FFCP PHASE1:Hg19::chr12:59314479..59314490,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000547590_5end | |association_with_transcript=59bp_to_ENST00000547590_5end | ||
|cluster_id=chr12:59314479..59314490,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_1_at_ENST00000547590_5end | |description=CAGE_peak_1_at_ENST00000547590_5end | ||
|id=chr12:59314479..59314490,+ | |id=chr12:59314479..59314490,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002564;2.89e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.05e-34;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!5.68e-07!155;UBERON:0001555!5.68e-07!155;UBERON:0007026!5.68e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;2.89e-12;3!UBERON:0011135;7.01e-08;5!UBERON:0002216;7.01e-08;5!UBERON:0011134;7.01e-08;5!UBERON:0002209;7.01e-08;5!UBERON:0002213;7.01e-08;5!UBERON:0007844;7.01e-08;5!UBERON:0011138;7.01e-08;5!UBERON:0001130;7.01e-08;5!UBERON:0001066;7.01e-08;5!UBERON:0001468;7.01e-08;5!UBERON:0001044;8.97e-07;6!UBERON:0003293;8.97e-07;6!UBERON:0003294;8.97e-07;6!UBERON:0010047;8.97e-07;6!UBERON:0003408;8.97e-07;6!UBERON:0000167;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,3.24e-12,3;UBERON:0003068,3.24e-12,3;UBERON:0002328,3.24e-12,3;UBERON:0004880,3.24e-12,3;UBERON:0011135,7.49e-08,5;UBERON:0002216,7.49e-08,5;UBERON:0011134,7.49e-08,5;UBERON:0002209,7.49e-08,5;UBERON:0002213,7.49e-08,5;UBERON:0005856,7.49e-08,5;UBERON:0005866,7.49e-08,5;UBERON:0005863,7.49e-08,5;UBERON:0007844,7.49e-08,5;UBERON:0011138,7.49e-08,5;UBERON:0001130,7.49e-08,5;UBERON:0001066,7.49e-08,5;UBERON:0001468,7.49e-08,5;UBERON:0001044,8.48e-07,6;UBERON:0003293,8.48e-07,6;UBERON:0003294,8.48e-07,6;UBERON:0010047,8.48e-07,6;UBERON:0000167,8.48e-07,6 | |||
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| ||
|short_description=p1@ENST00000547590 | |short_description=p1@ENST00000547590 | ||
}} | }} |
Latest revision as of 11:02, 24 July 2015
Short description: | p1@ENST00000547590 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000547590_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 59bp_to_ENST00000547590_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 3.24e-12 | 3 |
axial mesoderm | 3.24e-12 | 3 |
notochord | 3.24e-12 | 3 |
chordamesoderm | 3.24e-12 | 3 |
intervertebral cartilage | 7.49e-08 | 5 |
symphysis | 7.49e-08 | 5 |
nonsynovial joint | 7.49e-08 | 5 |
fibrous joint | 7.49e-08 | 5 |
cartilaginous joint | 7.49e-08 | 5 |
developing mesenchymal condensation | 7.49e-08 | 5 |
pre-cartilage condensation | 7.49e-08 | 5 |
cartilaginous condensation | 7.49e-08 | 5 |
cartilage element | 7.49e-08 | 5 |
post-cranial axial skeletal system | 7.49e-08 | 5 |
vertebral column | 7.49e-08 | 5 |
intervertebral disk | 7.49e-08 | 5 |
intervertebral joint | 7.49e-08 | 5 |
saliva-secreting gland | 8.48e-07 | 6 |
gland of oral region | 8.48e-07 | 6 |
gland of foregut | 8.48e-07 | 6 |
oral gland | 8.48e-07 | 6 |
oral cavity | 8.48e-07 | 6 |