FFCP PHASE1:Hg19::chr11:67166063..67166093,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_CU675898_5end | |association_with_transcript=56bp_to_CU675898_5end | ||
|cluster_id=chr11:67166063..67166093,+ | |||
|description=CAGE_peak_1_at_CU675898_5end | |description=CAGE_peak_1_at_CU675898_5end | ||
|id=chr11:67166063..67166093,+ | |id=chr11:67166063..67166093,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.87e-11!254;CL:1000449!1.24e-08!16;CL:0000003!1.68e-08!722;CL:0000220!2.28e-08!246;CL:0002321!3.00e-08!248;CL:0000548!6.93e-08!679;CL:0000004!6.93e-08!679;CL:0000255!6.93e-08!679;CL:0002681!1.11e-07!13;CL:0002584!1.11e-07!13;CL:0000012!1.85e-07!682;CL:1000497!6.91e-07!18;CL:0002518!6.91e-07!18 | |ontology_enrichment_celltype=CL:0000066!5.87e-11!254;CL:1000449!1.24e-08!16;CL:0000003!1.68e-08!722;CL:0000220!2.28e-08!246;CL:0002321!3.00e-08!248;CL:0000548!6.93e-08!679;CL:0000004!6.93e-08!679;CL:0000255!6.93e-08!679;CL:0002681!1.11e-07!13;CL:0002584!1.11e-07!13;CL:0000012!1.85e-07!682;CL:1000497!6.91e-07!18;CL:0002518!6.91e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.11e-09;15!CL:0002681;7.36e-09;12!CL:0002584;7.36e-09;12!CL:1000497;1.26e-07;17!CL:0002518;1.26e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.99e-10,15;CL:0002681,2.88e-09,12;CL:0002584,2.88e-09,12;CL:0000066,3.09e-08,253;CL:1000497,6.12e-08,17;CL:0002518,6.12e-08,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!1.24e-08!16;UBERON:0001285!1.24e-08!16;UBERON:0007684!1.24e-08!16;UBERON:0003220!1.24e-08!16;UBERON:0004208!1.24e-08!16;UBERON:0000353!3.52e-08!17;UBERON:0001851!4.50e-08!16;UBERON:0006555!6.52e-08!17;UBERON:0005103!6.52e-08!17;UBERON:0000083!6.52e-08!17;UBERON:0009201!6.52e-08!17;UBERON:0004819!6.52e-08!17;UBERON:0006553!6.52e-08!17;UBERON:0003074!6.52e-08!17;UBERON:0003060!6.52e-08!17;UBERON:0001225!1.11e-07!13;UBERON:0008987!1.11e-07!13;UBERON:0000080!2.54e-07!18;UBERON:0002120!2.54e-07!18;UBERON:0004875!2.54e-07!18;UBERON:0005721!2.54e-07!18;UBERON:0005754!2.54e-07!18;UBERON:0007297!2.54e-07!18 | |ontology_enrichment_uberon=UBERON:0004211!1.24e-08!16;UBERON:0001285!1.24e-08!16;UBERON:0007684!1.24e-08!16;UBERON:0003220!1.24e-08!16;UBERON:0004208!1.24e-08!16;UBERON:0000353!3.52e-08!17;UBERON:0001851!4.50e-08!16;UBERON:0006555!6.52e-08!17;UBERON:0005103!6.52e-08!17;UBERON:0000083!6.52e-08!17;UBERON:0009201!6.52e-08!17;UBERON:0004819!6.52e-08!17;UBERON:0006553!6.52e-08!17;UBERON:0003074!6.52e-08!17;UBERON:0003060!6.52e-08!17;UBERON:0001225!1.11e-07!13;UBERON:0008987!1.11e-07!13;UBERON:0000080!2.54e-07!18;UBERON:0002120!2.54e-07!18;UBERON:0004875!2.54e-07!18;UBERON:0005721!2.54e-07!18;UBERON:0005754!2.54e-07!18;UBERON:0007297!2.54e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.11e-09;15!UBERON:0004819;2.11e-09;15!UBERON:0001285;2.11e-09;15!UBERON:0007684;2.11e-09;15!UBERON:0001225;7.36e-09;12!UBERON:0008987;7.36e-09;12!UBERON:0000353;7.57e-09;15!UBERON:0001851;1.28e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,8.99e-10,15;UBERON:0009773,8.99e-10,15;UBERON:0001231,8.99e-10,15;UBERON:0001285,8.99e-10,15;UBERON:0007684,8.99e-10,15;UBERON:0004208,8.99e-10,15;UBERON:0000353,2.29e-09,15;UBERON:0001225,2.88e-09,12;UBERON:0008987,2.88e-09,12;UBERON:0001851,4.89e-09,15;UBERON:0006555,8.58e-09,16;UBERON:0004819,8.58e-09,16 | |||
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| ||
|short_description=p1@CU675898 | |short_description=p1@CU675898 | ||
}} | }} |
Latest revision as of 01:39, 24 July 2015
Short description: | p1@CU675898 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU675898_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_CU675898_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.99e-10 | 15 |
kidney cortical cell | 2.88e-09 | 12 |
renal cortical epithelial cell | 2.88e-09 | 12 |
epithelial cell | 3.09e-08 | 253 |
kidney cell | 6.12e-08 | 17 |
kidney epithelial cell | 6.12e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 8.99e-10 | 15 |
renal tubule | 8.99e-10 | 15 |
nephron tubule | 8.99e-10 | 15 |
nephron | 8.99e-10 | 15 |
uriniferous tubule | 8.99e-10 | 15 |
nephrogenic mesenchyme | 8.99e-10 | 15 |
parenchyma | 2.29e-09 | 15 |
cortex of kidney | 2.88e-09 | 12 |
renal parenchyma | 2.88e-09 | 12 |
cortex | 4.89e-09 | 15 |
excretory tube | 8.58e-09 | 16 |
kidney epithelium | 8.58e-09 | 16 |