FFCP PHASE1:Hg19::chr10:91043499..91043510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000354541_5end | |association_with_transcript=-11bp_to_ENST00000354541_5end | ||
|cluster_id=chr10:91043499..91043510,+ | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_2_at_ENST00000354541_5end | |description=CAGE_peak_2_at_ENST00000354541_5end | ||
|id=chr10:91043499..91043510,+ | |id=chr10:91043499..91043510,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.33e-07!254;CL:0000239!8.18e-07!3;CL:1000615!8.18e-07!3;CL:0002306!8.18e-07!3 | |ontology_enrichment_celltype=CL:0000066!6.33e-07!254;CL:0000239!8.18e-07!3;CL:1000615!8.18e-07!3;CL:0002306!8.18e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000239;3.56e-27;3!CL:1000615;3.56e-27;3!CL:0002306;3.56e-27;3!CL:0000342;5.16e-21;1!CL:0002565;5.16e-21;1!CL:0002535;2.12e-11;2!CL:1000507;7.36e-09;10!CL:1000494;7.36e-09;10!CL:0002681;1.57e-07;12!CL:0002584;1.57e-07;12!CL:0000075;3.30e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.11e-27,3;CL:1000615,3.11e-27,3;CL:0002306,3.11e-27,3;CL:0000342,6.31e-21,1;CL:0002565,6.31e-21,1;CL:0002535,2.02e-11,2;CL:1000507,7.07e-09,10;CL:1000494,7.07e-09,10;CL:0002681,1.52e-07,12;CL:0002584,1.52e-07,12;CL:0000075,3.16e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!6.11e-07!14 | |ontology_enrichment_disease=DOID:1749!6.11e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.57e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.54e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0000020!1.33e-08!23;UBERON:0000970!1.34e-08!20;UBERON:0000488!3.09e-08!4;UBERON:0001032!4.07e-08!24;UBERON:0004456!4.07e-08!24;UBERON:0002104!4.65e-08!21;UBERON:0000019!1.33e-07!19;UBERON:0000047!1.33e-07!19;UBERON:0004088!1.33e-07!19;UBERON:0003072!1.33e-07!19;UBERON:0003071!1.33e-07!19;UBERON:0004128!1.33e-07!19;UBERON:0007625!1.66e-07!11;UBERON:0001801!3.37e-07!14;UBERON:0006853!8.18e-07!3;UBERON:0007685!8.18e-07!3;UBERON:0004134!8.18e-07!3 | |ontology_enrichment_uberon=UBERON:0000020!1.33e-08!23;UBERON:0000970!1.34e-08!20;UBERON:0000488!3.09e-08!4;UBERON:0001032!4.07e-08!24;UBERON:0004456!4.07e-08!24;UBERON:0002104!4.65e-08!21;UBERON:0000019!1.33e-07!19;UBERON:0000047!1.33e-07!19;UBERON:0004088!1.33e-07!19;UBERON:0003072!1.33e-07!19;UBERON:0003071!1.33e-07!19;UBERON:0004128!1.33e-07!19;UBERON:0007625!1.66e-07!11;UBERON:0001801!3.37e-07!14;UBERON:0006853!8.18e-07!3;UBERON:0007685!8.18e-07!3;UBERON:0004134!8.18e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;3.56e-27;3!UBERON:0007685;3.56e-27;3!UBERON:0004134;3.56e-27;3!UBERON:0002506;5.16e-21;1!UBERON:0001769;5.16e-21;1!UBERON:0006955;2.12e-11;2!UBERON:0004801;2.12e-11;2!UBERON:0004211;7.36e-09;10!UBERON:0009773;7.36e-09;10!UBERON:0001231;7.36e-09;10!UBERON:0004810;7.36e-09;10!UBERON:0007625;3.89e-08;11!UBERON:0001225;1.57e-07;12!UBERON:0008987;1.57e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.11e-27,3;UBERON:0007685,3.11e-27,3;UBERON:0004134,3.11e-27,3;UBERON:0002506,6.31e-21,1;UBERON:0001769,6.31e-21,1;UBERON:0006955,2.02e-11,2;UBERON:0004801,2.02e-11,2;UBERON:0004810,7.07e-09,10;UBERON:0007625,3.90e-08,11;UBERON:0001225,1.52e-07,12;UBERON:0008987,1.52e-07,12 | |||
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| ||
|short_description=p2@ENST00000354541 | |short_description=p2@ENST00000354541 | ||
}} | }} |
Latest revision as of 16:35, 23 July 2015
Short description: | p2@ENST00000354541 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000354541_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -11bp_to_ENST00000354541_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.11e-27 | 3 |
kidney cortex tubule cell | 3.11e-27 | 3 |
epithelial cell of proximal tubule | 3.11e-27 | 3 |
pigment cell (sensu Vertebrata) | 6.31e-21 | 1 |
iris pigment epithelial cell | 6.31e-21 | 1 |
epithelial cell of cervix | 2.02e-11 | 2 |
kidney tubule cell | 7.07e-09 | 10 |
nephron tubule epithelial cell | 7.07e-09 | 10 |
kidney cortical cell | 1.52e-07 | 12 |
renal cortical epithelial cell | 1.52e-07 | 12 |
columnar/cuboidal epithelial cell | 3.16e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 3.11e-27 | 3 |
region of nephron tubule | 3.11e-27 | 3 |
proximal tubule | 3.11e-27 | 3 |
iris epithelium | 6.31e-21 | 1 |
iris | 6.31e-21 | 1 |
uterine epithelium | 2.02e-11 | 2 |
cervix epithelium | 2.02e-11 | 2 |
nephron tubule epithelium | 7.07e-09 | 10 |
pigment epithelium of eye | 3.90e-08 | 11 |
cortex of kidney | 1.52e-07 | 12 |
renal parenchyma | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.54e-13 | 14 |