FFCP PHASE1:Hg19::chr10:130274151..130274153,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:130274151..130274153,- | |||
|coexpression_cluster_id=C204 | |coexpression_cluster_id=C204 | ||
|description=CAGE_peak_at_chr10:130274151..130274153,- | |description=CAGE_peak_at_chr10:130274151..130274153,- |
Latest revision as of 11:40, 23 July 2015
Short description: | p@chr10:130274151..130274153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:130274151..130274153, - |
Coexpression cluster: | C204_Smooth_nasal_CD4_CD19_CD8_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr10:130274151..130274153- |
---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 3.81e-21 | 10 |
vascular associated smooth muscle cell | 1.18e-07 | 32 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 3.81e-21 | 10 |
arterial system smooth muscle | 3.81e-21 | 10 |
artery smooth muscle tissue | 3.81e-21 | 10 |
aorta smooth muscle tissue | 3.81e-21 | 10 |
smooth muscle tissue | 1.22e-14 | 15 |
aorta | 6.74e-11 | 21 |
aortic system | 6.74e-11 | 21 |
systemic artery | 1.82e-07 | 33 |
systemic arterial system | 1.82e-07 | 33 |
Showing 1 to 9 of 9 entries