FFCP PHASE1:Hg19::chr12:56651608..56651612,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56651608..56651612,- | |||
|description=CAGE_peak_at_chr12:56651608..56651612,- | |description=CAGE_peak_at_chr12:56651608..56651612,- | ||
|id=chr12:56651608..56651612,- | |id=chr12:56651608..56651612,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002577;8.57e-13;3!CL:0002601;6.05e-10;1 | |ontology_enrichment_celltype_v019=CL:0002577;8.57e-13;3!CL:0002601;6.05e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.51e-13,3;CL:0002601,9.82e-10,1;CL:0000540,8.89e-07,6;CL:0000031,8.89e-07,6;CL:0000404,8.89e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.80e-10;1 | |ontology_enrichment_development_v019=UBERON:0009143;1.80e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.18e-10!86;UBERON:0001017!2.38e-09!82;UBERON:0000475!8.53e-09!365;UBERON:0000119!1.06e-08!312;UBERON:0000073!1.23e-08!94;UBERON:0001016!1.23e-08!94;UBERON:0001049!2.05e-08!57;UBERON:0005068!2.05e-08!57;UBERON:0006241!2.05e-08!57;UBERON:0007135!2.05e-08!57;UBERON:0000483!3.56e-08!309;UBERON:0003075!6.77e-08!86;UBERON:0007284!6.77e-08!86;UBERON:0002346!2.15e-07!90;UBERON:0000481!2.69e-07!347;UBERON:0000955!6.35e-07!69;UBERON:0006238!6.35e-07!69;UBERON:0003056!8.57e-07!61 | |ontology_enrichment_uberon=UBERON:0005743!6.18e-10!86;UBERON:0001017!2.38e-09!82;UBERON:0000475!8.53e-09!365;UBERON:0000119!1.06e-08!312;UBERON:0000073!1.23e-08!94;UBERON:0001016!1.23e-08!94;UBERON:0001049!2.05e-08!57;UBERON:0005068!2.05e-08!57;UBERON:0006241!2.05e-08!57;UBERON:0007135!2.05e-08!57;UBERON:0000483!3.56e-08!309;UBERON:0003075!6.77e-08!86;UBERON:0007284!6.77e-08!86;UBERON:0002346!2.15e-07!90;UBERON:0000481!2.69e-07!347;UBERON:0000955!6.35e-07!69;UBERON:0006238!6.35e-07!69;UBERON:0003056!8.57e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;6.05e-10;1!UBERON:0001987;8.07e-10;4 | |ontology_enrichment_uberon_v019=UBERON:0007195;6.05e-10;1!UBERON:0001987;8.07e-10;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,5.81e-10,4;UBERON:0004340,5.81e-10,4;UBERON:0007195,8.24e-10,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.635795703478686,0.300091096084402,0.206105058476878,0,0,0,0.974370051611986,0.252433774244115,0.0920498986422993,0,0,0.705264687593482,0.339121184620975,0,0,0,0.243947412259191,0.530119073285941,0.813357600086629,0.10366105501537,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0.982827216677626,0,0,0,0.171567810298526,0,1.1240175325762,0,0,0.651616610620649,0,0,0.231860809950154,0.117408694235822,0.577465791044295,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,1.64648067356154,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0.535286966391485,0,0,0,2.27407504055985,2.0694614258501,0.664225598535437,0.368738337083406,0.434418072340414,0.587403472388222,0,0,0,0,6.36567900037145,1.66435439510497,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0.483437798366489,0,0,0.459257792658427,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.534192213880424,0,0.192190067365106,0,0,0,0,0.6970372701606,0,0,2.60979897622522,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0.255897791311334,0,0.636406495851874,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0.545999645631943,0.141405431953713,0,0,0.66343897524122,0,0,0,0.608731130888112,0.6196469961995,0,0.573645408816206,0.196498082026242,0,1.06428319221179,0,0,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0.140669416410513,0,0.329607748453519,0,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0.718946809178615,0,0,1.1837208676432,0,1.11136990144637,0,1.29875337426592,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0.241192877250816,0,0.995213339381022,0.295547618953547,1.09692698576986,0,0.139423744278603,0.692552326534174,0,0.46112780877612,0.538545866458633,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0.37950746544837,0.158936578980379,0,0.489698424477443,0.848118428603645,0,0,0.973033209536731,0,0,0.370691816839509,0.104421949505455,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0,0.60129367765797,0.414752765588989,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.609414446062818,0,0.171986032471617,0,0.0730893170861856,0.0821154570532092,4.26751672549045,0.264768380074501,0,0,0.397429223405979,0.126621591911757,0.391102765469606,0,0,0,0.288180834308212,0,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,0.407992870545287,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0.0846733320657845,0,0.408610218334727,1.44677833618517,1.65047323916681,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,1.19730191562487,0,0.340776043570843,0,0,0,0.129282956361551,0.92562821219883,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.876336514945499,1.14681839138014,0.443716206147409,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0.176689145945881,0.38582807654183,0,0,0,0,0.967809053062115,0,0.3985945209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| ||
|short_description=p@chr12:56651608..56651612,- | |short_description=p@chr12:56651608..56651612,- | ||
}} | }} |
Latest revision as of 10:22, 24 July 2015
Short description: | p@chr12:56651608..56651612, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56651608..56651612, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.51e-13 | 3 |
uterine smooth muscle cell | 9.82e-10 | 1 |
neuron | 8.89e-07 | 6 |
neuroblast | 8.89e-07 | 6 |
electrically signaling cell | 8.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
placenta | 5.81e-10 | 4 |
allantois | 5.81e-10 | 4 |
stroma of bone marrow | 8.24e-10 | 1 |