UBERON:0002771: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=middle temporal gyrus | |name=middle temporal gyrus | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001871 | |part_of=UBERON:0001871 | ||
Latest revision as of 17:34, 12 September 2014
| Name: | middle temporal gyrus | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Middle temporal gyrus is a gyrus in the brain on the Temporal lobe. It is located between the superior temporal gyrus and inferior temporal gyrus. Its exact function is unknown, but it has been connected with processes as different as contemplating distance, recognition of known faces, and accessing word meaning while reading. [WP,unvetted]." [Wikipedia:Middle_temporal_gyrus] | ||
| Xrefs: |
| ||
| Synonyms: |
"gyrus temporalis medius" EXACT [NIF_GrossAnatomy:birnlex_1653] "intermediate temporal gyrus" EXACT [FMA:61906] "medial temporal gyrus" RELATED [Wikipedia:Middle_temporal_gyrus] | ||
| Alt_id: | UBERON:NIF_GrossAnatomy_birnlex_1653-FMA_61906 | ||
| Subset: | uberon_slim |
WOROI_60_loc.png]
200px-WOROI_60_loc.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000200(gyrus) |
|---|---|
| part_of: | UBERON:0001871(temporal lobe) |
Children
| is a: | FF:10353-105E2 (medial temporal gyrus, newborn, donor10223) |
|---|---|
| derives from: | FF:0010150 (human medial temporal gyrus - adult sample),FF:0010156 (human medial temporal gyrus donor sample) |
| part of: | FF:0010156 (human medial temporal gyrus donor sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10156-103A3 (medial temporal gyrus, adult, donor10252)
- 10183-103D3 (medial temporal gyrus - adult, donor10196)
- 10353-105E2 (medial temporal gyrus, newborn, donor10223)
- 10376-105G7 (medial temporal gyrus, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002771 (middle temporal gyrus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.38e-99 | FFCP PHASE2:Hg19::chr6:110499950..110499962,-#_1c36568b57ced2db6c9974d2ce088c22 | p12@WASF1 |
| 9.38e-99 | FFCP PHASE1:Hg19::chr6:110499950..110499962,-#_1c36568b57ced2db6c9974d2ce088c22 | p12@WASF1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:133547522..133547529,-#_8a9c778c7b208a6503a4245e01036235 | p@chr3:133547522..133547529, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:49015640..49015642,-#_8a9c778c7b208a6503a4245e01036235 | p@chr19:49015640..49015642, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:91968295..91968306,+#_8a9c778c7b208a6503a4245e01036235 | p@chr8:91968295..91968306, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:40854879..40854883,+#_8a9c778c7b208a6503a4245e01036235 | p@chr19:40854879..40854883, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:167507102..167507119,+#_8a9c778c7b208a6503a4245e01036235 | p@chr3:167507102..167507119, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:210558105..210558113,+#_8a9c778c7b208a6503a4245e01036235 | p86@MAP2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:72434069..72434079,-#_8a9c778c7b208a6503a4245e01036235 | p9@NAP1L2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:166168555..166168565,+#_8a9c778c7b208a6503a4245e01036235 | p@chr2:166168555..166168565, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:8719908..8719916,+#_8a9c778c7b208a6503a4245e01036235 | p@chr20:8719908..8719916, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:48752748..48752755,-#_8a9c778c7b208a6503a4245e01036235 | p@chr8:48752748..48752755, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:46307645..46307654,-#_8a9c778c7b208a6503a4245e01036235 | p27@GABRA2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:143586373..143586390,+#_8a9c778c7b208a6503a4245e01036235 | p11@KCTD16 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:93375695..93375703,-#_8a9c778c7b208a6503a4245e01036235 | p7@DIRAS2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr21:22804424..22804428,+#_8a9c778c7b208a6503a4245e01036235 | p@chr21:22804424..22804428, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:55942972..55942977,-#_8a9c778c7b208a6503a4245e01036235 | p8@SHISA7 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:87486781..87486786,+#_8a9c778c7b208a6503a4245e01036235 | p@chr9:87486781..87486786, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:143586373..143586390,+#_8a9c778c7b208a6503a4245e01036235 | p11@KCTD16 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:58147206..58147213,+#_8a9c778c7b208a6503a4245e01036235 | p@chr5:58147206..58147213, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:24809278..24809290,-#_8a9c778c7b208a6503a4245e01036235 | p7@NEFL |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:86119561..86119570,+#_8a9c778c7b208a6503a4245e01036235 | p16@CADM2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:23825956..23825963,-#_8a9c778c7b208a6503a4245e01036235 | p21@ELAVL2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:88016570..88016576,-#_8a9c778c7b208a6503a4245e01036235 | p@chr5:88016570..88016576, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:167507102..167507119,+#_8a9c778c7b208a6503a4245e01036235 | p@chr3:167507102..167507119, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:23825956..23825963,-#_8a9c778c7b208a6503a4245e01036235 | p21@ELAVL2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:102270226..102270233,-#_8a9c778c7b208a6503a4245e01036235 | p@chr1:102270226..102270233, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:210558105..210558113,+#_8a9c778c7b208a6503a4245e01036235 | p86@MAP2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:48752748..48752755,-#_8a9c778c7b208a6503a4245e01036235 | p@chr8:48752748..48752755, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:72434069..72434079,-#_8a9c778c7b208a6503a4245e01036235 | p9@NAP1L2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:166168555..166168565,+#_8a9c778c7b208a6503a4245e01036235 | p@chr2:166168555..166168565, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:125672383..125672386,+#_8a9c778c7b208a6503a4245e01036235 | p@chr2:125672383..125672386, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:46307645..46307654,-#_8a9c778c7b208a6503a4245e01036235 | p27@GABRA2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:87023078..87023086,-#_8a9c778c7b208a6503a4245e01036235 | p34@MAPK10 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:87486781..87486786,+#_8a9c778c7b208a6503a4245e01036235 | p@chr9:87486781..87486786, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:24809278..24809290,-#_8a9c778c7b208a6503a4245e01036235 | p7@NEFL |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:86119561..86119570,+#_8a9c778c7b208a6503a4245e01036235 | p16@CADM2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:33410974..33410976,+#_8a9c778c7b208a6503a4245e01036235 | p@chr6:33410974..33410976, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:88016570..88016576,-#_8a9c778c7b208a6503a4245e01036235 | p@chr5:88016570..88016576, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:40854879..40854883,+#_8a9c778c7b208a6503a4245e01036235 | p@chr19:40854879..40854883, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:187618662..187618667,+#_8a9c778c7b208a6503a4245e01036235 | p@chr2:187618662..187618667, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:102270265..102270271,-#_8a9c778c7b208a6503a4245e01036235 | p@chr1:102270265..102270271, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:116066853..116066863,+#_8a9c778c7b208a6503a4245e01036235 | p21@DPP10 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:87023078..87023086,-#_8a9c778c7b208a6503a4245e01036235 | p34@MAPK10 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:49015640..49015642,-#_8a9c778c7b208a6503a4245e01036235 | p@chr19:49015640..49015642, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr21:22804424..22804428,+#_8a9c778c7b208a6503a4245e01036235 | p@chr21:22804424..22804428, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:161524744..161524748,+#_8a9c778c7b208a6503a4245e01036235 | p@chr5:161524744..161524748, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:33410974..33410976,+#_8a9c778c7b208a6503a4245e01036235 | p@chr6:33410974..33410976, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:62885800..62885809,-#_8a9c778c7b208a6503a4245e01036235 | p@chrX:62885800..62885809, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:187618662..187618667,+#_8a9c778c7b208a6503a4245e01036235 | p@chr2:187618662..187618667, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:175664741..175664750,-#_8a9c778c7b208a6503a4245e01036235 | p@chr2:175664741..175664750, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:102270226..102270233,-#_8a9c778c7b208a6503a4245e01036235 | p@chr1:102270226..102270233, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:8719908..8719916,+#_8a9c778c7b208a6503a4245e01036235 | p@chr20:8719908..8719916, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:191860453..191860457,-#_8a9c778c7b208a6503a4245e01036235 | p@chr3:191860453..191860457, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:7709385..7709396,+#_8a9c778c7b208a6503a4245e01036235 | p@chr5:7709385..7709396, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:175664741..175664750,-#_8a9c778c7b208a6503a4245e01036235 | p@chr2:175664741..175664750, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:55942972..55942977,-#_8a9c778c7b208a6503a4245e01036235 | p8@SHISA7 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:152695657..152695664,-#_8a9c778c7b208a6503a4245e01036235 | p@chr2:152695657..152695664, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:62885800..62885809,-#_8a9c778c7b208a6503a4245e01036235 | p@chrX:62885800..62885809, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:161524744..161524748,+#_8a9c778c7b208a6503a4245e01036235 | p@chr5:161524744..161524748, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:91968295..91968306,+#_8a9c778c7b208a6503a4245e01036235 | p@chr8:91968295..91968306, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:133547522..133547529,-#_8a9c778c7b208a6503a4245e01036235 | p@chr3:133547522..133547529, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:191860453..191860457,-#_8a9c778c7b208a6503a4245e01036235 | p@chr3:191860453..191860457, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:7709385..7709396,+#_8a9c778c7b208a6503a4245e01036235 | p@chr5:7709385..7709396, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:175664821..175664830,-#_8a9c778c7b208a6503a4245e01036235 | p@chr2:175664821..175664830, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:102270265..102270271,-#_8a9c778c7b208a6503a4245e01036235 | p@chr1:102270265..102270271, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:125672383..125672386,+#_8a9c778c7b208a6503a4245e01036235 | p@chr2:125672383..125672386, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr18:34824762..34824771,-#_8a9c778c7b208a6503a4245e01036235 | p@chr18:34824762..34824771, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr18:34824762..34824771,-#_8a9c778c7b208a6503a4245e01036235 | p@chr18:34824762..34824771, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:175664821..175664830,-#_8a9c778c7b208a6503a4245e01036235 | p@chr2:175664821..175664830, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:116066853..116066863,+#_8a9c778c7b208a6503a4245e01036235 | p21@DPP10 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:58147206..58147213,+#_8a9c778c7b208a6503a4245e01036235 | p@chr5:58147206..58147213, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:152695657..152695664,-#_8a9c778c7b208a6503a4245e01036235 | p@chr2:152695657..152695664, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:93375695..93375703,-#_8a9c778c7b208a6503a4245e01036235 | p7@DIRAS2 |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:82945999..82946010,+#_db3514cd49a6afcf241102de838a35f0 | p@chr8:82945999..82946010, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:82945999..82946010,+#_db3514cd49a6afcf241102de838a35f0 | p@chr8:82945999..82946010, + |
| 1.56e-79 | FFCP PHASE1:Hg19::chr17:29623072..29623083,-#_0783024ceaec0249d0a59d1ba2d0821c | p4@OMG |
| 1.56e-79 | FFCP PHASE2:Hg19::chr17:29623072..29623083,-#_0783024ceaec0249d0a59d1ba2d0821c | p4@OMG |
| 3.49e-79 | FFCP PHASE1:Hg19::chr12:79845142..79845155,+#_2048bc984642287599c931da17fb4c52 | p22@SYT1 |
| 3.49e-79 | FFCP PHASE2:Hg19::chr12:79845142..79845155,+#_2048bc984642287599c931da17fb4c52 | p22@SYT1 |
| 5.22e-79 | FFCP PHASE1:Hg19::chr4:118292669..118292678,+#_decada432782fdb7289e25c5c18da7a9 | p@chr4:118292669..118292678, + |
| 5.22e-79 | FFCP PHASE2:Hg19::chr4:118292669..118292678,+#_decada432782fdb7289e25c5c18da7a9 | p@chr4:118292669..118292678, + |
| 7.41e-67 | FFCP PHASE1:Hg19::chr3:179342188..179342199,+#_ead869929b2e425c1598f859c8550b2a | p@chr3:179342188..179342199, + |
| 7.41e-67 | FFCP PHASE2:Hg19::chr3:179342188..179342199,+#_ead869929b2e425c1598f859c8550b2a | p@chr3:179342188..179342199, + |
| 1.45e-66 | FFCP PHASE1:Hg19::chr10:102089952..102089973,-#_0d768699424badc4723d9872bc054647 | p2@PKD2L1 |
| 1.45e-66 | FFCP PHASE2:Hg19::chr12:57979967..57979978,+#_0d768699424badc4723d9872bc054647 | p13@KIF5A |
| 1.45e-66 | FFCP PHASE2:Hg19::chr10:102089952..102089973,-#_0d768699424badc4723d9872bc054647 | p2@PKD2L1 |
| 1.45e-66 | FFCP PHASE1:Hg19::chr9:93374840..93374853,-#_0d768699424badc4723d9872bc054647 | p5@DIRAS2 |
| 1.45e-66 | FFCP PHASE1:Hg19::chr12:57979967..57979978,+#_0d768699424badc4723d9872bc054647 | p13@KIF5A |
| 1.45e-66 | FFCP PHASE2:Hg19::chr9:93374840..93374853,-#_0d768699424badc4723d9872bc054647 | p5@DIRAS2 |
| 2.84e-66 | FFCP PHASE1:Hg19::chr13:53938493..53938506,+#_9de7d5d428954e577bc7f166fbca3b32 | p@chr13:53938493..53938506, + |
| 2.84e-66 | FFCP PHASE2:Hg19::chr13:53938493..53938506,+#_9de7d5d428954e577bc7f166fbca3b32 | p@chr13:53938493..53938506, + |
| 3.96e-66 | FFCP PHASE2:Hg19::chr8:143271384..143271387,+#_53d44af3495edc87169a8540fc06522e | p@chr8:143271384..143271387, + |
| 3.96e-66 | FFCP PHASE1:Hg19::chr8:143271384..143271387,+#_53d44af3495edc87169a8540fc06522e | p@chr8:143271384..143271387, + |
| 1.51e-57 | FFCP PHASE1:Hg19::chr1:183219137..183219155,-#_8391ac4c568c40c923b636f087507b87 | p11@NMNAT2 |
| 1.51e-57 | FFCP PHASE1:Hg19::chr12:57969424..57969435,+#_8391ac4c568c40c923b636f087507b87 | p@chr12:57969424..57969435, + |
| 1.51e-57 | FFCP PHASE1:Hg19::chr3:133100631..133100639,-#_8391ac4c568c40c923b636f087507b87 | p@chr3:133100631..133100639, - |
| 1.51e-57 | FFCP PHASE2:Hg19::chr1:183219137..183219155,-#_8391ac4c568c40c923b636f087507b87 | p11@NMNAT2 |
| 1.51e-57 | FFCP PHASE2:Hg19::chr3:133100631..133100639,-#_8391ac4c568c40c923b636f087507b87 | p@chr3:133100631..133100639, - |
| 1.51e-57 | FFCP PHASE2:Hg19::chr12:57969424..57969435,+#_8391ac4c568c40c923b636f087507b87 | p@chr12:57969424..57969435, + |
