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{{UBERON
{{UBERON
|id=UBERON:0004089
|alt_id=
|name=midface
|namespace=
|def="the middle of the face including the nose and its associated bony structures[MW]." [HP:0000309, http://www.merriam-webster.com/medical/midface]
|xref=MA:0001910
|is_a=UBERON:0000061
|synonym="lower face" RELATED [];;"midface/lower face" RELATED [];;"snout" RELATED SENSU [MA:0001910]
|comment=editors note: this class is currently a union of the snout (e.g. in mouse), the midface and the lower face. Note that in MA, snout includes the whole jaw and should thus be more alike the lower face than the midface, so its placement here is not strictly accurate. In future we might introduce specific classes for each of these, and include the full parthood relationships. if this is done, then care should be taken to preserve inferences such as an abnormality of the lower face being an abnormality of the midface.
|comment=editors note: this class is currently a union of the snout (e.g. in mouse), the midface and the lower face. Note that in MA, snout includes the whole jaw and should thus be more alike the lower face than the midface, so its placement here is not strictly accurate. In future we might introduce specific classes for each of these, and include the full parthood relationships. if this is done, then care should be taken to preserve inferences such as an abnormality of the lower face being an abnormality of the midface.
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="the middle of the face including the nose and its associated bony structures[MW]." [HP:0000309, http://www.merriam-webster.com/medical/midface]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004089
|is_a=UBERON:0001444
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=midface
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001456
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="lower face" RELATED [];;"midface/lower face" RELATED [];;"snout" RELATED SENSU [MA:0001910]
|union_of=
|xref=MA:0001910
}}
}}

Latest revision as of 17:43, 12 September 2014

Name:midface
Namespace:FANTOM
Definition:"the middle of the face including the nose and its associated bony structures[MW]." [HP:0000309, http://www.merriam-webster.com/medical/midface]
Xrefs:
links:
MA:0001910
Synonyms: "lower face" RELATED []
"midface/lower face" RELATED []
"snout" RELATED SENSU [MA:0001910]
Comments:editors note: this class is currently a union of the snout (e.g. in mouse), the midface and the lower face. Note that in MA, snout includes the whole jaw and should thus be more alike the lower face than the midface, so its placement here is not strictly accurate. In future we might introduce specific classes for each of these, and include the full parthood relationships. if this is done, then care should be taken to preserve inferences such as an abnormality of the lower face being an abnormality of the midface.

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001444(subdivision of head)
part_of:UBERON:0001456(face)



Children

part of:UBERON:0000004 (olfactory apparatus),UBERON:0001567 (cheek),UBERON:0001709 (upper jaw region)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004089 (midface), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr12:11463289..11463293,-#_df04e4fef314a9e91c86d5cd2b9475d3p6@PRB4
1.55e-98FFCP PHASE2:Hg19::chr1:104159538..104159544,+#_df04e4fef314a9e91c86d5cd2b9475d3p1@AMY2A
1.55e-98FFCP PHASE1:Hg19::chr12:11418889..11418902,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11418889..11418902, +
1.55e-98FFCP PHASE2:Hg19::chr12:11463289..11463293,-#_df04e4fef314a9e91c86d5cd2b9475d3p6@PRB4
1.55e-98FFCP PHASE1:Hg19::chr18:71497412..71497417,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr18:71497412..71497417, +
1.55e-98FFCP PHASE1:Hg19::chr12:11545967..11545972,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11545967..11545972, -
1.55e-98FFCP PHASE1:Hg19::chr12:11461215..11461224,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461215..11461224, -
1.55e-98FFCP PHASE1:Hg19::chr15:80254543..80254548,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr15:80254543..80254548, +
1.55e-98FFCP PHASE2:Hg19::chr12:11545967..11545972,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11545967..11545972, -
1.55e-98FFCP PHASE1:Hg19::chr3:42897816..42897822,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr3:42897816..42897822, +
1.55e-98FFCP PHASE2:Hg19::chr15:80254543..80254548,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr15:80254543..80254548, +
1.55e-98FFCP PHASE2:Hg19::chr12:11460043..11460048,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11460043..11460048, +
1.55e-98FFCP PHASE1:Hg19::chr12:11506888..11506910,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506888..11506910, +
1.55e-98FFCP PHASE2:Hg19::chr4:155178848..155178852,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr4:155178848..155178852, +
1.55e-98FFCP PHASE2:Hg19::chr12:11506888..11506910,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506888..11506910, +
1.55e-98FFCP PHASE2:Hg19::chr16:16196292..16196300,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr16:16196292..16196300, +
1.55e-98FFCP PHASE2:Hg19::chr12:11461279..11461288,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461279..11461288, -
1.55e-98FFCP PHASE1:Hg19::chr12:11506643..11506654,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506643..11506654, +
1.55e-98FFCP PHASE2:Hg19::chr12:11506643..11506654,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506643..11506654, +
1.55e-98FFCP PHASE1:Hg19::chr12:11548496..11548505,-#_df04e4fef314a9e91c86d5cd2b9475d3p10@PRB2, p1@PRB1
1.55e-98FFCP PHASE1:Hg19::chr16:16196292..16196300,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr16:16196292..16196300, +
1.55e-98FFCP PHASE2:Hg19::chr12:11548496..11548505,-#_df04e4fef314a9e91c86d5cd2b9475d3p10@PRB2, p1@PRB1
1.55e-98FFCP PHASE1:Hg19::chr12:11463525..11463554,-#_df04e4fef314a9e91c86d5cd2b9475d3p4@PRB4
1.55e-98FFCP PHASE2:Hg19::chr3:55350938..55350945,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr3:55350938..55350945, +
1.55e-98FFCP PHASE1:Hg19::chr4:155178848..155178852,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr4:155178848..155178852, +
1.55e-98FFCP PHASE2:Hg19::chr12:11463525..11463554,-#_df04e4fef314a9e91c86d5cd2b9475d3p4@PRB4
1.55e-98FFCP PHASE1:Hg19::chr12:11546479..11546495,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11546479..11546495, +
1.55e-98FFCP PHASE2:Hg19::chr3:141482175..141482178,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr3:141482175..141482178, -
1.55e-98FFCP PHASE2:Hg19::chr12:11546479..11546495,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11546479..11546495, +
1.55e-98FFCP PHASE1:Hg19::chr12:11461798..11461802,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461798..11461802, -
1.55e-98FFCP PHASE2:Hg19::chr9:3971778..3971783,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr9:3971778..3971783, +
1.55e-98FFCP PHASE2:Hg19::chr12:11461798..11461802,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461798..11461802, -
1.55e-98FFCP PHASE1:Hg19::chr12:11461145..11461156,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461145..11461156, +
1.55e-98FFCP PHASE1:Hg19::chr20:25647072..25647079,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr20:25647072..25647079, +
1.55e-98FFCP PHASE2:Hg19::chr12:11461374..11461409,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461374..11461409, +
1.55e-98FFCP PHASE1:Hg19::chr12:11506765..11506778,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506765..11506778, +
1.55e-98FFCP PHASE2:Hg19::chrX:32229061..32229062,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chrX:32229061..32229062, -
1.55e-98FFCP PHASE2:Hg19::chr12:11506765..11506778,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506765..11506778, +
1.55e-98FFCP PHASE1:Hg19::chr2:207365716..207365733,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr2:207365716..207365733, +
1.55e-98FFCP PHASE1:Hg19::chr12:11461374..11461409,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461374..11461409, +
1.55e-98FFCP PHASE2:Hg19::chr1:27652675..27652684,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr1:27652675..27652684, +
1.55e-98FFCP PHASE2:Hg19::chr12:11461203..11461212,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461203..11461212, -
1.55e-98FFCP PHASE1:Hg19::chr12:11506400..11506433,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506400..11506433, -
1.55e-98FFCP PHASE2:Hg19::chr2:64121005..64121007,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr2:64121005..64121007, +
1.55e-98FFCP PHASE2:Hg19::chr12:11506400..11506433,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506400..11506433, -
1.55e-98FFCP PHASE1:Hg19::chr12:11546872..11546887,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11546872..11546887, +
1.55e-98FFCP PHASE2:Hg19::chr12:11418847..11418863,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11418847..11418863, +
1.55e-98FFCP PHASE2:Hg19::chr12:11546872..11546887,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11546872..11546887, +
1.55e-98FFCP PHASE1:Hg19::chr1:73249728..73249729,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr1:73249728..73249729, +
1.55e-98FFCP PHASE1:Hg19::chr12:11463302..11463306,-#_df04e4fef314a9e91c86d5cd2b9475d3p3@PRB4
1.55e-98FFCP PHASE2:Hg19::chr20:38579074..38579083,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr20:38579074..38579083, -
1.55e-98FFCP PHASE2:Hg19::chr12:11463302..11463306,-#_df04e4fef314a9e91c86d5cd2b9475d3p3@PRB4
1.55e-98FFCP PHASE1:Hg19::chr12:11546098..11546121,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11546098..11546121, +
1.55e-98FFCP PHASE1:Hg19::chr12:11461234..11461250,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461234..11461250, -
1.55e-98FFCP PHASE1:Hg19::chr1:27652675..27652684,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr1:27652675..27652684, +
1.55e-98FFCP PHASE2:Hg19::chr12:11546098..11546121,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11546098..11546121, +
1.55e-98FFCP PHASE1:Hg19::chr1:104159538..104159544,+#_df04e4fef314a9e91c86d5cd2b9475d3p1@AMY2A
1.55e-98FFCP PHASE2:Hg19::chr12:11460065..11460082,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11460065..11460082, +
1.55e-98FFCP PHASE2:Hg19::chr3:193523505..193523508,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr3:193523505..193523508, -
1.55e-98FFCP PHASE2:Hg19::chr5:131707604..131707608,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr5:131707604..131707608, -
1.55e-98FFCP PHASE2:Hg19::chr17:68473195..68473200,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr17:68473195..68473200, -
1.55e-98FFCP PHASE2:Hg19::chr12:11461556..11461561,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461556..11461561, +
1.55e-98FFCP PHASE1:Hg19::chr12:11506903..11506911,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506903..11506911, -
1.55e-98FFCP PHASE2:Hg19::chr5:159266819..159266827,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr5:159266819..159266827, -
1.55e-98FFCP PHASE2:Hg19::chr4:156244563..156244567,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr4:156244563..156244567, -
1.55e-98FFCP PHASE2:Hg19::chr12:11506903..11506911,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506903..11506911, -
1.55e-98FFCP PHASE1:Hg19::chr12:11461556..11461561,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461556..11461561, +
1.55e-98FFCP PHASE2:Hg19::chr12:11461288..11461303,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461288..11461303, +
1.55e-98FFCP PHASE1:Hg19::chr12:11506657..11506679,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506657..11506679, -
1.55e-98FFCP PHASE2:Hg19::chr12:11506657..11506679,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506657..11506679, -
1.55e-98FFCP PHASE2:Hg19::chr7:84940118..84940122,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr7:84940118..84940122, +
1.55e-98FFCP PHASE1:Hg19::chr11:111114722..111114730,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr11:111114722..111114730, +
1.55e-98FFCP PHASE1:Hg19::chr5:159266819..159266827,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr5:159266819..159266827, -
1.55e-98FFCP PHASE1:Hg19::chr12:11504757..11504776,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11504757..11504776, +
1.55e-98FFCP PHASE1:Hg19::chr4:156244563..156244567,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr4:156244563..156244567, -
1.55e-98FFCP PHASE2:Hg19::chr12:11504757..11504776,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11504757..11504776, +
1.55e-98FFCP PHASE1:Hg19::chr3:141482175..141482178,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr3:141482175..141482178, -
1.55e-98FFCP PHASE1:Hg19::chr12:11546512..11546529,-#_df04e4fef314a9e91c86d5cd2b9475d3p2@PRB2
1.55e-98FFCP PHASE2:Hg19::chr12:11085174..11085180,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11085174..11085180, +
1.55e-98FFCP PHASE1:Hg19::chr12:11461323..11461331,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461323..11461331, +
1.55e-98FFCP PHASE2:Hg19::chr12:11546512..11546529,-#_df04e4fef314a9e91c86d5cd2b9475d3p2@PRB2
1.55e-98FFCP PHASE1:Hg19::chr3:55350938..55350945,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr3:55350938..55350945, +
1.55e-98FFCP PHASE1:Hg19::chr12:11461834..11461842,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461834..11461842, -
1.55e-98FFCP PHASE2:Hg19::chr6:89001385..89001386,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr6:89001385..89001386, +
1.55e-98FFCP PHASE2:Hg19::chr12:11461834..11461842,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461834..11461842, -
1.55e-98FFCP PHASE1:Hg19::chr12:11461169..11461178,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461169..11461178, +
1.55e-98FFCP PHASE1:Hg19::chr9:3971778..3971783,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr9:3971778..3971783, +
1.55e-98FFCP PHASE1:Hg19::chr10:55624430..55624435,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr10:55624430..55624435, -
1.55e-98FFCP PHASE1:Hg19::chrX:32229061..32229062,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chrX:32229061..32229062, -
1.55e-98FFCP PHASE1:Hg19::chr12:11506768..11506777,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506768..11506777, -
1.55e-98FFCP PHASE2:Hg19::chr12:11506768..11506777,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506768..11506777, -
1.55e-98FFCP PHASE2:Hg19::chr12:11461215..11461224,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11461215..11461224, -
1.55e-98FFCP PHASE1:Hg19::chr2:64121005..64121007,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr2:64121005..64121007, +
1.55e-98FFCP PHASE1:Hg19::chr12:11506471..11506494,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506471..11506494, -
1.55e-98FFCP PHASE2:Hg19::chr12:11506471..11506494,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11506471..11506494, -
1.55e-98FFCP PHASE1:Hg19::chr12:11546877..11546885,-#_df04e4fef314a9e91c86d5cd2b9475d3p4@PRB2
1.55e-98FFCP PHASE2:Hg19::chr12:11418889..11418902,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr12:11418889..11418902, +
1.55e-98FFCP PHASE2:Hg19::chr12:11546877..11546885,-#_df04e4fef314a9e91c86d5cd2b9475d3p4@PRB2
1.55e-98FFCP PHASE1:Hg19::chr20:38579074..38579083,-#_df04e4fef314a9e91c86d5cd2b9475d3p@chr20:38579074..38579083, -
1.55e-98FFCP PHASE2:Hg19::chr3:46982400..46982405,+#_df04e4fef314a9e91c86d5cd2b9475d3p@chr3:46982400..46982405, +

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