UBERON:0002021: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 10: | Line 10: | ||
|has_quality= | |has_quality= | ||
|id=UBERON:0002021 | |id=UBERON:0002021 | ||
|is_a=UBERON: | |is_a=UBERON:0016526 | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=occipital lobe | |name=occipital lobe | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001950 | |part_of=UBERON:0001950 | ||
Latest revision as of 17:24, 12 September 2014
| Name: | occipital lobe | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Occipital lobe is the one of five lobes of the cerebral hemisphere which occupies the posterior-most portion of the hemisphere. Anteriorly, it shares an arbitrary border with the parietal lobe and temporal lobe. Medially, it is bounded by the longitudinal cerebral fissure." [Wikipedia:Occipital_lobe] | ||
| Xrefs: |
| ||
| Synonyms: |
"lobus occipitalis" RELATED LATIN [Wikipedia:Occipital_lobe] "occipital cortex" EXACT [] "occipital neocortex" EXACT [DHB:Ocx] "regio occipitalis" EXACT [FMA:67325, FMA:TA] | ||
| Alt_id: | UBERON:FMA_67325-MA_0000913-ZFA_0001414 | ||
| Subset: | uberon_slim |
Gray727_occipital_lobe.png]
200px-Gray727_occipital_lobe.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0016526(lobe of cerebral hemisphere) |
|---|---|
| part_of: | UBERON:0001950(neocortex) |
Children
| is a: | FF:0010163 (occipital cortex - adult donor),FF:10355-105E4 (occipital cortex, newborn, donor10223) |
|---|---|
| derives from: | FF:0010073 (human occipital lobe - fetal sample),FF:0010076 (human occipital lobe - adult sample) |
| part of: | UBERON:0000411 (visual cortex),UBERON:0002902 (occipital pole),FF:0010073 (human occipital lobe - fetal sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10036-101E9 (occipital pole, adult, pool1)
- 10073-102A1 (occipital lobe, fetal, donor1)
- 10076-102A4 (occipital lobe, adult, donor1)
- 10163-103B1 (occipital cortex, adult, donor10252)
- 10172-103C1 (occipital cortex - adult, donor10196)
- 10194-103E5
- 10235-104A1 (visual cortex - wildtype)
- 10236-104A2 (visual cortex - wildtype)
- 10237-104A3 (visual cortex - wildtype)
- 10238-104A4 (visual cortex - wildtype)
... further results Mouse (Mus musculus)
- 10036-101E9 (occipital pole, adult, pool1)
- 10073-102A1 (occipital lobe, fetal, donor1)
- 10076-102A4 (occipital lobe, adult, donor1)
- 10163-103B1 (occipital cortex, adult, donor10252)
- 10172-103C1 (occipital cortex - adult, donor10196)
- 10194-103E5
- 10235-104A1 (visual cortex - wildtype)
- 10236-104A2 (visual cortex - wildtype)
- 10237-104A3 (visual cortex - wildtype)
- 10238-104A4 (visual cortex - wildtype)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002021 (occipital lobe), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.76e-118 | FFCP PHASE1:Hg19::chr7:43152322..43152325,+#_ab0bd15c20e077874114454c0d8a9794 | p21@HECW1 |
| 7.76e-118 | FFCP PHASE2:Hg19::chr7:43152322..43152325,+#_ab0bd15c20e077874114454c0d8a9794 | p21@HECW1 |
| 7.76e-118 | FFCP PHASE2:Hg19::chr2:149679731..149679740,+#_ab0bd15c20e077874114454c0d8a9794 | p@chr2:149679731..149679740, + |
| 7.76e-118 | FFCP PHASE1:Hg19::chr2:149679731..149679740,+#_ab0bd15c20e077874114454c0d8a9794 | p@chr2:149679731..149679740, + |
| 8.85e-105 | FFCP PHASE1:Hg19::chr20:656395..656406,-#_7a000e6a610a7301b576ef1129ece8a0 | p7@SRXN1 |
| 8.85e-105 | FFCP PHASE2:Hg19::chr20:656395..656406,-#_7a000e6a610a7301b576ef1129ece8a0 | p7@SRXN1 |
| 1.4e-89 | FFCP PHASE1:Hg19::chr2:166051474..166051485,+#_69e6185869d7b9f047a140180b9bbc8d | p@chr2:166051474..166051485, + |
| 1.4e-89 | FFCP PHASE2:Hg19::chr2:166051474..166051485,+#_69e6185869d7b9f047a140180b9bbc8d | p@chr2:166051474..166051485, + |
| 1.31e-86 | FFCP PHASE1:Mm9::chr6:80020704..80020735,+#_2de7073c03996453449511e13e256197 | p@chr6:80020704..80020735, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr1:126404292..126404301,-#_2de7073c03996453449511e13e256197 | p@chr1:126404292..126404301, - |
| 1.31e-86 | FFCP PHASE2:Mm9::chr1:126400744..126400756,-#_2de7073c03996453449511e13e256197 | p@chr1:126400744..126400756, - |
| 1.31e-86 | FFCP PHASE1:Mm9::chr1:126400744..126400756,-#_2de7073c03996453449511e13e256197 | p@chr1:126400744..126400756, - |
| 1.31e-86 | FFCP PHASE1:Mm9::chr1:126404292..126404301,-#_2de7073c03996453449511e13e256197 | p@chr1:126404292..126404301, - |
| 1.31e-86 | FFCP PHASE1:Mm9::chr13:42849190..42849201,+#_2de7073c03996453449511e13e256197 | p@chr13:42849190..42849201, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr1:126502309..126502340,-#_2de7073c03996453449511e13e256197 | p@chr1:126502309..126502340, - |
| 1.31e-86 | FFCP PHASE1:Mm9::chr18:40430194..40430203,+#_2de7073c03996453449511e13e256197 | p@chr18:40430194..40430203, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr2:7223539..7223546,-#_2de7073c03996453449511e13e256197 | p@chr2:7223539..7223546, - |
| 1.31e-86 | FFCP PHASE2:Mm9::chr13:42849190..42849201,+#_2de7073c03996453449511e13e256197 | p@chr13:42849190..42849201, + |
| 1.31e-86 | FFCP PHASE1:Mm9::chr11:17100262..17100269,+#_2de7073c03996453449511e13e256197 | p@chr11:17100262..17100269, + |
| 1.31e-86 | FFCP PHASE1:Mm9::chr2:7223539..7223546,-#_2de7073c03996453449511e13e256197 | p@chr2:7223539..7223546, - |
| 1.31e-86 | FFCP PHASE1:Mm9::chr1:126502309..126502340,-#_2de7073c03996453449511e13e256197 | p@chr1:126502309..126502340, - |
| 1.31e-86 | FFCP PHASE2:Mm9::chr6:80020704..80020735,+#_2de7073c03996453449511e13e256197 | p@chr6:80020704..80020735, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr18:40430194..40430203,+#_2de7073c03996453449511e13e256197 | p@chr18:40430194..40430203, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr11:17100262..17100269,+#_2de7073c03996453449511e13e256197 | p@chr11:17100262..17100269, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr15:90809459..90809470,+#_8c1cf379e2d490b57d7220c8d46b8d23 | p16@NGRN |
| 3.49e-79 | FFCP PHASE2:Hg19::chr11:62476322..62476329,+#_8c1cf379e2d490b57d7220c8d46b8d23 | p@chr11:62476322..62476329, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr1:78024449..78024457,+#_8c1cf379e2d490b57d7220c8d46b8d23 | p@chr1:78024449..78024457, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr11:62476322..62476329,+#_8c1cf379e2d490b57d7220c8d46b8d23 | p@chr11:62476322..62476329, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr11:1579486..1579500,-#_8c1cf379e2d490b57d7220c8d46b8d23 | p@chr11:1579486..1579500, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr1:78024449..78024457,+#_8c1cf379e2d490b57d7220c8d46b8d23 | p@chr1:78024449..78024457, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr11:1579486..1579500,-#_8c1cf379e2d490b57d7220c8d46b8d23 | p@chr11:1579486..1579500, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr15:90809459..90809470,+#_8c1cf379e2d490b57d7220c8d46b8d23 | p16@NGRN |
| 3.9e-79 | FFCP PHASE1:Mm9::chr2:20291839..20291846,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr2:20291839..20291846, + |
| 3.9e-79 | FFCP PHASE1:Mm9::chr1:126400758..126400783,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126400758..126400783, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr7:52430433..52430443,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr7:52430433..52430443, + |
| 3.9e-79 | FFCP PHASE2:Mm9::chr1:126619902..126619921,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126619902..126619921, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr1:126400758..126400783,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126400758..126400783, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr4:76560610..76560659,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr4:76560610..76560659, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr4:77468821..77468823,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr4:77468821..77468823, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr4:77434471..77434475,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr4:77434471..77434475, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr1:126203760..126203764,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126203760..126203764, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr7:99597472..99597476,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr7:99597472..99597476, + |
| 3.9e-79 | FFCP PHASE1:Mm9::chr15:20450265..20450266,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr15:20450265..20450266, + |
| 3.9e-79 | FFCP PHASE2:Mm9::chr8:17186907..17186917,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr8:17186907..17186917, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr4:76560610..76560659,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr4:76560610..76560659, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr2:20291839..20291846,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr2:20291839..20291846, + |
| 3.9e-79 | FFCP PHASE2:Mm9::chr1:126104837..126104853,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126104837..126104853, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr1:126619902..126619921,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126619902..126619921, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr16:6986792..6986801,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr16:6986792..6986801, + |
| 3.9e-79 | FFCP PHASE1:Mm9::chr1:126105041..126105050,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126105041..126105050, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr7:90680238..90680241,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr7:90680238..90680241, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr7:52430433..52430443,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr7:52430433..52430443, + |
| 3.9e-79 | FFCP PHASE1:Mm9::chr4:77468821..77468823,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr4:77468821..77468823, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr1:126105041..126105050,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126105041..126105050, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr7:99597472..99597476,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr7:99597472..99597476, + |
| 3.9e-79 | FFCP PHASE2:Mm9::chr1:126203760..126203764,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126203760..126203764, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr4:77434471..77434475,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr4:77434471..77434475, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr8:17186907..17186917,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr8:17186907..17186917, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr1:126104837..126104853,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126104837..126104853, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr1:126652982..126652992,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126652982..126652992, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr1:126652982..126652992,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126652982..126652992, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr15:20450265..20450266,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr15:20450265..20450266, + |
| 3.9e-79 | FFCP PHASE2:Mm9::chr14:40201667..40201703,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr14:40201667..40201703, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr16:6986792..6986801,+#_2fe6713daead577b81d526ca6bf8e341 | p@chr16:6986792..6986801, + |
| 3.9e-79 | FFCP PHASE1:Mm9::chr14:40201667..40201703,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr14:40201667..40201703, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr1:126717072..126717109,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126717072..126717109, - |
| 3.9e-79 | FFCP PHASE2:Mm9::chr7:90680238..90680241,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr7:90680238..90680241, - |
| 3.9e-79 | FFCP PHASE1:Mm9::chr1:126717072..126717109,-#_2fe6713daead577b81d526ca6bf8e341 | p@chr1:126717072..126717109, - |
| 4.7e-79 | FFCP PHASE1:Mm9::chr1:126619952..126619959,-#_4058c4bea528823925d1a8001bc80db5 | p@chr1:126619952..126619959, - |
| 4.7e-79 | FFCP PHASE2:Mm9::chr1:126619952..126619959,-#_4058c4bea528823925d1a8001bc80db5 | p@chr1:126619952..126619959, - |
| 4.7e-79 | FFCP PHASE1:Mm9::chr9:37352150..37352163,-#_4058c4bea528823925d1a8001bc80db5 | p@chr9:37352150..37352163, - |
| 4.7e-79 | FFCP PHASE1:Mm9::chr4:126885535..126885547,+#_4058c4bea528823925d1a8001bc80db5 | p@chr4:126885535..126885547, + |
| 4.7e-79 | FFCP PHASE2:Mm9::chr4:126885535..126885547,+#_4058c4bea528823925d1a8001bc80db5 | p@chr4:126885535..126885547, + |
| 4.7e-79 | FFCP PHASE2:Mm9::chr9:37352150..37352163,-#_4058c4bea528823925d1a8001bc80db5 | p@chr9:37352150..37352163, - |
| 5.66e-79 | FFCP PHASE2:Mm9::chr1:126404318..126404329,-#_7c2ec81d55fa2df4d5a0b67f15334ee0 | p@chr1:126404318..126404329, - |
| 5.66e-79 | FFCP PHASE1:Mm9::chr2:129870267..129870276,+#_7c2ec81d55fa2df4d5a0b67f15334ee0 | p@chr2:129870267..129870276, + |
| 5.66e-79 | FFCP PHASE1:Mm9::chr1:126404318..126404329,-#_7c2ec81d55fa2df4d5a0b67f15334ee0 | p@chr1:126404318..126404329, - |
| 5.66e-79 | FFCP PHASE2:Mm9::chr2:129870267..129870276,+#_7c2ec81d55fa2df4d5a0b67f15334ee0 | p@chr2:129870267..129870276, + |
| 6.82e-79 | FFCP PHASE2:Mm9::chr18:40431328..40431331,+#_227af380cf23c2598a76976160d70f6a | p@chr18:40431328..40431331, + |
| 6.82e-79 | FFCP PHASE1:Mm9::chr18:40431328..40431331,+#_227af380cf23c2598a76976160d70f6a | p@chr18:40431328..40431331, + |
| 1.59e-78 | FFCP PHASE2:Hg19::chr2:50215753..50215758,-#_cb56a4ee1d72feffb047f7f06a83b8e9 | p@chr2:50215753..50215758, - |
| 1.59e-78 | FFCP PHASE1:Hg19::chr2:50215753..50215758,-#_cb56a4ee1d72feffb047f7f06a83b8e9 | p@chr2:50215753..50215758, - |
| 5.74e-78 | FFCP PHASE2:Mm9::chr9:37353524..37353532,+#_8afe1529c40b87b914d7b393d5068553 | p@chr9:37353524..37353532, + |
| 5.74e-78 | FFCP PHASE2:Mm9::chr2:42019112..42019120,-#_8afe1529c40b87b914d7b393d5068553 | p@chr2:42019112..42019120, - |
| 5.74e-78 | FFCP PHASE2:Mm9::chr7:64568462..64568466,-#_8afe1529c40b87b914d7b393d5068553 | p@chr7:64568462..64568466, - |
| 5.74e-78 | FFCP PHASE2:Mm9::chr16:75308220..75308224,-#_8afe1529c40b87b914d7b393d5068553 | p@chr16:75308220..75308224, - |
| 5.74e-78 | FFCP PHASE2:Mm9::chr15:20964798..20964802,+#_8afe1529c40b87b914d7b393d5068553 | p@chr15:20964798..20964802, + |
| 5.74e-78 | FFCP PHASE1:Mm9::chr7:98325289..98325298,+#_8afe1529c40b87b914d7b393d5068553 | p@chr7:98325289..98325298, + |
| 5.74e-78 | FFCP PHASE1:Mm9::chr10:109586641..109586671,-#_8afe1529c40b87b914d7b393d5068553 | p@chr10:109586641..109586671, - |
| 5.74e-78 | FFCP PHASE1:Mm9::chr15:20964798..20964802,+#_8afe1529c40b87b914d7b393d5068553 | p@chr15:20964798..20964802, + |
| 5.74e-78 | FFCP PHASE1:Mm9::chr4:76204951..76204975,-#_8afe1529c40b87b914d7b393d5068553 | p@chr4:76204951..76204975, - |
| 5.74e-78 | FFCP PHASE2:Mm9::chr1:126099259..126099261,-#_8afe1529c40b87b914d7b393d5068553 | p@chr1:126099259..126099261, - |
| 5.74e-78 | FFCP PHASE1:Mm9::chr16:75308220..75308224,-#_8afe1529c40b87b914d7b393d5068553 | p@chr16:75308220..75308224, - |
| 5.74e-78 | FFCP PHASE2:Mm9::chr1:126461420..126461468,-#_8afe1529c40b87b914d7b393d5068553 | p@chr1:126461420..126461468, - |
| 5.74e-78 | FFCP PHASE2:Mm9::chr1:126136825..126136836,-#_8afe1529c40b87b914d7b393d5068553 | p@chr1:126136825..126136836, - |
| 5.74e-78 | FFCP PHASE1:Mm9::chr4:138013853..138013861,+#_8afe1529c40b87b914d7b393d5068553 | p@chr4:138013853..138013861, + |
| 5.74e-78 | FFCP PHASE2:Mm9::chr6:110711128..110711143,+#_8afe1529c40b87b914d7b393d5068553 | p@chr6:110711128..110711143, + |
| 5.74e-78 | FFCP PHASE1:Mm9::chr1:126136825..126136836,-#_8afe1529c40b87b914d7b393d5068553 | p@chr1:126136825..126136836, - |
| 5.74e-78 | FFCP PHASE2:Mm9::chr1:156389511..156389544,-#_8afe1529c40b87b914d7b393d5068553 | p@chr1:156389511..156389544, - |
| 5.74e-78 | FFCP PHASE2:Mm9::chr6:102215690..102215693,-#_8afe1529c40b87b914d7b393d5068553 | p@chr6:102215690..102215693, - |
