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{{UBERON
{{UBERON
|id=UBERON:0006601
|alt_id=
|name=presumptive ectoderm
|namespace=
|def="Presumptive structure at the animal poll of the blastula that will develop into ectoderm via the epiblast. Determined by fate mapping." [ZFA:0001376]
|xref=AAO:0000470;;EFO:0003466;;XAO:0004132;;ZFA:0001376
|is_a=UBERON:0006598
|synonym="presumptive epidermis" RELATED [ZFA:0001376]
|comment=note: AAO:0000473
|comment=note: AAO:0000473
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Presumptive structure at the animal poll of the blastula that will develop into ectoderm via the epiblast. Determined by fate mapping." [ZFA:0001376]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0006601
|is_a=UBERON:0006598
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=presumptive ectoderm
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000307
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="presumptive epidermis" RELATED [ZFA:0001376]
|union_of=
|xref=AAO:0000470;;EFO:0003466;;TAO:0001376;;XAO:0004132;;ZFA:0001376
}}
}}

Latest revision as of 17:58, 12 September 2014

Name:presumptive ectoderm
Namespace:FANTOM
Definition:"Presumptive structure at the animal poll of the blastula that will develop into ectoderm via the epiblast. Determined by fate mapping." [ZFA:0001376]
Xrefs:
links:

AAO:0000470
EFO:0003466
TAO:0001376
XAO:0004132

ZFA:0001376
Synonyms: "presumptive epidermis" RELATED [ZFA:0001376]
Comments:note: AAO:0000473

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006598(presumptive structure)
part_of:UBERON:0000307(blastula)



Children

develops from:UBERON:0000924 (ectoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006601 (presumptive ectoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.23e-62FFCP PHASE2:Hg19::chr11:31839488..31839515,-#_65f293ef27e9730e1a22103d55888135p3@PAX6
3.23e-62FFCP PHASE1:Hg19::chr11:31839488..31839515,-#_65f293ef27e9730e1a22103d55888135p3@PAX6
6.65e-62FFCP PHASE1:Hg19::chr1:197237352..197237414,+#_22efe1eb377fb1f06a75d10be9d19275p2@CRB1
6.65e-62FFCP PHASE2:Hg19::chr1:197237352..197237414,+#_22efe1eb377fb1f06a75d10be9d19275p2@CRB1
1.04e-61FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_3a747fbfaa6ca9c647081be5476ae7f7p3@CTNND2
1.04e-61FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_3a747fbfaa6ca9c647081be5476ae7f7p3@CTNND2
1.02e-60FFCP PHASE1:Hg19::chr5:87980761..87980821,-#_f76966854bbe9fb8ada3e8c30cf79feep4@LINC00461
1.02e-60FFCP PHASE2:Hg19::chr5:87980761..87980821,-#_f76966854bbe9fb8ada3e8c30cf79feep4@LINC00461
6.2e-60FFCP PHASE2:Hg19::chr6:123100738..123100763,+#_863c95a3ba56dc1a57b34078c32f1cbfp2@FABP7
6.2e-60FFCP PHASE1:Hg19::chr6:123100738..123100763,+#_863c95a3ba56dc1a57b34078c32f1cbfp2@FABP7
1.12e-59FFCP PHASE2:Hg19::chr11:62475005..62475041,-#_4790e65a6cee48de23c27a3aa86d38eep6@BSCL2
1.12e-59FFCP PHASE1:Hg19::chr11:62475005..62475041,-#_4790e65a6cee48de23c27a3aa86d38eep6@BSCL2
1.34e-59FFCP PHASE1:Hg19::chr4:165305086..165305179,-#_465efbe6066539bf0b86a45a32b4550cp2@MARCH1
1.34e-59FFCP PHASE2:Hg19::chr4:165305086..165305179,-#_465efbe6066539bf0b86a45a32b4550cp2@MARCH1
1.88e-59FFCP PHASE2:Hg19::chr18:59000657..59000672,+#_609f8335b3ab8345b924fe140a1c964dp1@CDH20
1.88e-59FFCP PHASE1:Hg19::chr18:59000657..59000672,+#_609f8335b3ab8345b924fe140a1c964dp1@CDH20
8.39e-59FFCP PHASE2:Hg19::chrX:13835398..13835429,-#_edfd14a0c3e73c69f8aeb4c2d7ffe3d2p6@GPM6B
8.39e-59FFCP PHASE1:Hg19::chrX:13835398..13835429,-#_edfd14a0c3e73c69f8aeb4c2d7ffe3d2p6@GPM6B
9.87e-59FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_7bdae2263e40163deff23b70f36c4de2p1@ANKFN1
9.87e-59FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_7bdae2263e40163deff23b70f36c4de2p1@ANKFN1
2.74e-58FFCP PHASE1:Hg19::chr8:132053136..132053177,-#_30df3e532d454c54ba4985d2466c82d4p2@ADCY8
2.74e-58FFCP PHASE2:Hg19::chr8:132053136..132053177,-#_30df3e532d454c54ba4985d2466c82d4p2@ADCY8
3.3e-58FFCP PHASE1:Hg19::chr11:62474885..62474903,-#_268f4352c3a13e51350cdf95b7dd9cafp5@BSCL2
3.3e-58FFCP PHASE2:Hg19::chr11:62474885..62474903,-#_268f4352c3a13e51350cdf95b7dd9cafp5@BSCL2
3.49e-58FFCP PHASE1:Hg19::chr9:19789028..19789050,-#_36e4199feb188caccc784204708cac74p1@SLC24A2
3.49e-58FFCP PHASE2:Hg19::chr9:19789028..19789050,-#_36e4199feb188caccc784204708cac74p1@SLC24A2
1.03e-57FFCP PHASE2:Hg19::chr2:210526233..210526258,+#_6b86b206f1e1d55487c0b0ac8c3d6b0fp9@MAP2
1.03e-57FFCP PHASE1:Hg19::chr2:210526233..210526258,+#_6b86b206f1e1d55487c0b0ac8c3d6b0fp9@MAP2
2.3e-57FFCP PHASE1:Hg19::chr8:30496078..30496130,+#_c7c84f920938c9c06c4ec995221fcef7p1@LOC100507341
2.3e-57FFCP PHASE2:Hg19::chr8:30496078..30496130,+#_c7c84f920938c9c06c4ec995221fcef7p1@LOC100507341
2.58e-57FFCP PHASE1:Hg19::chr10:62149542..62149590,-#_0e8c5ebc633c715c511866ed3594707ap1@ANK3
2.58e-57FFCP PHASE2:Hg19::chr10:62149542..62149590,-#_0e8c5ebc633c715c511866ed3594707ap1@ANK3
2.86e-57FFCP PHASE2:Hg19::chr11:105481612..105481624,+#_fb9d23a56077e7aaf06ff326b593f1f4p2@GRIA4
2.86e-57FFCP PHASE1:Hg19::chr11:105481612..105481624,+#_fb9d23a56077e7aaf06ff326b593f1f4p2@GRIA4
3.09e-57FFCP PHASE1:Hg19::chr8:9953136..9953190,+#_7b4c30fd68c73a6ac3483766a1f6268cp3@MSRA
3.09e-57FFCP PHASE2:Hg19::chr8:9953136..9953190,+#_7b4c30fd68c73a6ac3483766a1f6268cp3@MSRA
7.06e-57FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_568fe3fcf890e8007f84f0dd42787a76p2@RFX4
7.06e-57FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_568fe3fcf890e8007f84f0dd42787a76p2@RFX4
9.33e-57FFCP PHASE2:Hg19::chr2:210526166..210526232,+#_d138256dd4507edbb6ac7892fc722dafp5@MAP2
9.33e-57FFCP PHASE1:Hg19::chr2:210526166..210526232,+#_d138256dd4507edbb6ac7892fc722dafp5@MAP2
9.72e-57FFCP PHASE2:Hg19::chr5:11904580..11904619,-#_69ee5b93fe3a4427658d569b23bff30fp6@CTNND2
9.72e-57FFCP PHASE1:Hg19::chr5:11904580..11904619,-#_69ee5b93fe3a4427658d569b23bff30fp6@CTNND2
1.1e-56FFCP PHASE2:Hg19::chr17:43972989..43973035,-#_b5e53b88b775d9b47406fed6a38f327bp1@LOC100128977
1.1e-56FFCP PHASE1:Hg19::chr17:43972989..43973035,-#_b5e53b88b775d9b47406fed6a38f327bp1@LOC100128977
1.39e-56FFCP PHASE2:Hg19::chr5:87437585..87437647,+#_19c1bc5bfbf74204eb6297dcdc523a80p@chr5:87437585..87437647, +
1.39e-56FFCP PHASE1:Hg19::chr5:87437585..87437647,+#_19c1bc5bfbf74204eb6297dcdc523a80p@chr5:87437585..87437647, +
1.39e-56FFCP PHASE2:Hg19::chr19:46932128..46932207,-#_19c1bc5bfbf74204eb6297dcdc523a80p@chr19:46932128..46932207, -
1.39e-56FFCP PHASE1:Hg19::chr19:46932128..46932207,-#_19c1bc5bfbf74204eb6297dcdc523a80p@chr19:46932128..46932207, -
1.4e-56FFCP PHASE2:Hg19::chr11:105481405..105481472,+#_27c38059a7e941cd3ba4a27f86a20ab4p1@GRIA4
1.4e-56FFCP PHASE1:Hg19::chr11:105481405..105481472,+#_27c38059a7e941cd3ba4a27f86a20ab4p1@GRIA4
1.65e-56FFCP PHASE2:Hg19::chr4:176733558..176733609,-#_017e0b0fb6cee2634df9b57e8c3ed443p7@GPM6A
1.65e-56FFCP PHASE1:Hg19::chr4:176733558..176733609,-#_017e0b0fb6cee2634df9b57e8c3ed443p7@GPM6A
2.03e-56FFCP PHASE2:Hg19::chr1:205012293..205012326,+#_f386cf98ac1f2323f5a447f22edddbd3p2@CNTN2
2.03e-56FFCP PHASE1:Hg19::chr1:205012293..205012326,+#_f386cf98ac1f2323f5a447f22edddbd3p2@CNTN2
5.74e-56FFCP PHASE2:Hg19::chr4:176733377..176733424,-#_8ec948de3598f7808d6afeecb30caee0p1@GPM6A
5.74e-56FFCP PHASE1:Hg19::chr4:176733377..176733424,-#_8ec948de3598f7808d6afeecb30caee0p1@GPM6A
7.08e-56FFCP PHASE2:Hg19::chr12:20848486..20848542,+#_ef57727f64215f42b414766b3e76f3efp1@SLCO1C1
7.08e-56FFCP PHASE1:Hg19::chr12:20848486..20848542,+#_ef57727f64215f42b414766b3e76f3efp1@SLCO1C1
7.16e-56FFCP PHASE2:Hg19::chr9:19789059..19789070,-#_73b319975f29a4e3065d4ffc0e444739p2@SLC24A2
7.16e-56FFCP PHASE1:Hg19::chr9:19789059..19789070,-#_73b319975f29a4e3065d4ffc0e444739p2@SLC24A2
7.49e-56FFCP PHASE1:Hg19::chr11:105480793..105480845,+#_ae0572ad2f9841c2f36227d0ef8a812bp3@GRIA4
7.49e-56FFCP PHASE2:Hg19::chr11:105480793..105480845,+#_ae0572ad2f9841c2f36227d0ef8a812bp3@GRIA4
1.31e-55FFCP PHASE1:Hg19::chr3:181417353..181417371,+#_226d72a1d21577078c18b70c26eab3c6p1@SOX2-OT
1.31e-55FFCP PHASE2:Hg19::chr3:181417353..181417371,+#_226d72a1d21577078c18b70c26eab3c6p1@SOX2-OT
1.32e-55FFCP PHASE2:Hg19::chr4:176733425..176733439,-#_400529a09f4ff53d6470f8e3663e8fa5p8@GPM6A
1.32e-55FFCP PHASE1:Hg19::chr4:176733425..176733439,-#_400529a09f4ff53d6470f8e3663e8fa5p8@GPM6A
1.35e-55FFCP PHASE1:Hg19::chr8:9953735..9953778,+#_558512f828b2e905caaf4dbe53544dc7p@chr8:9953735..9953778, +
1.35e-55FFCP PHASE2:Hg19::chr8:9953735..9953778,+#_558512f828b2e905caaf4dbe53544dc7p@chr8:9953735..9953778, +
1.39e-55FFCP PHASE1:Hg19::chr3:47933982..47934047,-#_c595b77329d143f3d9234edac1e6a24cp3@MAP4
1.39e-55FFCP PHASE2:Hg19::chr3:47933982..47934047,-#_c595b77329d143f3d9234edac1e6a24cp3@MAP4
1.59e-55FFCP PHASE2:Hg19::chr3:181417374..181417407,+#_8985f4c4b5204034237588498c9d6666p2@SOX2-OT
1.59e-55FFCP PHASE1:Hg19::chr3:181417374..181417407,+#_8985f4c4b5204034237588498c9d6666p2@SOX2-OT
1.87e-55FFCP PHASE2:Hg19::chr21:42219168..42219187,-#_3af36d9f16a236919b06b8d117d5bf32p2@DSCAM
1.87e-55FFCP PHASE1:Hg19::chr21:42219168..42219187,-#_3af36d9f16a236919b06b8d117d5bf32p2@DSCAM
2.95e-55FFCP PHASE2:Hg19::chr12:99288536..99288653,-#_6879c918a9870edfdbf157df44fb601fp1@ANKS1B
2.95e-55FFCP PHASE1:Hg19::chr12:99288536..99288653,-#_6879c918a9870edfdbf157df44fb601fp1@ANKS1B
4.14e-55FFCP PHASE1:Hg19::chr17:49124154..49124169,-#_210458c5027280c7206b10b91a5b3c9bp6@SPAG9
4.14e-55FFCP PHASE2:Hg19::chr17:49124154..49124169,-#_210458c5027280c7206b10b91a5b3c9bp6@SPAG9
7.57e-55FFCP PHASE2:Hg19::chr12:106976774..106976788,+#_1daee6a15215c0b20a6b18251975a564p1@RFX4
7.57e-55FFCP PHASE1:Hg19::chr12:106976774..106976788,+#_1daee6a15215c0b20a6b18251975a564p1@RFX4
7.83e-55FFCP PHASE1:Hg19::chr17:42984601..42984636,-#_50bb2a73a11d139ed01d1b92a0e4da54p2@GFAP
7.83e-55FFCP PHASE2:Hg19::chr17:42984601..42984636,-#_50bb2a73a11d139ed01d1b92a0e4da54p2@GFAP
8.99e-55FFCP PHASE1:Hg19::chr2:210444402..210444423,+#_caf8e7cccac505e4e7b23bbf5418e465p11@MAP2
8.99e-55FFCP PHASE2:Hg19::chr2:210444402..210444423,+#_caf8e7cccac505e4e7b23bbf5418e465p11@MAP2
9.16e-55FFCP PHASE1:Hg19::chrX:151619746..151619815,-#_f6dfa35508d6ee2944e51afe0fd25ba5p1@GABRA3
9.16e-55FFCP PHASE2:Hg19::chrX:151619746..151619815,-#_f6dfa35508d6ee2944e51afe0fd25ba5p1@GABRA3
1.03e-54FFCP PHASE1:Hg19::chr14:60097524..60097538,-#_df80776a445fc601d058dc2e964f7d5cp3@RTN1
1.03e-54FFCP PHASE2:Hg19::chr14:60097524..60097538,-#_df80776a445fc601d058dc2e964f7d5cp3@RTN1
1.14e-54FFCP PHASE1:Hg19::chr2:210444267..210444287,+#_c351bde55dd465b5e38d445577b10a05p7@MAP2
1.14e-54FFCP PHASE2:Hg19::chr2:210444267..210444287,+#_c351bde55dd465b5e38d445577b10a05p7@MAP2
1.16e-54FFCP PHASE2:Hg19::chr17:43972010..43972027,+#_b784c25cbda7e4e216abeb1907a53ccep4@MAPT
1.16e-54FFCP PHASE1:Hg19::chr17:43972010..43972027,+#_b784c25cbda7e4e216abeb1907a53ccep4@MAPT
1.28e-54FFCP PHASE2:Hg19::chr2:210444345..210444394,+#_59f153610087d30d97e07ce6c06c06ddp3@MAP2
1.28e-54FFCP PHASE1:Hg19::chr19:10563567..10563617,+#_59f153610087d30d97e07ce6c06c06ddp1@PDE4A
1.28e-54FFCP PHASE2:Hg19::chr19:10563567..10563617,+#_59f153610087d30d97e07ce6c06c06ddp1@PDE4A
1.28e-54FFCP PHASE1:Hg19::chr2:210444345..210444394,+#_59f153610087d30d97e07ce6c06c06ddp3@MAP2
2.04e-54FFCP PHASE2:Hg19::chrX:13835124..13835142,-#_15da54e190626b67bed8a70bb3945cd7p5@GPM6B
2.04e-54FFCP PHASE1:Hg19::chrX:13835124..13835142,-#_15da54e190626b67bed8a70bb3945cd7p5@GPM6B
2.23e-54FFCP PHASE2:Hg19::chr1:177134024..177134052,-#_b7b8e7aa14199778edcb351242e93c93p2@ASTN1
2.23e-54FFCP PHASE1:Hg19::chr1:177134024..177134052,-#_b7b8e7aa14199778edcb351242e93c93p2@ASTN1

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