FFCP PHASE1:Hg19::chr11:119039032..119039058,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=79671 | |EntrezGene=entrezgene:79671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29890 | |HGNC=HGNC:29890 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=C9JQE9 | |UniProt=uniprot:C9JQE9 | ||
|association_with_transcript=0bp_to_ENST00000449394_5end | |association_with_transcript=0bp_to_ENST00000449394_5end | ||
|cluster_id=chr11:119039032..119039058,+ | |||
|coexpression_cluster_id=C683 | |coexpression_cluster_id=C683 | ||
|description=CAGE_peak_5_at_NLRX1_5end | |description=CAGE_peak_5_at_NLRX1_5end | ||
Revision as of 18:58, 23 July 2015
| Short description: | p5@NLRX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_NLRX1_5end |
| Coexpression cluster: | C683_esophagus_tongue_tonsil_Corneal_cervical_Esophageal_throat |
| Association with transcript: | 0bp_to_ENST00000449394_5end |
| EntrezGene: | 79671 |
| HGNC: | 29890 |
| UniProt: | C9JQE9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@NLRX1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| corneal epithelial cell | 5.76e-17 | 2 |
| epithelial cell of esophagus | 3.58e-09 | 1 |
| general ecto-epithelial cell | 4.88e-09 | 14 |
| transitional epithelial cell | 1.98e-08 | 4 |
| urothelial cell | 1.98e-08 | 4 |
| amnion mesenchymal stem cell | 3.57e-07 | 5 |
| acinar cell | 6.76e-07 | 5 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| tongue | 8.80e-12 | 3 |
| gustatory system | 8.80e-12 | 3 |
| future tongue | 8.80e-12 | 3 |
| esophagus | 1.34e-11 | 3 |
| esophageal region | 1.34e-11 | 3 |
| tonsil | 1.89e-09 | 1 |
| mucosa-associated lymphoid tissue | 1.89e-09 | 1 |
| lymphoid tissue | 1.89e-09 | 1 |
| tonsillar ring | 1.89e-09 | 1 |
| surface | 2.40e-09 | 1 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| skin squamous cell carcinoma | 5.31e-09 | 1 |
| keratoacanthoma | 5.31e-09 | 1 |
Showing 1 to 2 of 2 entries
