FFCP PHASE1:Hg19::chr12:6344660..6344678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6344660..6344678,+ | |||
|coexpression_cluster_id=C3314 | |||
|description=CAGE_peak_at_chr12:6344660..6344678,+ | |description=CAGE_peak_at_chr12:6344660..6344678,+ | ||
|id=chr12:6344660..6344678,+ | |id=chr12:6344660..6344678,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.73e-17!254;CL:0000213!3.31e-09!57;CL:0000215!3.31e-09!57;CL:0002078!4.33e-09!44;CL:0000115!5.54e-09!35;CL:0002139!8.12e-09!24;CL:0002321!3.59e-08!248;CL:0000220!7.50e-08!246;CL:0000076!1.13e-07!62;CL:0000071!9.35e-07!18;CL:0002546!9.35e-07!18 | |ontology_enrichment_celltype=CL:0000066!2.73e-17!254;CL:0000213!3.31e-09!57;CL:0000215!3.31e-09!57;CL:0002078!4.33e-09!44;CL:0000115!5.54e-09!35;CL:0002139!8.12e-09!24;CL:0002321!3.59e-08!248;CL:0000220!7.50e-08!246;CL:0000076!1.13e-07!62;CL:0000071!9.35e-07!18;CL:0002546!9.35e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.21e-08;24!CL:0000115;4.99e-08;36!CL:0002078;9.58e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.47e-14,253;CL:0000115,2.05e-09,36;CL:0002139,2.73e-09,24;CL:0002078,3.94e-09,45;CL:0000213,2.28e-08,58;CL:0000215,2.28e-08,58;CL:0000071,8.38e-07,18;CL:0002546,8.38e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.86e-16!659;UBERON:0000480!2.00e-14!626;UBERON:0000467!2.27e-14!625;UBERON:0000922!8.92e-14!612;UBERON:0002050!1.15e-11!605;UBERON:0005423!1.15e-11!605;UBERON:0000923!2.02e-11!604;UBERON:0005291!2.02e-11!604;UBERON:0006598!2.02e-11!604;UBERON:0002532!2.02e-11!604;UBERON:0000477!2.17e-10!286;UBERON:0004111!1.56e-09!241;UBERON:0000062!4.18e-09!511;UBERON:0000055!8.58e-07!69;UBERON:0001986!9.35e-07!18;UBERON:0004638!9.35e-07!18;UBERON:0004852!9.35e-07!18 | |ontology_enrichment_uberon=UBERON:0000468!8.86e-16!659;UBERON:0000480!2.00e-14!626;UBERON:0000467!2.27e-14!625;UBERON:0000922!8.92e-14!612;UBERON:0002050!1.15e-11!605;UBERON:0005423!1.15e-11!605;UBERON:0000923!2.02e-11!604;UBERON:0005291!2.02e-11!604;UBERON:0006598!2.02e-11!604;UBERON:0002532!2.02e-11!604;UBERON:0000477!2.17e-10!286;UBERON:0004111!1.56e-09!241;UBERON:0000062!4.18e-09!511;UBERON:0000055!8.58e-07!69;UBERON:0001986!9.35e-07!18;UBERON:0004638!9.35e-07!18;UBERON:0004852!9.35e-07!18 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,2.75e-07,36;UBERON:0000166,5.41e-07,22;UBERON:0004638,8.38e-07,18;UBERON:0001986,8.38e-07,18;UBERON:0004852,8.38e-07,18 | |||
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| ||
|short_description=p@chr12:6344660..6344678,+ | |short_description=p@chr12:6344660..6344678,+ | ||
}} | }} |
Latest revision as of 11:11, 24 July 2015
Short description: | p@chr12:6344660..6344678, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6344660..6344678, + |
Coexpression cluster: | C3314_leiomyoma_Endothelial_Renal_Monocytederived_testicular_smallcell_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.47e-14 | 253 |
endothelial cell | 2.05e-09 | 36 |
endothelial cell of vascular tree | 2.73e-09 | 24 |
meso-epithelial cell | 3.94e-09 | 45 |
lining cell | 2.28e-08 | 58 |
barrier cell | 2.28e-08 | 58 |
blood vessel endothelial cell | 8.38e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.38e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
orifice | 2.75e-07 | 36 |
oral opening | 5.41e-07 | 22 |
blood vessel endothelium | 8.38e-07 | 18 |
endothelium | 8.38e-07 | 18 |
cardiovascular system endothelium | 8.38e-07 | 18 |