Personal tools

FFCP PHASE1:Hg19::chr12:15035058..15035069,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr12:15035058..15035069,+
|coexpression_cluster_id=C491
|description=CAGE_peak_at_chr12:15035058..15035069,+
|description=CAGE_peak_at_chr12:15035058..15035069,+
|id=chr12:15035058..15035069,+
|id=chr12:15035058..15035069,+
|ontology_enrichment_celltype=CL:0002615!3.98e-19!3;CL:0000136!3.48e-14!15;CL:0002579!1.88e-08!3;CL:0002616!1.46e-07!1
|ontology_enrichment_celltype=CL:0002615!3.98e-19!3;CL:0000136!3.48e-14!15;CL:0002579!1.88e-08!3;CL:0002616!1.46e-07!1
|ontology_enrichment_celltype_v019=CL:0002615;9.50e-118;3!CL:0000136;7.52e-76;13!CL:0002616;6.62e-41;1!CL:0002617;6.30e-21;2
|ontology_enrichment_celltype_v019_2=CL:0002615,7.78e-118,3;CL:0000136,7.04e-66,15;CL:0002616,6.62e-41,1;CL:0002617,6.96e-21,2
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:3369!2.52e-07!1
|ontology_enrichment_disease=DOID:3369!2.52e-07!1
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003688!1.28e-24!6;UBERON:0002358!1.28e-24!6;UBERON:0003684!1.28e-24!6;UBERON:0001178!1.28e-24!6;UBERON:0004457!3.29e-12!12;UBERON:0000042!3.29e-12!12;UBERON:0002323!1.03e-08!46;UBERON:0003978!1.44e-08!3;UBERON:0009751!1.44e-08!3;UBERON:0000946!1.44e-08!3;UBERON:0002523!1.44e-08!3;UBERON:0005983!1.44e-08!3;UBERON:0002165!1.44e-08!3;UBERON:0002062!1.44e-08!3;UBERON:0007280!1.44e-08!3;UBERON:0004458!4.31e-08!49;UBERON:0006122!2.23e-07!1;UBERON:0000998!2.84e-07!1;UBERON:0006868!2.84e-07!1;UBERON:0002135!4.06e-07!1;UBERON:0002146!5.78e-07!1;UBERON:0005623!5.78e-07!1;UBERON:0002363!7.73e-07!1;UBERON:0007647!7.73e-07!1;UBERON:0010115!7.73e-07!1;UBERON:0007023!9.83e-07!115
|ontology_enrichment_uberon=UBERON:0003688!1.28e-24!6;UBERON:0002358!1.28e-24!6;UBERON:0003684!1.28e-24!6;UBERON:0001178!1.28e-24!6;UBERON:0004457!3.29e-12!12;UBERON:0000042!3.29e-12!12;UBERON:0002323!1.03e-08!46;UBERON:0003978!1.44e-08!3;UBERON:0009751!1.44e-08!3;UBERON:0000946!1.44e-08!3;UBERON:0002523!1.44e-08!3;UBERON:0005983!1.44e-08!3;UBERON:0002165!1.44e-08!3;UBERON:0002062!1.44e-08!3;UBERON:0007280!1.44e-08!3;UBERON:0004458!4.31e-08!49;UBERON:0006122!2.23e-07!1;UBERON:0000998!2.84e-07!1;UBERON:0006868!2.84e-07!1;UBERON:0002135!4.06e-07!1;UBERON:0002146!5.78e-07!1;UBERON:0005623!5.78e-07!1;UBERON:0002363!7.73e-07!1;UBERON:0007647!7.73e-07!1;UBERON:0010115!7.73e-07!1;UBERON:0007023!9.83e-07!115
|ontology_enrichment_uberon_v019=UBERON:0003688;1.65e-59;6!UBERON:0002358;1.65e-59;6!UBERON:0003684;1.65e-59;6!UBERON:0001178;1.65e-59;6!UBERON:0004457;4.65e-40;9!UBERON:0000042;4.65e-40;9!UBERON:0005406;3.11e-21;2
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.49e-59,6;UBERON:0002358,1.49e-59,6;UBERON:0003684,1.49e-59,6;UBERON:0001178,1.49e-59,6;UBERON:0004457,2.45e-30,12;UBERON:0000042,2.45e-30,12;UBERON:0005406,3.11e-21,2;UBERON:0002323,1.47e-08,46;UBERON:0004458,4.43e-08,49;UBERON:0003886,2.12e-07,54;UBERON:0002417,9.92e-07,60;UBERON:0000916,9.92e-07,60
|phase1_expression=1.2717486548939,0,1.55049844505568,9.00659685178174,10.2801051718276,24.4254786748103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0.354668382198357,0,0,0,0,0.404132016209064,0.817309515567294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0
|phase1_expression=1.2717486548939,0,1.55049844505568,9.00659685178174,10.2801051718276,24.4254786748103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0.354668382198357,0,0,0,0,0.404132016209064,0.817309515567294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr12:15035058..15035069,+
|short_description=p@chr12:15035058..15035069,+
}}
}}

Latest revision as of 07:06, 24 July 2015

Short description:p@chr12:15035058..15035069, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr12:15035058..15035069, +
Coexpression cluster:C491_Adipocyte_dura_aorta_Preadipocyte_heart_Fibroblast_epididymis
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data