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{{UBERON
{{UBERON
|id=UBERON:0005090
|alt_id=
|name=muscle structure
|namespace=
|def="Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO]." [GO:0061061]
|xref=FBbt:00005073
|is_a=UBERON:0000061
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO]." [GO:0061061]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005090
|is_a=UBERON:0000061
|is_obsolete=
|located_in=
|located_in=
|name=muscle structure
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FBbt:00005073
}}
}}

Latest revision as of 17:50, 12 September 2014

Name:muscle structure
Namespace:FANTOM
Definition:"Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO]." [GO:0061061]
Xrefs:
links:
FBbt:00005073

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000061(anatomical structure)



Children

is a:UBERON:0001630 (muscle organ)
disjoint from:UBERON:0001474 (bone element)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005090 (muscle structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.61e-131FFCP PHASE1:Hg19::chr2:179542420..179542428,-#_cc7f01f13dcaa326bba937745d203570p@chr2:179542420..179542428, -
4.61e-131FFCP PHASE1:Hg19::chr19:50997736..50997745,-#_cc7f01f13dcaa326bba937745d203570p@chr19:50997736..50997745, -
4.61e-131FFCP PHASE2:Hg19::chr2:179542420..179542428,-#_cc7f01f13dcaa326bba937745d203570p@chr2:179542420..179542428, -
4.61e-131FFCP PHASE2:Hg19::chr19:50994855..50994864,-#_cc7f01f13dcaa326bba937745d203570p@chr19:50994855..50994864, -
4.61e-131FFCP PHASE1:Hg19::chr15:99548796..99548805,-#_cc7f01f13dcaa326bba937745d203570p3@PGPEP1L
4.61e-131FFCP PHASE1:Hg19::chr19:50994855..50994864,-#_cc7f01f13dcaa326bba937745d203570p@chr19:50994855..50994864, -
4.61e-131FFCP PHASE2:Hg19::chr10:99343436..99343448,+#_cc7f01f13dcaa326bba937745d203570p@chr10:99343436..99343448, +
4.61e-131FFCP PHASE1:Hg19::chr10:99343436..99343448,+#_cc7f01f13dcaa326bba937745d203570p@chr10:99343436..99343448, +
4.61e-131FFCP PHASE2:Hg19::chr2:179588230..179588237,-#_cc7f01f13dcaa326bba937745d203570p@chr2:179588230..179588237, -
4.61e-131FFCP PHASE2:Hg19::chr2:179548750..179548755,-#_cc7f01f13dcaa326bba937745d203570p@chr2:179548750..179548755, -
4.61e-131FFCP PHASE1:Hg19::chr2:179588230..179588237,-#_cc7f01f13dcaa326bba937745d203570p@chr2:179588230..179588237, -
4.61e-131FFCP PHASE1:Hg19::chr2:179548750..179548755,-#_cc7f01f13dcaa326bba937745d203570p@chr2:179548750..179548755, -
4.61e-131FFCP PHASE2:Hg19::chr15:99548796..99548805,-#_cc7f01f13dcaa326bba937745d203570p3@PGPEP1L
4.61e-131FFCP PHASE2:Hg19::chr19:50997736..50997745,-#_cc7f01f13dcaa326bba937745d203570p@chr19:50997736..50997745, -
8.99e-131FFCP PHASE2:Hg19::chr2:152419209..152419216,-#_8dda3006d76ea10ee5163a4aa346ce6bp@chr2:152419209..152419216, -
8.99e-131FFCP PHASE1:Hg19::chr2:168105377..168105386,+#_8dda3006d76ea10ee5163a4aa346ce6bp28@XIRP2
8.99e-131FFCP PHASE1:Hg19::chr2:152419209..152419216,-#_8dda3006d76ea10ee5163a4aa346ce6bp@chr2:152419209..152419216, -
8.99e-131FFCP PHASE1:Hg19::chr2:152342364..152342373,-#_8dda3006d76ea10ee5163a4aa346ce6bp@chr2:152342364..152342373, -
8.99e-131FFCP PHASE2:Hg19::chr2:152342364..152342373,-#_8dda3006d76ea10ee5163a4aa346ce6bp@chr2:152342364..152342373, -
8.99e-131FFCP PHASE1:Hg19::chr12:102075405..102075407,+#_8dda3006d76ea10ee5163a4aa346ce6bp@chr12:102075405..102075407, +
8.99e-131FFCP PHASE2:Hg19::chr2:152514527..152514536,-#_8dda3006d76ea10ee5163a4aa346ce6bp@chr2:152514527..152514536, -
8.99e-131FFCP PHASE2:Hg19::chr2:152476098..152476105,-#_8dda3006d76ea10ee5163a4aa346ce6bp@chr2:152476098..152476105, -
8.99e-131FFCP PHASE2:Hg19::chr12:102075405..102075407,+#_8dda3006d76ea10ee5163a4aa346ce6bp@chr12:102075405..102075407, +
8.99e-131FFCP PHASE1:Hg19::chr2:152514527..152514536,-#_8dda3006d76ea10ee5163a4aa346ce6bp@chr2:152514527..152514536, -
8.99e-131FFCP PHASE1:Hg19::chr2:152476098..152476105,-#_8dda3006d76ea10ee5163a4aa346ce6bp@chr2:152476098..152476105, -
8.99e-131FFCP PHASE2:Hg19::chr2:168106984..168106993,+#_8dda3006d76ea10ee5163a4aa346ce6bp34@XIRP2
8.99e-131FFCP PHASE1:Hg19::chr2:168106984..168106993,+#_8dda3006d76ea10ee5163a4aa346ce6bp34@XIRP2
8.99e-131FFCP PHASE2:Hg19::chr2:168105377..168105386,+#_8dda3006d76ea10ee5163a4aa346ce6bp28@XIRP2
1.75e-130FFCP PHASE2:Hg19::chr2:152393686..152393693,-#_3091f7b3505afc67a97ad25cd9716e1dp@chr2:152393686..152393693, -
1.75e-130FFCP PHASE1:Hg19::chr2:152393686..152393693,-#_3091f7b3505afc67a97ad25cd9716e1dp@chr2:152393686..152393693, -
5.68e-99FFCP PHASE2:Hg19::chr10:99342361..99342373,+#_bb9bf604a302fb613621b04f9bc3bdb6p@chr10:99342361..99342373, +
5.68e-99FFCP PHASE1:Hg19::chr2:179399744..179399749,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:179399744..179399749, -
5.68e-99FFCP PHASE2:Hg19::chr2:179399744..179399749,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:179399744..179399749, -
5.68e-99FFCP PHASE2:Hg19::chr15:99548808..99548813,-#_bb9bf604a302fb613621b04f9bc3bdb6p6@PGPEP1L
5.68e-99FFCP PHASE2:Hg19::chr19:45818804..45818807,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr19:45818804..45818807, -
5.68e-99FFCP PHASE1:Hg19::chr10:99342361..99342373,+#_bb9bf604a302fb613621b04f9bc3bdb6p@chr10:99342361..99342373, +
5.68e-99FFCP PHASE1:Hg19::chr19:45818804..45818807,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr19:45818804..45818807, -
5.68e-99FFCP PHASE2:Hg19::chr2:179517267..179517276,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:179517267..179517276, -
5.68e-99FFCP PHASE1:Hg19::chr15:99548808..99548813,-#_bb9bf604a302fb613621b04f9bc3bdb6p6@PGPEP1L
5.68e-99FFCP PHASE1:Hg19::chr2:179517267..179517276,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:179517267..179517276, -
5.68e-99FFCP PHASE2:Hg19::chr2:179509343..179509355,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:179509343..179509355, -
5.68e-99FFCP PHASE2:Hg19::chr2:152522901..152522910,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:152522901..152522910, -
5.68e-99FFCP PHASE1:Hg19::chr2:179509343..179509355,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:179509343..179509355, -
5.68e-99FFCP PHASE2:Hg19::chr19:50995069..50995079,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr19:50995069..50995079, -
5.68e-99FFCP PHASE1:Hg19::chr2:179399074..179399079,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:179399074..179399079, -
5.68e-99FFCP PHASE1:Hg19::chr2:152522901..152522910,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:152522901..152522910, -
5.68e-99FFCP PHASE2:Hg19::chr2:179397272..179397275,-#_bb9bf604a302fb613621b04f9bc3bdb6p143@TTN
5.68e-99FFCP PHASE1:Hg19::chr19:50995069..50995079,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr19:50995069..50995079, -
5.68e-99FFCP PHASE1:Hg19::chr2:179397272..179397275,-#_bb9bf604a302fb613621b04f9bc3bdb6p143@TTN
5.68e-99FFCP PHASE2:Hg19::chr2:179399074..179399079,-#_bb9bf604a302fb613621b04f9bc3bdb6p@chr2:179399074..179399079, -
5.68e-99FFCP PHASE2:Hg19::chr2:168114748..168114758,+#_bb9bf604a302fb613621b04f9bc3bdb6p32@XIRP2
5.68e-99FFCP PHASE1:Hg19::chr2:168114748..168114758,+#_bb9bf604a302fb613621b04f9bc3bdb6p32@XIRP2
9.38e-99FFCP PHASE2:Hg19::chr19:55644220..55644230,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr19:55644220..55644230, -
9.38e-99FFCP PHASE2:Hg19::chr2:152544188..152544205,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:152544188..152544205, -
9.38e-99FFCP PHASE1:Hg19::chr2:152581419..152581429,+#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:152581419..152581429, +
9.38e-99FFCP PHASE1:Hg19::chr19:55644220..55644230,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr19:55644220..55644230, -
9.38e-99FFCP PHASE1:Hg19::chr2:152544188..152544205,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:152544188..152544205, -
9.38e-99FFCP PHASE2:Hg19::chr2:152426665..152426675,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:152426665..152426675, -
9.38e-99FFCP PHASE1:Hg19::chr2:152426665..152426675,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:152426665..152426675, -
9.38e-99FFCP PHASE2:Hg19::chr2:152581419..152581429,+#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:152581419..152581429, +
9.38e-99FFCP PHASE2:Hg19::chrX:21676413..21676421,-#_f4067d3ba51b332a047f9f70ce41eae1p4@KLHL34
9.38e-99FFCP PHASE1:Hg19::chrX:21676413..21676421,-#_f4067d3ba51b332a047f9f70ce41eae1p4@KLHL34
9.38e-99FFCP PHASE1:Hg19::chr12:111351081..111351086,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr12:111351081..111351086, -
9.38e-99FFCP PHASE2:Hg19::chr2:179569985..179569993,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:179569985..179569993, -
9.38e-99FFCP PHASE2:Hg19::chr2:179594654..179594662,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:179594654..179594662, -
9.38e-99FFCP PHASE1:Hg19::chr2:179569985..179569993,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:179569985..179569993, -
9.38e-99FFCP PHASE1:Hg19::chr2:179594654..179594662,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:179594654..179594662, -
9.38e-99FFCP PHASE2:Hg19::chr2:168105520..168105527,+#_f4067d3ba51b332a047f9f70ce41eae1p45@XIRP2
9.38e-99FFCP PHASE2:Hg19::chr2:152520289..152520294,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:152520289..152520294, -
9.38e-99FFCP PHASE2:Hg19::chr2:179529262..179529271,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:179529262..179529271, -
9.38e-99FFCP PHASE2:Hg19::chr14:20904319..20904328,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr14:20904319..20904328, -
9.38e-99FFCP PHASE1:Hg19::chr2:168105520..168105527,+#_f4067d3ba51b332a047f9f70ce41eae1p45@XIRP2
9.38e-99FFCP PHASE2:Hg19::chr12:111351081..111351086,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr12:111351081..111351086, -
9.38e-99FFCP PHASE1:Hg19::chr14:20904319..20904328,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr14:20904319..20904328, -
9.38e-99FFCP PHASE1:Hg19::chr2:152520289..152520294,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:152520289..152520294, -
9.38e-99FFCP PHASE1:Hg19::chr2:179529262..179529271,-#_f4067d3ba51b332a047f9f70ce41eae1p@chr2:179529262..179529271, -
9.38e-99FFCP PHASE2:Hg19::chrX:21672387..21672391,-#_f4067d3ba51b332a047f9f70ce41eae1p@chrX:21672387..21672391, -
9.38e-99FFCP PHASE1:Hg19::chrX:21672387..21672391,-#_f4067d3ba51b332a047f9f70ce41eae1p@chrX:21672387..21672391, -
1.55e-98FFCP PHASE1:Hg19::chr2:152383493..152383501,-#_b5f29e56c96205ee1065b1736bfbbfe8p@chr2:152383493..152383501, -
1.55e-98FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr2:76859417..76859418, +
1.55e-98FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr7:128483294..128483304, +
1.55e-98FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr10:97176812..97176813, +
1.55e-98FFCP PHASE2:Hg19::chr12:10871020..10871032,-#_b5f29e56c96205ee1065b1736bfbbfe8p26@CSDA
1.55e-98FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_b5f29e56c96205ee1065b1736bfbbfe8p@chr4:186423235..186423240, -
1.55e-98FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr10:79759687..79759690, +
1.55e-98FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr11:3691037..3691040, +
1.55e-98FFCP PHASE2:Hg19::chr18:10458574..10458579,-#_b5f29e56c96205ee1065b1736bfbbfe8p@chr18:10458574..10458579, -
1.55e-98FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr22:25535147..25535150, +
1.55e-98FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr22:25535147..25535150, +
1.55e-98FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr4:85166508..85166512, +
1.55e-98FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr11:3691037..3691040, +
1.55e-98FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr2:76859417..76859418, +
1.55e-98FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_b5f29e56c96205ee1065b1736bfbbfe8p@chr7:128483294..128483304, +
1.55e-98FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_b5f29e56c96205ee1065b1736bfbbfe8p@chr4:186423235..186423240, -
1.55e-98FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_b5f29e56c96205ee1065b1736bfbbfe8p@chr2:179396370..179396375, -
1.55e-98FFCP PHASE1:Hg19::chr12:10871020..10871032,-#_b5f29e56c96205ee1065b1736bfbbfe8p26@CSDA
1.55e-98FFCP PHASE1:Hg19::chr18:10458574..10458579,-#_b5f29e56c96205ee1065b1736bfbbfe8p@chr18:10458574..10458579, -
1.55e-98FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_b5f29e56c96205ee1065b1736bfbbfe8p@chr2:179396370..179396375, -
1.55e-98FFCP PHASE2:Hg19::chr2:152409955..152409964,-#_b5f29e56c96205ee1065b1736bfbbfe8p@chr2:152409955..152409964, -
1.55e-98FFCP PHASE1:Hg19::chr2:152409955..152409964,-#_b5f29e56c96205ee1065b1736bfbbfe8p@chr2:152409955..152409964, -

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