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{{UBERON
{{UBERON
|id=UBERON:0005408
|alt_id=
|name=circumventricular organ
|namespace=
|def="Brain region located around or in relation to the ventricular system that is highly vascularized and distinguished by the lack of a blood brain barrier." [NIF_GrossAnatomy:nlx_anat_20090312, Wikipedia:Circumventricular_organs]
|xref=FMA:84081;;MA:0002942;;NIF_GrossAnatomy:nlx_anat_20090312
|is_a=UBERON:0002616
|synonym="circumventricular organ" EXACT [NIF_GrossAnatomy:nlx_anat_20090312];;"CVO" EXACT [NIF_GrossAnatomy:nlx_anat_20090312]
|comment=AO notes: MA subdivides into sensory and secretory
|comment=AO notes: MA subdivides into sensory and secretory
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Brain region located around or in relation to the ventricular system that is highly vascularized and distinguished by the lack of a blood brain barrier." [NIF_GrossAnatomy:nlx_anat_20090312, Wikipedia:Circumventricular_organs]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005408
|is_a=UBERON:0002616
|is_obsolete=
|located_in=
|located_in=
|name=circumventricular organ
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000955
|part_of=UBERON:0000955
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="circumventricular organ" EXACT [NIF_GrossAnatomy:nlx_anat_20090312];;"CVO" EXACT [NIF_GrossAnatomy:nlx_anat_20090312]
|union_of=
|xref=FMA:84081;;http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png;;MA:0002942;;NIF_GrossAnatomy:nlx_anat_20090312
}}
}}

Latest revision as of 17:53, 12 September 2014

Name:circumventricular organ
Namespace:FANTOM
Definition:"Brain region located around or in relation to the ventricular system that is highly vascularized and distinguished by the lack of a blood brain barrier." [NIF_GrossAnatomy:nlx_anat_20090312, Wikipedia:Circumventricular_organs]
Xrefs:
links:

FMA:84081
[ Gray734.png Gray734.png]
MA:0002942

NIF_GrossAnatomy:nlx_anat_20090312
Synonyms: "circumventricular organ" EXACT [NIF_GrossAnatomy:nlx_anat_20090312]
"CVO" EXACT [NIF_GrossAnatomy:nlx_anat_20090312]
Comments:AO notes: MA subdivides into sensory and secretory

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002616(regional part of brain)
part_of:UBERON:0000955(brain)



Children

is a:UBERON:0010134 (secretory circumventricular organ)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005408 (circumventricular organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.29e-195FFCP PHASE1:Hg19::chr12:81859007..81859036,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:81859007..81859036, +
3.29e-195FFCP PHASE1:Hg19::chr5:136699666..136699696,-#_b3259e9f673ae942fe92d28dd8110bccp@chr5:136699666..136699696, -
3.29e-195FFCP PHASE1:Hg19::chr2:44903714..44903719,+#_b3259e9f673ae942fe92d28dd8110bccp8@CAMKMT
3.29e-195FFCP PHASE1:Hg19::chr16:17930871..17930877,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:17930871..17930877, -
3.29e-195FFCP PHASE1:Hg19::chr3:192894664..192894677,-#_b3259e9f673ae942fe92d28dd8110bccp1@ENST00000414895
3.29e-195FFCP PHASE2:Hg19::chr6:158734173..158734183,+#_b3259e9f673ae942fe92d28dd8110bccp7@TULP4
3.29e-195FFCP PHASE2:Hg19::chr20:44991864..44991887,-#_b3259e9f673ae942fe92d28dd8110bccp10@SLC35C2
3.29e-195FFCP PHASE1:Hg19::chr5:119868809..119868839,+#_b3259e9f673ae942fe92d28dd8110bccp@chr5:119868809..119868839, +
3.29e-195FFCP PHASE2:Hg19::chr8:135473748..135473753,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135473748..135473753, -
3.29e-195FFCP PHASE2:Hg19::chr2:216447404..216447411,-#_b3259e9f673ae942fe92d28dd8110bccp1@ENST00000457625
3.29e-195FFCP PHASE1:Hg19::chr8:99033409..99033415,+#_b3259e9f673ae942fe92d28dd8110bccp16@MATN2
3.29e-195FFCP PHASE2:Hg19::chr7:9228468..9228494,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9228468..9228494, -
3.29e-195FFCP PHASE1:Hg19::chr13:21399081..21399087,+#_b3259e9f673ae942fe92d28dd8110bccp@chr13:21399081..21399087, +
3.29e-195FFCP PHASE2:Hg19::chr16:51174216..51174239,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:51174216..51174239, -
3.29e-195FFCP PHASE2:Hg19::chr2:108602341..108602352,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:108602341..108602352, +
3.29e-195FFCP PHASE1:Hg19::chr18:56963093..56963105,-#_b3259e9f673ae942fe92d28dd8110bccp@chr18:56963093..56963105, -
3.29e-195FFCP PHASE1:Hg19::chr16:1210506..1210513,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:1210506..1210513, -
3.29e-195FFCP PHASE2:Hg19::chr9:92310419..92310432,+#_b3259e9f673ae942fe92d28dd8110bccp@chr9:92310419..92310432, +
3.29e-195FFCP PHASE2:Hg19::chr15:47662877..47662880,-#_b3259e9f673ae942fe92d28dd8110bccp@chr15:47662877..47662880, -
3.29e-195FFCP PHASE2:Hg19::chr1:99860753..99860764,-#_b3259e9f673ae942fe92d28dd8110bccp@chr1:99860753..99860764, -
3.29e-195FFCP PHASE2:Hg19::chr11:18042584..18042593,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18042584..18042593, -
3.29e-195FFCP PHASE1:Hg19::chr1:204620238..204620253,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:204620238..204620253, +
3.29e-195FFCP PHASE1:Hg19::chr12:49621658..49621666,+#_b3259e9f673ae942fe92d28dd8110bccp21@TUBA1C
3.29e-195FFCP PHASE2:Hg19::chr7:9194488..9194491,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9194488..9194491, -
3.29e-195FFCP PHASE1:Hg19::chr11:18067951..18067954,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18067951..18067954, -
3.29e-195FFCP PHASE2:Hg19::chr15:55470984..55471009,-#_b3259e9f673ae942fe92d28dd8110bccp@chr15:55470984..55471009, -
3.29e-195FFCP PHASE2:Hg19::chr13:68306577..68306607,+#_b3259e9f673ae942fe92d28dd8110bccp@chr13:68306577..68306607, +
3.29e-195FFCP PHASE2:Hg19::chr5:136328601..136328607,-#_b3259e9f673ae942fe92d28dd8110bccp25@SPOCK1
3.29e-195FFCP PHASE2:Hg19::chr17:6328202..6328224,-#_b3259e9f673ae942fe92d28dd8110bccp1@BC014398
3.29e-195FFCP PHASE1:Hg19::chr8:135522475..135522486,-#_b3259e9f673ae942fe92d28dd8110bccp16@ZFAT
3.29e-195FFCP PHASE2:Hg19::chr8:99033417..99033423,+#_b3259e9f673ae942fe92d28dd8110bccp17@MATN2
3.29e-195FFCP PHASE1:Hg19::chr12:6954834..6954841,+#_b3259e9f673ae942fe92d28dd8110bccp9@GNB3
3.29e-195FFCP PHASE1:Hg19::chr3:54952432..54952459,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:54952432..54952459, -
3.29e-195FFCP PHASE2:Hg19::chr11:18041206..18041211,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18041206..18041211, -
3.29e-195FFCP PHASE2:Hg19::chr13:52650530..52650533,-#_b3259e9f673ae942fe92d28dd8110bccp@chr13:52650530..52650533, -
3.29e-195FFCP PHASE2:Hg19::chr7:32468385..32468392,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:32468385..32468392, -
3.29e-195FFCP PHASE2:Hg19::chr12:55422565..55422604,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:55422565..55422604, +
3.29e-195FFCP PHASE1:Hg19::chr12:56582028..56582062,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:56582028..56582062, +
3.29e-195FFCP PHASE2:Hg19::chr12:60826120..60826127,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:60826120..60826127, +
3.29e-195FFCP PHASE1:Hg19::chr8:135504353..135504365,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135504353..135504365, -
3.29e-195FFCP PHASE1:Hg19::chr2:48705144..48705150,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:48705144..48705150, +
3.29e-195FFCP PHASE2:Hg19::chr12:121088121..121088131,+#_b3259e9f673ae942fe92d28dd8110bccp11@CABP1
3.29e-195FFCP PHASE1:Hg19::chr9:137539895..137539904,+#_b3259e9f673ae942fe92d28dd8110bccp@chr9:137539895..137539904, +
3.29e-195FFCP PHASE2:Hg19::chr1:57975398..57975401,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:57975398..57975401, +
3.29e-195FFCP PHASE1:Hg19::chr16:18066319..18066337,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:18066319..18066337, -
3.29e-195FFCP PHASE1:Hg19::chr11:18041194..18041197,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18041194..18041197, -
3.29e-195FFCP PHASE1:Hg19::chr2:17065916..17065929,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:17065916..17065929, +
3.29e-195FFCP PHASE1:Hg19::chr8:135473063..135473075,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135473063..135473075, -
3.29e-195FFCP PHASE1:Hg19::chr7:9178561..9178568,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9178561..9178568, -
3.29e-195FFCP PHASE1:Hg19::chr5:135732675..135732680,-#_b3259e9f673ae942fe92d28dd8110bccp3@ENST00000514282
3.29e-195FFCP PHASE2:Hg19::chr1:154540028..154540037,+#_b3259e9f673ae942fe92d28dd8110bccp4@CHRNB2
3.29e-195FFCP PHASE1:Hg19::chr8:87755821..87755822,-#_b3259e9f673ae942fe92d28dd8110bccp10@CNGB3
3.29e-195FFCP PHASE1:Hg19::chr5:7338484..7338504,-#_b3259e9f673ae942fe92d28dd8110bccp@chr5:7338484..7338504, -
3.29e-195FFCP PHASE2:Hg19::chr2:17185712..17185735,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:17185712..17185735, +
3.29e-195FFCP PHASE1:Hg19::chr12:99734965..99734976,-#_b3259e9f673ae942fe92d28dd8110bccp@chr12:99734965..99734976, -
3.29e-195FFCP PHASE1:Hg19::chr5:119799539..119799543,+#_b3259e9f673ae942fe92d28dd8110bccp13@PRR16
3.29e-195FFCP PHASE2:Hg19::chr3:54952462..54952471,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:54952462..54952471, -
3.29e-195FFCP PHASE1:Hg19::chr7:9228468..9228494,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9228468..9228494, -
3.29e-195FFCP PHASE2:Hg19::chr1:204667243..204667248,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:204667243..204667248, +
3.29e-195FFCP PHASE2:Hg19::chr2:17075761..17075773,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:17075761..17075773, +
3.29e-195FFCP PHASE1:Hg19::chr2:108602341..108602352,+#_b3259e9f673ae942fe92d28dd8110bccp@chr2:108602341..108602352, +
3.29e-195FFCP PHASE1:Hg19::chr11:18063669..18063678,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18063669..18063678, -
3.29e-195FFCP PHASE2:Hg19::chr13:56628524..56628547,-#_b3259e9f673ae942fe92d28dd8110bccp@chr13:56628524..56628547, -
3.29e-195FFCP PHASE2:Hg19::chr5:135732714..135732721,-#_b3259e9f673ae942fe92d28dd8110bccp2@ENST00000514282
3.29e-195FFCP PHASE2:Hg19::chr3:100942376..100942381,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:100942376..100942381, -
3.29e-195FFCP PHASE1:Hg19::chr13:56628548..56628553,-#_b3259e9f673ae942fe92d28dd8110bccp@chr13:56628548..56628553, -
3.29e-195FFCP PHASE1:Hg19::chr6:158734173..158734183,+#_b3259e9f673ae942fe92d28dd8110bccp7@TULP4
3.29e-195FFCP PHASE2:Hg19::chr8:135504405..135504410,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135504405..135504410, -
3.29e-195FFCP PHASE1:Hg19::chr20:44991864..44991887,-#_b3259e9f673ae942fe92d28dd8110bccp10@SLC35C2
3.29e-195FFCP PHASE1:Hg19::chr17:74463608..74463612,+#_b3259e9f673ae942fe92d28dd8110bccp5@AANAT
3.29e-195FFCP PHASE1:Hg19::chr8:135473748..135473753,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135473748..135473753, -
3.29e-195FFCP PHASE1:Hg19::chr2:216447404..216447411,-#_b3259e9f673ae942fe92d28dd8110bccp1@ENST00000457625
3.29e-195FFCP PHASE2:Hg19::chr12:15134610..15134617,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:15134610..15134617, +
3.29e-195FFCP PHASE2:Hg19::chr5:119799576..119799585,+#_b3259e9f673ae942fe92d28dd8110bccp10@PRR16
3.29e-195FFCP PHASE2:Hg19::chr16:18066399..18066411,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:18066399..18066411, -
3.29e-195FFCP PHASE2:Hg19::chr11:18040537..18040547,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18040537..18040547, -
3.29e-195FFCP PHASE1:Hg19::chr9:92310419..92310432,+#_b3259e9f673ae942fe92d28dd8110bccp@chr9:92310419..92310432, +
3.29e-195FFCP PHASE1:Hg19::chr1:99860753..99860764,-#_b3259e9f673ae942fe92d28dd8110bccp@chr1:99860753..99860764, -
3.29e-195FFCP PHASE2:Hg19::chr8:87755845..87755852,-#_b3259e9f673ae942fe92d28dd8110bccp6@CNGB3
3.29e-195FFCP PHASE1:Hg19::chr12:55422565..55422604,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:55422565..55422604, +
3.29e-195FFCP PHASE2:Hg19::chr4:20985690..20985695,-#_b3259e9f673ae942fe92d28dd8110bccp38@KCNIP4
3.29e-195FFCP PHASE1:Hg19::chr7:9194488..9194491,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:9194488..9194491, -
3.29e-195FFCP PHASE1:Hg19::chr7:32468385..32468392,-#_b3259e9f673ae942fe92d28dd8110bccp@chr7:32468385..32468392, -
3.29e-195FFCP PHASE2:Hg19::chr16:17930871..17930877,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:17930871..17930877, -
3.29e-195FFCP PHASE2:Hg19::chr1:57907030..57907050,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:57907030..57907050, +
3.29e-195FFCP PHASE1:Hg19::chr12:121088121..121088131,+#_b3259e9f673ae942fe92d28dd8110bccp11@CABP1
3.29e-195FFCP PHASE2:Hg19::chr9:25264978..25265001,+#_b3259e9f673ae942fe92d28dd8110bccp@chr9:25264978..25265001, +
3.29e-195FFCP PHASE2:Hg19::chr2:216447425..216447432,-#_b3259e9f673ae942fe92d28dd8110bccp2@ENST00000457625
3.29e-195FFCP PHASE1:Hg19::chr8:99033417..99033423,+#_b3259e9f673ae942fe92d28dd8110bccp17@MATN2
3.29e-195FFCP PHASE2:Hg19::chr13:21399081..21399087,+#_b3259e9f673ae942fe92d28dd8110bccp@chr13:21399081..21399087, +
3.29e-195FFCP PHASE2:Hg19::chr12:81859007..81859036,+#_b3259e9f673ae942fe92d28dd8110bccp@chr12:81859007..81859036, +
3.29e-195FFCP PHASE1:Hg19::chr18:56963107..56963117,-#_b3259e9f673ae942fe92d28dd8110bccp@chr18:56963107..56963117, -
3.29e-195FFCP PHASE2:Hg19::chr11:84530787..84530803,+#_b3259e9f673ae942fe92d28dd8110bccp@chr11:84530787..84530803, +
3.29e-195FFCP PHASE2:Hg19::chr1:99860786..99860791,-#_b3259e9f673ae942fe92d28dd8110bccp@chr1:99860786..99860791, -
3.29e-195FFCP PHASE1:Hg19::chr11:18067959..18067962,-#_b3259e9f673ae942fe92d28dd8110bccp@chr11:18067959..18067962, -
3.29e-195FFCP PHASE1:Hg19::chr1:57975398..57975401,+#_b3259e9f673ae942fe92d28dd8110bccp@chr1:57975398..57975401, +
3.29e-195FFCP PHASE2:Hg19::chr3:101038595..101038604,-#_b3259e9f673ae942fe92d28dd8110bccp@chr3:101038595..101038604, -
3.29e-195FFCP PHASE2:Hg19::chr8:135520309..135520324,-#_b3259e9f673ae942fe92d28dd8110bccp@chr8:135520309..135520324, -
3.29e-195FFCP PHASE2:Hg19::chr11:74951707..74951719,+#_b3259e9f673ae942fe92d28dd8110bccp9@LOC100507050
3.29e-195FFCP PHASE1:Hg19::chr16:50898038..50898042,-#_b3259e9f673ae942fe92d28dd8110bccp@chr16:50898038..50898042, -

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