FFCP PHASE1:Hg19::chr12:108985346..108985363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:108985346..108985363,- | |||
|coexpression_cluster_id=C2182 | |coexpression_cluster_id=C2182 | ||
|description=CAGE_peak_at_chr12:108985346..108985363,- | |description=CAGE_peak_at_chr12:108985346..108985363,- | ||
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|ontology_enrichment_celltype=CL:0000057!8.36e-22!75;CL:0002334!2.69e-19!12;CL:0000055!1.18e-18!180;CL:0000136!1.91e-13!15;CL:0000048!6.83e-12!430;CL:0000723!1.88e-11!436;CL:0000034!1.95e-11!444;CL:0002552!1.28e-10!5;CL:0002320!3.36e-10!365;CL:0000134!3.96e-10!358;CL:0002620!1.97e-09!23;CL:0000188!2.71e-09!9;CL:0000219!8.65e-09!390;CL:0002615!5.40e-08!3;CL:0002371!1.21e-07!591;CL:0002579!4.58e-07!3 | |ontology_enrichment_celltype=CL:0000057!8.36e-22!75;CL:0002334!2.69e-19!12;CL:0000055!1.18e-18!180;CL:0000136!1.91e-13!15;CL:0000048!6.83e-12!430;CL:0000723!1.88e-11!436;CL:0000034!1.95e-11!444;CL:0002552!1.28e-10!5;CL:0002320!3.36e-10!365;CL:0000134!3.96e-10!358;CL:0002620!1.97e-09!23;CL:0000188!2.71e-09!9;CL:0000219!8.65e-09!390;CL:0002615!5.40e-08!3;CL:0002371!1.21e-07!591;CL:0002579!4.58e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.02e-32;3!CL:0000136;4.05e-29;13!CL:0002617;1.49e-22;2!CL:0000346;4.59e-15;3!CL:1000428;4.59e-15;3!CL:0002580;4.59e-15;3!CL:0002334;2.77e-14;12!CL:0002581;5.04e-12;1!CL:0002616;1.13e-11;1!CL:0002559;2.08e-09;5 | |ontology_enrichment_celltype_v019=CL:0002615;1.02e-32;3!CL:0000136;4.05e-29;13!CL:0002617;1.49e-22;2!CL:0000346;4.59e-15;3!CL:1000428;4.59e-15;3!CL:0002580;4.59e-15;3!CL:0002334;2.77e-14;12!CL:0002581;5.04e-12;1!CL:0002616;1.13e-11;1!CL:0002559;2.08e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.43e-34,15;CL:0002615,1.27e-32,3;CL:0002617,1.34e-22,2;CL:0000346,3.72e-15,3;CL:1000428,3.72e-15,3;CL:0002580,5.30e-15,3;CL:0002334,3.24e-14,12;CL:0002581,4.06e-12,1;CL:0002616,6.97e-12,1;CL:0002559,1.84e-09,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.16e-15!12;UBERON:0000042!1.16e-15!12;UBERON:0003688!2.22e-13!6;UBERON:0002358!2.22e-13!6;UBERON:0003684!2.22e-13!6;UBERON:0001178!2.22e-13!6;UBERON:0003102!8.89e-11!95;UBERON:0002384!1.79e-09!375;UBERON:0001013!1.57e-08!14;UBERON:0002199!1.72e-08!45;UBERON:0002416!1.72e-08!45;UBERON:0004923!2.88e-07!57 | |ontology_enrichment_uberon=UBERON:0004457!1.16e-15!12;UBERON:0000042!1.16e-15!12;UBERON:0003688!2.22e-13!6;UBERON:0002358!2.22e-13!6;UBERON:0003684!2.22e-13!6;UBERON:0001178!2.22e-13!6;UBERON:0003102!8.89e-11!95;UBERON:0002384!1.79e-09!375;UBERON:0001013!1.57e-08!14;UBERON:0002199!1.72e-08!45;UBERON:0002416!1.72e-08!45;UBERON:0004923!2.88e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.58e-28;6!UBERON:0002358;1.58e-28;6!UBERON:0003684;1.58e-28;6!UBERON:0001178;1.58e-28;6!UBERON:0005406;6.33e-22;2!UBERON:0004457;3.92e-19;9!UBERON:0000042;3.92e-19;9!UBERON:0000310;2.48e-17;10!UBERON:0001443;8.82e-16;11!UBERON:0000412;4.59e-15;3!UBERON:0001992;4.59e-15;3!UBERON:0002073;2.08e-09;5!UBERON:0001013;2.86e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.58e-28;6!UBERON:0002358;1.58e-28;6!UBERON:0003684;1.58e-28;6!UBERON:0001178;1.58e-28;6!UBERON:0005406;6.33e-22;2!UBERON:0004457;3.92e-19;9!UBERON:0000042;3.92e-19;9!UBERON:0000310;2.48e-17;10!UBERON:0001443;8.82e-16;11!UBERON:0000412;4.59e-15;3!UBERON:0001992;4.59e-15;3!UBERON:0002073;2.08e-09;5!UBERON:0001013;2.86e-07;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.51e-28,6;UBERON:0002358,2.51e-28,6;UBERON:0003684,2.51e-28,6;UBERON:0001178,2.51e-28,6;UBERON:0005406,3.17e-22,2;UBERON:0000310,2.59e-17,10;UBERON:0001443,9.17e-16,11;UBERON:0000412,3.72e-15,3;UBERON:0001992,3.72e-15,3;UBERON:0004457,2.54e-14,12;UBERON:0000042,2.54e-14,12;UBERON:0002073,1.84e-09,5;UBERON:0005086,1.84e-09,5;UBERON:0004923,2.97e-09,66;UBERON:0001013,2.30e-07,14 | |||
|phase1_expression=2.90685406832891,7.70761886007539,2.39622486963151,2.00146596706261,5.36353313312745,1.74467704820074,0,0,0.522371256399677,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.298897361103602,0,0.485618833104395,0,0.204154171254893,0.61417158655884,0.413303124703062,1.18800285728205,0.494533858557114,0,0,0,0.375355559615893,0,0,1.5324389789951,0.150238058906597,0,0,0.427114777637135,0.423863802319124,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,3.21620469096443,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,1.07057393278297,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,1.24053903909388,0,3.08726103876381,0.896974044789907,1.02341449813341,0.160853921143607,2.96836132889982,0.154209693802656,0.532685175939381,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,0,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.330037999682352,0,0,0,0.193341436584244,0.154048617114644,0,0.275673144969061,0.107420244868274,0.580066775656914,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0.251567901752575,0,0,0.453692771289717,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,1.71697852591396,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 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|phase1_expression=2.90685406832891,7.70761886007539,2.39622486963151,2.00146596706261,5.36353313312745,1.74467704820074,0,0,0.522371256399677,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.298897361103602,0,0.485618833104395,0,0.204154171254893,0.61417158655884,0.413303124703062,1.18800285728205,0.494533858557114,0,0,0,0.375355559615893,0,0,1.5324389789951,0.150238058906597,0,0,0.427114777637135,0.423863802319124,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,3.21620469096443,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,1.07057393278297,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,1.24053903909388,0,3.08726103876381,0.896974044789907,1.02341449813341,0.160853921143607,2.96836132889982,0.154209693802656,0.532685175939381,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,0,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.330037999682352,0,0,0,0.193341436584244,0.154048617114644,0,0.275673144969061,0.107420244868274,0.580066775656914,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0.251567901752575,0,0,0.453692771289717,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,1.71697852591396,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr12:108985346..108985363,- | |short_description=p@chr12:108985346..108985363,- | ||
}} | }} |
Latest revision as of 04:38, 24 July 2015
Short description: | p@chr12:108985346..108985363, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:108985346..108985363, - |
Coexpression cluster: | C2182_Mesenchymal_Adipocyte_Hair_Preadipocyte_osteosarcoma_Saos2_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.43e-34 | 15 |
adipocyte of omentum tissue | 1.27e-32 | 3 |
adipocyte of breast | 1.34e-22 | 2 |
hair follicle dermal papilla cell | 3.72e-15 | 3 |
stem cell of epidermis | 3.72e-15 | 3 |
preadipocyte of the breast | 5.30e-15 | 3 |
preadipocyte | 3.24e-14 | 12 |
perirenal preadipocyte | 4.06e-12 | 1 |
perirenal adipocyte cell | 6.97e-12 | 1 |
hair follicle cell | 1.84e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.51e-28 | 6 |
peritoneum | 2.51e-28 | 6 |
abdominal cavity | 2.51e-28 | 6 |
visceral peritoneum | 2.51e-28 | 6 |
perirenal fat | 3.17e-22 | 2 |
breast | 2.59e-17 | 10 |
chest | 9.17e-16 | 11 |
dermal papilla | 3.72e-15 | 3 |
papillary layer of dermis | 3.72e-15 | 3 |
cavity lining | 2.54e-14 | 12 |
serous membrane | 2.54e-14 | 12 |
hair follicle | 1.84e-09 | 5 |
hair follicle placode | 1.84e-09 | 5 |
organ component layer | 2.97e-09 | 66 |
adipose tissue | 2.30e-07 | 14 |