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{{UBERON
{{UBERON
|id=UBERON:0007303
|alt_id=
|name=pharyngeal vasculature
|namespace=
|def=
|xref=TAO:0005003;;ZFA:0005003
|is_a=UBERON:0002049;;UBERON:0004119
|synonym="branchial vasculature" EXACT [ZFA:0005003]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007303
|is_a=UBERON:0004119 ;;UBERON:0006876
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=pharyngeal vasculature
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001042
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="branchial vasculature" EXACT [ZFA:0005003]
|union_of=
|xref=TAO:0005003;;ZFA:0005003
}}
}}

Latest revision as of 18:01, 12 September 2014

Name:pharyngeal vasculature
Namespace:FANTOM
Xrefs:
links:

TAO:0005003

ZFA:0005003
Synonyms: "branchial vasculature" EXACT [ZFA:0005003]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004119(endoderm-derived structure),UBERON:0006876(vasculature of organ)
part_of:UBERON:0001042(chordate pharynx)



Children

part of:UBERON:0004363 (pharyngeal arch artery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007303 (pharyngeal vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_b09769bd649da2a1dfa55a536c9a0fcap@chr4:70707713..70707716, -
1.55e-98FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_b09769bd649da2a1dfa55a536c9a0fcap@chr8:90366581..90366594, -
1.55e-98FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_b09769bd649da2a1dfa55a536c9a0fcap@chr6:21648948..21648949, +
1.55e-98FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_b09769bd649da2a1dfa55a536c9a0fcap@chr4:70707713..70707716, -
1.55e-98FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_b09769bd649da2a1dfa55a536c9a0fcap@chr8:90366581..90366594, -
1.55e-98FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_b09769bd649da2a1dfa55a536c9a0fcap@chr6:21648948..21648949, +
2.74e-50FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_84f1d242a914cbb5c198eea6f85d4b99p@chr4:70707556..70707558, -
2.74e-50FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_84f1d242a914cbb5c198eea6f85d4b99p@chr4:70707556..70707558, -
4.52e-50FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_ce1cfe42840fe4a8527b83694aaff0d7p26@LINC00340
4.52e-50FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_ce1cfe42840fe4a8527b83694aaff0d7p14@FAS
4.52e-50FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_ce1cfe42840fe4a8527b83694aaff0d7p14@FAS
4.52e-50FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_ce1cfe42840fe4a8527b83694aaff0d7p@chr3:158928407..158928414, +
4.52e-50FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_ce1cfe42840fe4a8527b83694aaff0d7p@chrX:23072856..23072859, -
4.52e-50FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_ce1cfe42840fe4a8527b83694aaff0d7p@chr8:120651826..120651840, -
4.52e-50FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_ce1cfe42840fe4a8527b83694aaff0d7p26@LINC00340
4.52e-50FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_ce1cfe42840fe4a8527b83694aaff0d7p@chr8:120651826..120651840, -
4.52e-50FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_ce1cfe42840fe4a8527b83694aaff0d7p@chr3:158928407..158928414, +
4.52e-50FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_ce1cfe42840fe4a8527b83694aaff0d7p@chrX:23072856..23072859, -
3.61e-34FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_ffb602f6f16efc7f9f35b2879232dc40p@chr4:70707608..70707615, -
3.61e-34FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_ffb602f6f16efc7f9f35b2879232dc40p@chr4:70707608..70707615, -
5.04e-34FFCP PHASE1:Hg19::chr4:70690584..70690589,+#_be4f08314b7a4eda4f5955a8b251d8edp@chr4:70690584..70690589, +
5.04e-34FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_be4f08314b7a4eda4f5955a8b251d8edp@chr3:156258392..156258395, -
5.04e-34FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_be4f08314b7a4eda4f5955a8b251d8edp@chr17:76824975..76824978, -
5.04e-34FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_be4f08314b7a4eda4f5955a8b251d8edp@chr3:156258392..156258395, -
5.04e-34FFCP PHASE2:Hg19::chr4:70690584..70690589,+#_be4f08314b7a4eda4f5955a8b251d8edp@chr4:70690584..70690589, +
5.04e-34FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_be4f08314b7a4eda4f5955a8b251d8edp@chr17:76824975..76824978, -
5.04e-34FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_be4f08314b7a4eda4f5955a8b251d8edp@chr11:131614903..131614910, -
5.04e-34FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_be4f08314b7a4eda4f5955a8b251d8edp@chr11:131614903..131614910, -
7.05e-34FFCP PHASE2:Hg19::chr19:54466179..54466202,+#_ff2640a3790e98fbd77555d694f69ca5p1@CACNG8
7.05e-34FFCP PHASE1:Hg19::chr1:176668544..176668553,+#_ff2640a3790e98fbd77555d694f69ca5p@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chr4:38147484..38147500,-#_ff2640a3790e98fbd77555d694f69ca5p@chr4:38147484..38147500, -
7.05e-34FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_ff2640a3790e98fbd77555d694f69ca5p19@AMOTL1
7.05e-34FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_ff2640a3790e98fbd77555d694f69ca5p@chr1:93043102..93043113, -
7.05e-34FFCP PHASE1:Hg19::chr7:18834859..18834879,-#_ff2640a3790e98fbd77555d694f69ca5p@chr7:18834859..18834879, -
7.05e-34FFCP PHASE1:Hg19::chr6:119590894..119590904,-#_ff2640a3790e98fbd77555d694f69ca5p1@ENST00000406333
7.05e-34FFCP PHASE1:Hg19::chr20:48184812..48184818,-#_ff2640a3790e98fbd77555d694f69ca5p13@PTGIS
7.05e-34FFCP PHASE1:Hg19::chr4:24645959..24645967,+#_ff2640a3790e98fbd77555d694f69ca5p@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chrX:140904171..140904173,+#_ff2640a3790e98fbd77555d694f69ca5p@chrX:140904171..140904173, +
7.05e-34FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_ff2640a3790e98fbd77555d694f69ca5p@chr13:38136724..38136726, +
7.05e-34FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_ff2640a3790e98fbd77555d694f69ca5p19@AMOTL1
7.05e-34FFCP PHASE2:Hg19::chr9:16059821..16059828,+#_ff2640a3790e98fbd77555d694f69ca5p@chr9:16059821..16059828, +
7.05e-34FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_ff2640a3790e98fbd77555d694f69ca5p@chr13:38136724..38136726, +
7.05e-34FFCP PHASE1:Hg19::chr8:134047162..134047169,+#_ff2640a3790e98fbd77555d694f69ca5p@chr8:134047162..134047169, +
7.05e-34FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_ff2640a3790e98fbd77555d694f69ca5p@chr7:22687639..22687644, +
7.05e-34FFCP PHASE2:Hg19::chr1:176668544..176668553,+#_ff2640a3790e98fbd77555d694f69ca5p@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chr19:54466179..54466202,+#_ff2640a3790e98fbd77555d694f69ca5p1@CACNG8
7.05e-34FFCP PHASE2:Hg19::chr7:18834859..18834879,-#_ff2640a3790e98fbd77555d694f69ca5p@chr7:18834859..18834879, -
7.05e-34FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_ff2640a3790e98fbd77555d694f69ca5p@chr1:93043102..93043113, -
7.05e-34FFCP PHASE2:Hg19::chr4:38147484..38147500,-#_ff2640a3790e98fbd77555d694f69ca5p@chr4:38147484..38147500, -
7.05e-34FFCP PHASE1:Hg19::chrX:140904171..140904173,+#_ff2640a3790e98fbd77555d694f69ca5p@chrX:140904171..140904173, +
7.05e-34FFCP PHASE2:Hg19::chr8:134047162..134047169,+#_ff2640a3790e98fbd77555d694f69ca5p@chr8:134047162..134047169, +
7.05e-34FFCP PHASE1:Hg19::chr9:16059821..16059828,+#_ff2640a3790e98fbd77555d694f69ca5p@chr9:16059821..16059828, +
7.05e-34FFCP PHASE2:Hg19::chr6:119590894..119590904,-#_ff2640a3790e98fbd77555d694f69ca5p1@ENST00000406333
7.05e-34FFCP PHASE2:Hg19::chr20:48184812..48184818,-#_ff2640a3790e98fbd77555d694f69ca5p13@PTGIS
7.05e-34FFCP PHASE2:Hg19::chr4:24645959..24645967,+#_ff2640a3790e98fbd77555d694f69ca5p@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_ff2640a3790e98fbd77555d694f69ca5p@chr7:22687639..22687644, +
5.56e-26FFCP PHASE1:Hg19::chr9:33797893..33797903,+#_c60e20f0d44862b46277017b4078184bp@chr9:33797893..33797903, +
5.56e-26FFCP PHASE2:Hg19::chr9:33797893..33797903,+#_c60e20f0d44862b46277017b4078184bp@chr9:33797893..33797903, +
7.14e-26FFCP PHASE2:Hg19::chr4:891819..891820,-#_6f0a550437523148b87a15774973dfc0p@chr4:891819..891820, -
7.14e-26FFCP PHASE2:Hg19::chr8:123580995..123581003,-#_6f0a550437523148b87a15774973dfc0p@chr8:123580995..123581003, -
7.14e-26FFCP PHASE1:Hg19::chr19:10218330..10218339,+#_6f0a550437523148b87a15774973dfc0p1@SNORD105
7.14e-26FFCP PHASE2:Hg19::chr17:61995172..61995199,-#_6f0a550437523148b87a15774973dfc0p@chr17:61995172..61995199, -
7.14e-26FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_6f0a550437523148b87a15774973dfc0p@chr18:65175930..65175941, +
7.14e-26FFCP PHASE2:Hg19::chr2:73302288..73302299,-#_6f0a550437523148b87a15774973dfc0p13@RAB11FIP5
7.14e-26FFCP PHASE2:Hg19::chr19:15509437..15509442,-#_6f0a550437523148b87a15774973dfc0p@chr19:15509437..15509442, -
7.14e-26FFCP PHASE2:Hg19::chr6:34208414..34208429,+#_6f0a550437523148b87a15774973dfc0p16@HMGA1
7.14e-26FFCP PHASE2:Hg19::chr10:103040652..103040655,+#_6f0a550437523148b87a15774973dfc0p1@ENST00000492301
7.14e-26FFCP PHASE1:Hg19::chr4:891819..891820,-#_6f0a550437523148b87a15774973dfc0p@chr4:891819..891820, -
7.14e-26FFCP PHASE2:Hg19::chr19:10218330..10218339,+#_6f0a550437523148b87a15774973dfc0p1@SNORD105
7.14e-26FFCP PHASE1:Hg19::chr10:103040652..103040655,+#_6f0a550437523148b87a15774973dfc0p1@ENST00000492301
7.14e-26FFCP PHASE1:Hg19::chr8:123580995..123581003,-#_6f0a550437523148b87a15774973dfc0p@chr8:123580995..123581003, -
7.14e-26FFCP PHASE1:Hg19::chr6:34208414..34208429,+#_6f0a550437523148b87a15774973dfc0p16@HMGA1
7.14e-26FFCP PHASE1:Hg19::chr17:61995172..61995199,-#_6f0a550437523148b87a15774973dfc0p@chr17:61995172..61995199, -
7.14e-26FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_6f0a550437523148b87a15774973dfc0p@chr18:65175930..65175941, +
7.14e-26FFCP PHASE1:Hg19::chr2:73302288..73302299,-#_6f0a550437523148b87a15774973dfc0p13@RAB11FIP5
7.14e-26FFCP PHASE1:Hg19::chr19:15509437..15509442,-#_6f0a550437523148b87a15774973dfc0p@chr19:15509437..15509442, -
9.18e-26FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_5214680134f586bfbcf2721333e4ccb0p@chr6:148593641..148593643, +
9.18e-26FFCP PHASE2:Hg19::chr9:33797981..33798005,-#_5214680134f586bfbcf2721333e4ccb0p@chr9:33797981..33798005, -
9.18e-26FFCP PHASE2:Hg19::chr3:11675748..11675759,-#_5214680134f586bfbcf2721333e4ccb0p@chr3:11675748..11675759, -
9.18e-26FFCP PHASE1:Hg19::chr5:146890197..146890224,-#_5214680134f586bfbcf2721333e4ccb0p@chr5:146890197..146890224, -
9.18e-26FFCP PHASE1:Hg19::chr4:114257151..114257163,+#_5214680134f586bfbcf2721333e4ccb0p28@ANK2
9.18e-26FFCP PHASE1:Hg19::chr15:71371688..71371691,-#_5214680134f586bfbcf2721333e4ccb0p@chr15:71371688..71371691, -
9.18e-26FFCP PHASE1:Hg19::chr8:37374492..37374499,-#_5214680134f586bfbcf2721333e4ccb0p1@ENST00000521989
9.18e-26FFCP PHASE2:Hg19::chr4:74392579..74392583,+#_5214680134f586bfbcf2721333e4ccb0p@chr4:74392579..74392583, +
9.18e-26FFCP PHASE2:Hg19::chr15:71371688..71371691,-#_5214680134f586bfbcf2721333e4ccb0p@chr15:71371688..71371691, -
9.18e-26FFCP PHASE2:Hg19::chr11:13484984..13484992,+#_5214680134f586bfbcf2721333e4ccb0p5@BC031228
9.18e-26FFCP PHASE1:Hg19::chr8:94712896..94712909,+#_5214680134f586bfbcf2721333e4ccb0p10@FAM92A1
9.18e-26FFCP PHASE1:Hg19::chr2:84316409..84316414,-#_5214680134f586bfbcf2721333e4ccb0p@chr2:84316409..84316414, -
9.18e-26FFCP PHASE2:Hg19::chr19:681941..681952,+#_5214680134f586bfbcf2721333e4ccb0p@chr19:681941..681952, +
9.18e-26FFCP PHASE1:Hg19::chr11:13484984..13484992,+#_5214680134f586bfbcf2721333e4ccb0p5@BC031228
9.18e-26FFCP PHASE1:Hg19::chr2:238116338..238116342,-#_5214680134f586bfbcf2721333e4ccb0p@chr2:238116338..238116342, -
9.18e-26FFCP PHASE2:Hg19::chr1:185703364..185703371,-#_5214680134f586bfbcf2721333e4ccb0p@chr1:185703364..185703371, -
9.18e-26FFCP PHASE1:Hg19::chr6:148593641..148593643,+#_5214680134f586bfbcf2721333e4ccb0p@chr6:148593641..148593643, +
9.18e-26FFCP PHASE1:Hg19::chr9:33797981..33798005,-#_5214680134f586bfbcf2721333e4ccb0p@chr9:33797981..33798005, -
9.18e-26FFCP PHASE2:Hg19::chr8:37374492..37374499,-#_5214680134f586bfbcf2721333e4ccb0p1@ENST00000521989
9.18e-26FFCP PHASE1:Hg19::chr4:74392579..74392583,+#_5214680134f586bfbcf2721333e4ccb0p@chr4:74392579..74392583, +
9.18e-26FFCP PHASE2:Hg19::chr5:146890197..146890224,-#_5214680134f586bfbcf2721333e4ccb0p@chr5:146890197..146890224, -
9.18e-26FFCP PHASE2:Hg19::chr2:84316409..84316414,-#_5214680134f586bfbcf2721333e4ccb0p@chr2:84316409..84316414, -
9.18e-26FFCP PHASE1:Hg19::chr3:11675748..11675759,-#_5214680134f586bfbcf2721333e4ccb0p@chr3:11675748..11675759, -
9.18e-26FFCP PHASE2:Hg19::chr4:114257151..114257163,+#_5214680134f586bfbcf2721333e4ccb0p28@ANK2

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