FFCP PHASE1:Hg19::chr11:64333766..64333772,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:64333766..64333772,- | |||
|description=CAGE_peak_at_chr11:64333766..64333772,- | |description=CAGE_peak_at_chr11:64333766..64333772,- | ||
|id=chr11:64333766..64333772,- | |id=chr11:64333766..64333772,- | ||
|ontology_enrichment_celltype=CL:0000223!6.34e-13!59;CL:0000066!1.58e-12!254;CL:0002076!6.17e-10!43;CL:0000083!1.75e-09!4;CL:0000068!5.33e-08!3;CL:0000069!5.33e-08!3;CL:0000307!5.33e-08!3;CL:0000377!5.33e-08!3;CL:0002251!1.97e-07!21;CL:0002178!4.13e-07!3 | |ontology_enrichment_celltype=CL:0000223!6.34e-13!59;CL:0000066!1.58e-12!254;CL:0002076!6.17e-10!43;CL:0000083!1.75e-09!4;CL:0000068!5.33e-08!3;CL:0000069!5.33e-08!3;CL:0000307!5.33e-08!3;CL:0000377!5.33e-08!3;CL:0002251!1.97e-07!21;CL:0002178!4.13e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1001319;3.28e-23;1!CL:1000600;3.28e-23;1!CL:0002535;2.59e-12;2!CL:0000307;1.21e-08;3 | |ontology_enrichment_celltype_v019=CL:1001319;3.28e-23;1!CL:1000600;3.28e-23;1!CL:0002535;2.59e-12;2!CL:0000307;1.21e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.67e-23,1;CL:1000600,1.67e-23,1;CL:0002535,2.07e-12,2;CL:0000068,1.51e-08,3;CL:0000069,1.51e-08,3;CL:0000307,1.51e-08,3;CL:0000377,1.51e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.21e-08;3 | |ontology_enrichment_development_v019=CL:0000377;1.21e-08;3 | ||
|ontology_enrichment_disease=DOID:0050687!1.13e-27!143;DOID:305!1.08e-26!106;DOID:14566!3.74e-19!239;DOID:162!5.11e-19!235;DOID:1749!2.44e-16!14;DOID:1793!1.75e-09!4;DOID:299!2.49e-08!25;DOID:3095!3.71e-08!22;DOID:2994!3.71e-08!22;DOID:7!7.84e-08!39;DOID:3119!6.66e-07!14 | |ontology_enrichment_disease=DOID:0050687!1.13e-27!143;DOID:305!1.08e-26!106;DOID:14566!3.74e-19!239;DOID:162!5.11e-19!235;DOID:1749!2.44e-16!14;DOID:1793!1.75e-09!4;DOID:299!2.49e-08!25;DOID:3095!3.71e-08!22;DOID:2994!3.71e-08!22;DOID:7!7.84e-08!39;DOID:3119!6.66e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.53e-25;14!DOID:3112;3.28e-23;1 | |ontology_enrichment_disease_v019=DOID:1749;1.53e-25;14!DOID:3112;3.28e-23;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.44e-25,14;DOID:3112,5.13e-23,1;DOID:305,4.34e-10,106;DOID:0050687,2.02e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000344!4.84e-09!12;UBERON:0003729!5.28e-08!5 | |ontology_enrichment_uberon=UBERON:0000344!4.84e-09!12;UBERON:0003729!5.28e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.28e-23;1!UBERON:0001256;3.28e-23;1!UBERON:0001259;3.28e-23;1!UBERON:0006562;1.65e-12;2!UBERON:0001255;2.59e-12;2!UBERON:0006955;2.59e-12;2!UBERON:0004801;2.59e-12;2!UBERON:0001556;2.59e-12;2!UBERON:0003343;8.61e-07;4!UBERON:0004785;8.61e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004645;3.28e-23;1!UBERON:0001256;3.28e-23;1!UBERON:0001259;3.28e-23;1!UBERON:0006562;1.65e-12;2!UBERON:0001255;2.59e-12;2!UBERON:0006955;2.59e-12;2!UBERON:0004801;2.59e-12;2!UBERON:0001556;2.59e-12;2!UBERON:0003343;8.61e-07;4!UBERON:0004785;8.61e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.67e-23,1;UBERON:0001256,1.67e-23,1;UBERON:0001259,1.67e-23,1;UBERON:0001255,1.85e-12,2;UBERON:0001556,1.85e-12,2;UBERON:0006955,2.07e-12,2;UBERON:0004801,2.07e-12,2;UBERON:0003343,8.61e-07,4;UBERON:0004785,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.735120647943095,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,3.18621655199399,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0,1.35291077473043,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,1.56706571844725,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0.288180834308212,0,0,0.288109595976299,0,0.471388069233591,0.815425236441684,0.627617077873999,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.275078873194468,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.786329709279482,0,0,0,0.123935764259002,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,1.29766695682514,0.366857197043358,0.346576998451015,0,0,0,0,0,0,0.261906694481422,1.14640342257068,0.147856086217045,0,0.781078098613847,0,0,0,0,0,0,2.04419884223352,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,1.2498775702396,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0.437062287854782,0,0.203977659483963,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,1.70946864083046,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.735120647943095,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,3.18621655199399,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0,1.35291077473043,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,1.56706571844725,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0.288180834308212,0,0,0.288109595976299,0,0.471388069233591,0.815425236441684,0.627617077873999,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.275078873194468,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.786329709279482,0,0,0,0.123935764259002,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,1.29766695682514,0.366857197043358,0.346576998451015,0,0,0,0,0,0,0.261906694481422,1.14640342257068,0.147856086217045,0,0.781078098613847,0,0,0,0,0,0,2.04419884223352,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,1.2498775702396,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0.437062287854782,0,0.203977659483963,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,1.70946864083046,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr11:64333766..64333772,- | |short_description=p@chr11:64333766..64333772,- | ||
}} | }} |
Latest revision as of 00:15, 24 July 2015
Short description: | p@chr11:64333766..64333772, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:64333766..64333772, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.67e-23 | 1 |
lower urinary tract cell | 1.67e-23 | 1 |
epithelial cell of cervix | 2.07e-12 | 2 |
duct epithelial cell | 1.51e-08 | 3 |
branched duct epithelial cell | 1.51e-08 | 3 |
tracheal epithelial cell | 1.51e-08 | 3 |
tracheoblast | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.67e-23 | 1 |
wall of urinary bladder | 1.67e-23 | 1 |
mucosa of urinary bladder | 1.67e-23 | 1 |
urinary bladder | 1.85e-12 | 2 |
lower urinary tract | 1.85e-12 | 2 |
uterine epithelium | 2.07e-12 | 2 |
cervix epithelium | 2.07e-12 | 2 |
mucosa of oral region | 8.61e-07 | 4 |
respiratory system mucosa | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.44e-25 | 14 |
papillary adenocarcinoma | 5.13e-23 | 1 |
carcinoma | 4.34e-10 | 106 |
cell type cancer | 2.02e-07 | 143 |