ba2dc760b509ff538168ca4416dbc02p@chr6:78323455..78323458, -
1.31e-33FFCP PHASE1:Mm9::chr6:78323455..78323458,-#_6ba2dc760b509ff538168ca4416dbc02p@chr6:78323455..78323458, -
1.31e-33FFCP PHASE2:Mm9::chr19:6112924..6112937,+#_6ba2dc760b509ff538168ca4416dbc02p@chr19:6112924..6112937, +
1.31e-33FFCP PHASE1:Mm9::chr19:6112924..6112937,+#_6ba2dc760b509ff538168ca4416dbc02p@chr19:6112924..6112937, +
2.89e-30FFCP PHASE1:Mm9::chr4:138388796..138388811,+#_216c8286e95aaa671e16795e38bab39bp3@ENSMUST00000147728
2.89e-30FFCP PHASE2:Mm9::chr4:138388796..138388811,+#_216c8286e95aaa671e16795e38bab39bp3@ENSMUST00000147728
4.03e-30FFCP PHASE1:Mm9::chr10:128109355..128109365,-#_7685f12cac0edf9eaa2ee4550a6bc767p@chr10:128109355..128109365, -
4.03e-30FFCP PHASE2:Mm9::chr10:128109355..128109365,-#_7685f12cac0edf9eaa2ee4550a6bc767p@chr10:128109355..128109365, -
4.03e-30FFCP PHASE2:Mm9::chr17:34484746..34484750,+#_7685f12cac0edf9eaa2ee4550a6bc767p@chr17:34484746..34484750, +
4.03e-30FFCP PHASE1:Mm9::chr17:34484746..34484750,+#_7685f12cac0edf9eaa2ee4550a6bc767p@chr17:34484746..34484750, +
5.61e-30FFCP PHASE1:Mm9::chr10:31111154..31111155,+#_d84ff8044478824f9c9dd38efc4288bfp@chr10:31111154..31111155, +
5.61e-30FFCP PHASE2:Mm9::chr11:106410939..106410940,+#_d84ff8044478824f9c9dd38efc4288bfp@chr11:106410939..106410940, +
5.61e-30FFCP PHASE1:Mm9::chr3:20879214..20879216,+#_d84ff8044478824f9c9dd38efc4288bfp@chr3:20879214..20879216, +
5.61e-30FFCP PHASE1:Mm9::chr11:106410939..106410940,+#_d84ff8044478824f9c9dd38efc4288bfp@chr11:106410939..106410940, +
5.61e-30FFCP PHASE2:Mm9::chr10:31111154..31111155,+#_d84ff8044478824f9c9dd38efc4288bfp@chr10:31111154..31111155, +
5.61e-30FFCP PHASE2:Mm9::chr13:55874724..55874725,-#_d84ff8044478824f9c9dd38efc4288bfp@chr13:55874724..55874725, -
5.61e-30FFCP PHASE1:Mm9::chr13:55874724..55874725,-#_d84ff8044478824f9c9dd38efc4288bfp@chr13:55874724..55874725, -
5.61e-30FFCP PHASE2:Mm9::chr8:5085607..5085611,-#_d84ff8044478824f9c9dd38efc4288bfp@chr8:5085607..5085611, -
5.61e-30FFCP PHASE1:Mm9::chr18:58306021..58306022,+#_d84ff8044478824f9c9dd38efc4288bfp@chr18:58306021..58306022, +
5.61e-30FFCP PHASE2:Mm9::chr9:50047835..50047836,+#_d84ff8044478824f9c9dd38efc4288bfp@chr9:50047835..50047836, +
5.61e-30FFCP PHASE1:Mm9::chr11:27472982..27472983,+#_d84ff8044478824f9c9dd38efc4288bfp@chr11:27472982..27472983, +
5.61e-30FFCP PHASE1:Mm9::chr11:9039303..9039304,+#_d84ff8044478824f9c9dd38efc4288bfp@chr11:9039303..9039304, +
5.61e-30FFCP PHASE2:Mm9::chr8:27020687..27020691,+#_d84ff8044478824f9c9dd38efc4288bfp@chr8:27020687..27020691, +
5.61e-30FFCP PHASE2:Mm9::chr11:27472982..27472983,+#_d84ff8044478824f9c9dd38efc4288bfp@chr11:27472982..27472983, +
5.61e-30FFCP PHASE1:Mm9::chr8:5085607..5085611,-#_d84ff8044478824f9c9dd38efc4288bfp@chr8:5085607..5085611, -
5.61e-30FFCP PHASE1:Mm9::chr17:4030939..4030944,-#_d84ff8044478824f9c9dd38efc4288bfp@chr17:4030939..4030944, -
5.61e-30FFCP PHASE2:Mm9::chr18:55496010..55496011,-#_d84ff8044478824f9c9dd38efc4288bfp@chr18:55496010..55496011, -
5.61e-30FFCP PHASE2:Mm9::chr13:17402712..17402716,+#_d84ff8044478824f9c9dd38efc4288bfp@chr13:17402712..17402716, +
5.61e-30FFCP PHASE2:Mm9::chr12:103615373..103615374,+#_d84ff8044478824f9c9dd38efc4288bfp@chr12:103615373..103615374, +
5.61e-30FFCP PHASE2:Mm9::chrX:83991903..83991905,-#_d84ff8044478824f9c9dd38efc4288bfp@chrX:83991903..83991905, -
5.61e-30FFCP PHASE2:Mm9::chr11:9039303..9039304,+#_d84ff8044478824f9c9dd38efc4288bfp@chr11:9039303..9039304, +
5.61e-30FFCP PHASE1:Mm9::chr13:17402712..17402716,+#_d84ff8044478824f9c9dd38efc4288bfp@chr13:17402712..17402716, +
5.61e-30FFCP PHASE1:Mm9::chr8:27020687..27020691,+#_d84ff8044478824f9c9dd38efc4288bfp@chr8:27020687..27020691, +
5.61e-30FFCP PHASE2:Mm9::chr17:4030939..4030944,-#_d84ff8044478824f9c9dd38efc4288bfp@chr17:4030939..4030944, -
5.61e-30FFCP PHASE2:Mm9::chr18:58306021..58306022,+#_d84ff8044478824f9c9dd38efc4288bfp@chr18:58306021..58306022, +
5.61e-30FFCP PHASE1:Mm9::chrX:68120720..68120723,-#_d84ff8044478824f9c9dd38efc4288bfp@chrX:68120720..68120723, -
5.61e-30FFCP PHASE1:Mm9::chr12:103615373..103615374,+#_d84ff8044478824f9c9dd38efc4288bfp@chr12:103615373..103615374, +
5.61e-30FFCP PHASE1:Mm9::chr4:72564746..72564750,-#_d84ff8044478824f9c9dd38efc4288bfp@chr4:72564746..72564750, -
5.61e-30FFCP PHASE2:Mm9::chr3:20879214..20879216,+#_d84ff8044478824f9c9dd38efc4288bfp@chr3:20879214..20879216, +
5.61e-30FFCP PHASE2:Mm9::chrX:68120720..68120723,-#_d84ff8044478824f9c9dd38efc4288bfp@chrX:68120720..68120723, -
5.61e-30FFCP PHASE1:Mm9::chr18:55496010..55496011,-#_d84ff8044478824f9c9dd38efc4288bfp@chr18:55496010..55496011, -
5.61e-30FFCP PHASE2:Mm9::chr4:72564746..72564750,-#_d84ff8044478824f9c9dd38efc4288bfp@chr4:72564746..72564750, -
5.61e-30FFCP PHASE1:Mm9::chr17:43614030..43614038,+#_d84ff8044478824f9c9dd38efc4288bfp@chr17:43614030..43614038, +
5.61e-30FFCP PHASE1:Mm9::chr1:40187318..40187321,-#_d84ff8044478824f9c9dd38efc4288bfp@chr1:40187318..40187321, -
5.61e-30FFCP PHASE1:Mm9::chr9:50047835..50047836,+#_d84ff8044478824f9c9dd38efc4288bfp@chr9:50047835..50047836, +
5.61e-30FFCP PHASE1:Mm9::chrX:83991903..83991905,-#_d84ff8044478824f9c9dd38efc4288bfp@chrX:83991903..83991905, -
5.61e-30FFCP PHASE2:Mm9::chr17:43614030..43614038,+#_d84ff8044478824f9c9dd38efc4288bfp@chr17:43614030..43614038, +
5.61e-30FFCP PHASE2:Mm9::chr1:40187318..40187321,-#_d84ff8044478824f9c9dd38efc4288bfp@chr1:40187318..40187321, -

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