FFCP PHASE1:Hg19::chr11:127965869..127965894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:127965869..127965894,+ | |||
|coexpression_cluster_id=C195 | |||
|description=CAGE_peak_at_chr11:127965869..127965894,+ | |||
|id=chr11:127965869..127965894,+ | |||
|ontology_enrichment_celltype=CL:0000244!6.93e-19!4;CL:0000731!6.93e-19!4;CL:0002057!1.30e-17!42;CL:0000860!3.15e-16!45;CL:0002194!5.39e-14!63;CL:0000576!5.39e-14!63;CL:0000040!5.39e-14!63;CL:0000559!5.39e-14!63;CL:0002009!1.84e-13!65;CL:0002368!1.59e-12!13;CL:0000839!2.93e-12!70;CL:0000557!4.85e-12!71;CL:0000766!5.00e-11!76;CL:0002573!2.43e-07!2;CL:0002076!4.75e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.15e-24;13!CL:0002573;6.51e-18;2!CL:0000244;1.67e-13;4!CL:0000731;1.67e-13;4!CL:0000860;5.65e-12;33!CL:0002057;5.65e-12;33!CL:0000473;4.99e-10;39!CL:0000234;4.99e-10;39!CL:0002076;1.05e-09;42!CL:0000576;3.28e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.46e-24,13;CL:0002573,7.09e-18,2;CL:0000244,1.43e-13,4;CL:0000731,1.43e-13,4;CL:0002076,1.93e-10,42;CL:0000860,3.49e-10,42;CL:0002057,3.49e-10,42;CL:0000473,7.21e-09,48;CL:0000234,7.21e-09,48;CL:0000223,1.85e-07,58;CL:0002194,5.06e-07,59;CL:0000576,5.06e-07,59;CL:0000040,5.06e-07,59;CL:0000559,5.06e-07,59;CL:0002009,8.76e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;4.62e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.22e-22!5;UBERON:0005910!7.90e-19!6;UBERON:0002371!2.61e-10!80;UBERON:0001474!2.34e-09!86;UBERON:0004765!1.76e-07!101;UBERON:0001434!1.76e-07!101;UBERON:0002390!2.24e-07!102;UBERON:0003061!2.24e-07!102;UBERON:0002405!4.14e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.43e-11;5!UBERON:0005910;2.61e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.79e-11,5;UBERON:0005910,2.35e-09,6 | |||
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| ||
|short_description=p@chr11:127965869..127965894,+ | |||
}} | }} |
Latest revision as of 19:50, 23 July 2015
Short description: | p@chr11:127965869..127965894, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:127965869..127965894, + |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr11:127965869..127965894+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.46e-24 | 13 |
Schwann cell | 7.09e-18 | 2 |
transitional epithelial cell | 1.43e-13 | 4 |
urothelial cell | 1.43e-13 | 4 |
endo-epithelial cell | 1.93e-10 | 42 |
classical monocyte | 3.49e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.49e-10 | 42 |
defensive cell | 7.21e-09 | 48 |
phagocyte | 7.21e-09 | 48 |
endodermal cell | 1.85e-07 | 58 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
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urothelium | 4.79e-11 | 5 |
transitional epithelium | 2.35e-09 | 6 |
Showing 1 to 2 of 2 entries