FFCP PHASE1:Hg19::chr10:5535709..5535712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5535709..5535712,- | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_at_chr10:5535709..5535712,- | |description=CAGE_peak_at_chr10:5535709..5535712,- | ||
|id=chr10:5535709..5535712,- | |id=chr10:5535709..5535712,- | ||
|ontology_enrichment_celltype=CL:0002541!2.17e-54!3;CL:0000039!5.66e-24!7;CL:0000586!5.66e-24!7;CL:0002231!2.97e-07!3 | |ontology_enrichment_celltype=CL:0002541!2.17e-54!3;CL:0000039!5.66e-24!7;CL:0000586!5.66e-24!7;CL:0002231!2.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.78e-29;7!CL:0000586;1.78e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.78e-29,7;CL:0000586,1.78e-29,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!1.56e-19!1;DOID:10165!1.56e-19!1;DOID:1798!1.56e-19!1;DOID:3095!4.55e-08!22;DOID:2994!4.55e-08!22 | |ontology_enrichment_disease=DOID:1799!1.56e-19!1;DOID:10165!1.56e-19!1;DOID:1798!1.56e-19!1;DOID:3095!4.55e-08!22;DOID:2994!4.55e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.17e-54!3;UBERON:0000920!2.17e-54!3;UBERON:0003124!1.66e-41!7;UBERON:0005631!5.11e-21!14;UBERON:0000158!5.11e-21!14;UBERON:0000478!1.98e-12!24;UBERON:0004923!5.26e-08!57 | |ontology_enrichment_uberon=UBERON:0000476!2.17e-54!3;UBERON:0000920!2.17e-54!3;UBERON:0003124!1.66e-41!7;UBERON:0005631!5.11e-21!14;UBERON:0000158!5.11e-21!14;UBERON:0000478!1.98e-12!24;UBERON:0004923!5.26e-08!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr10:5535709..5535712,- | |short_description=p@chr10:5535709..5535712,- | ||
}} | }} |
Latest revision as of 14:12, 23 July 2015
Short description: | p@chr10:5535709..5535712, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5535709..5535712, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.78e-29 | 7 |
germ cell | 1.78e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |