FFCP PHASE1:Hg19::chr12:91545551..91545568,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:91545551..91545568,- | |||
|coexpression_cluster_id=C540 | |||
|description=CAGE_peak_at_chr12:91545551..91545568,- | |description=CAGE_peak_at_chr12:91545551..91545568,- | ||
|id=chr12:91545551..91545568,- | |id=chr12:91545551..91545568,- | ||
|ontology_enrichment_celltype=CL:0000057!4.01e-22!75;CL:0000055!2.02e-13!180;CL:0002620!2.64e-09!23;CL:0000499!2.24e-07!27;CL:0002334!2.50e-07!12 | |ontology_enrichment_celltype=CL:0000057!4.01e-22!75;CL:0000055!2.02e-13!180;CL:0002620!2.64e-09!23;CL:0000499!2.24e-07!27;CL:0002334!2.50e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000499;5.89e-11;28!CL:0000153;4.78e-09;9!CL:0000447;4.78e-09;9!CL:0000135;2.44e-08;3!CL:0000388;2.44e-08;3!CL:0000136;1.86e-07;13!CL:0002615;2.10e-07;3!CL:0002622;2.78e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,6.80e-11,28;CL:0000136,3.00e-10,15;CL:0000057,2.99e-09,76;CL:0000153,4.04e-09,9;CL:0000447,4.04e-09,9;CL:0000135,2.46e-08,3;CL:0000388,2.46e-08,3;CL:0002615,1.58e-07,3;CL:0002622,4.89e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.62e-11!95;UBERON:0007023!1.01e-08!115;UBERON:0007100!1.05e-07!27;UBERON:0000468!4.06e-07!659;UBERON:0000948!4.39e-07!24;UBERON:0005498!4.39e-07!24;UBERON:0004140!4.39e-07!24;UBERON:0009881!4.39e-07!24;UBERON:0004141!4.39e-07!24;UBERON:0003084!4.39e-07!24;UBERON:0007005!4.39e-07!24;UBERON:0004139!4.39e-07!24;UBERON:0004291!4.39e-07!24;UBERON:0000475!8.76e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.93e-11;9!UBERON:0000042;3.93e-11;9!UBERON:0003688;1.38e-08;6!UBERON:0002358;1.38e-08;6!UBERON:0003684;1.38e-08;6!UBERON:0001178;1.38e-08;6!UBERON:0007846;2.44e-08;3!UBERON:0000043;2.44e-08;3!UBERON:0007845;2.44e-08;3!UBERON:0006947;2.84e-07;3!UBERON:0004054;2.84e-07;3!UBERON:0004151;9.22e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.27e-08,6;UBERON:0002358,1.27e-08,6;UBERON:0003684,1.27e-08,6;UBERON:0001178,1.27e-08,6;UBERON:0007846,2.46e-08,3;UBERON:0000043,2.46e-08,3;UBERON:0007845,2.46e-08,3;UBERON:0004457,4.62e-08,12;UBERON:0000042,4.62e-08,12;UBERON:0006947,2.09e-07,3;UBERON:0004054,2.09e-07,3;UBERON:0004151,5.66e-07,3 | |||
|phase1_expression=2.18014055124668,7.70761886007539,1.83240725324762,6.00439790118782,5.81049422755474,4.36169262050184,0,0.631719873426831,1.04474251279935,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,4.3372698286148,3.50936537445123,8.69079113764942,0.795285947051099,2.91980922181582,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,2.0078563452417,0.709336764396714,2.24271040056923,0,0.49333509683432,0.311211035399766,1.61652806483626,2.28846664358842,0.302714855289863,3.45705554687999,0.234321431833797,0.312160076830321,0,1.19558944441441,0.23486899728753,0.161872944368132,0,0,0,0.516628905878827,2.37600571456411,3.4617370098998,0,0.718618141816238,0.505008341862199,0.125118519871964,0.277064115484183,0.877955241761676,2.75839016219118,0.600952235626387,0.680593098960126,0.538168907066586,0.427114777637135,1.05965950579781,0.300091096084402,0.92747276314595,1.8034837803194,0.744467425326359,0.337552664482532,0.194874010322397,0.757301322732344,2.02509777013059,1.93975268182574,2.13005755509969,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,3.71494342425583,3.60939740834793,0,0.168584690078102,0,0.55146986366197,0,0,0.134831308160164,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0,1.00084595560703,1.08524321078289,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,2.17171960001369,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.50051156317903,0.271265023699736,0.623912584592421,3.7470087647404,0.630809660135739,0.585707074963566,0.300946099727719,0,2.0694614258501,0,0,1.30325421702124,0,0.686286847621712,0,0,0,0,0,0,1.48864684691266,0.460385919864187,4.77122160536225,0.256278298511402,1.02341449813341,1.60853921143608,2.96836132889982,0.154209693802656,0.355123450626254,0,1.55776328755086,0.697262270759755,0,0,0,2.06666006696292,2.00300284807389,3.54035920390445,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0.460511024178389,1.24052915236078,0.751941714077915,0.725083469571143,0.170453254832202,0,0,0,0,0,0.464845549297286,2.20368642781448,0,0.924100740528266,0,0,0,0,1.116475108079,0,1.33441135746677,0,2.1396949401696,0,0,0.899362287916574,3.84351841630477,0.824686816419805,0,0,0,0,0.243713489631284,0,0.272999822815972,2.54529777516683,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.294747123039363,0,0,5.69990615303693,14.8182701831956,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,1.39473591775749,0.276283915531148,0,0,0,1.24415835064723,0,0,0,0.789147245095469,0,1.11136990144637,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.384751292518985,0.227884111694002,0,0,0,2.87101043758728,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,1.97292201424695,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,5.94070672022902,0,0,0,0,0.969890164884194,0,2.25980740780532,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37847203816763,0.687481272035051,2.87149209830726,0,0.429226048136571,2.90122894674434,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,2.1440859791201,1.98627591109629,0.25426853765475,0.542999601753713,0,0.979762080328227,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0,0,0,0.747511887973863,0.78602152549833,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.74627401443437,0.934853239388898,0,1.13641803165053,1.50940741051545,2.66943366478961,0.228840068396924,1.36107831386915,0.466311601748341,1.18284119991707,0.159296767163702,0.899606224327209,0,0.829412415681711,0.265841714557995,0,0.901545653983311,0,0,0,0.107410557042488,0.464033759878494,0,0,3.09056134664514,1.6837474438296,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,2.1160556621441,14.0872919582472,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.902523940191087,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,6.45074531906083,0,0,0,0.336283722218824,0,0,0.443511850813194,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,1.03608082081518,0.51215543128185,0,0.430227358820278,0,0,3.38709640152743,0,0,0,0,0,0,0,0.205325613712494,0,3.88568794447312,0,0,0.237840181555137,0,0,0,0.154348316215889,1.09279780251979,0,1.96118657403124,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0.730336388246517,3.21110498383179,0,0,0.0679914901909147,0,2.1161073620616,17.1117708356706,19.873552031151,16.0071827985802,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0.103432995861895,2.13233981900981,0.952257725854961,0.0645889098360061,0.0620747142958579,0,0.509177266225319,0.202117188958219,3.26575121845442,2.39563310759697,0,0.430333232356058,3.99192427855216,0,0,0,0,0,0.733448665097199,0.813792356631477,1.99727032255654,1.00636896795513,0 | |phase1_expression=2.18014055124668,7.70761886007539,1.83240725324762,6.00439790118782,5.81049422755474,4.36169262050184,0,0.631719873426831,1.04474251279935,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,4.3372698286148,3.50936537445123,8.69079113764942,0.795285947051099,2.91980922181582,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,2.0078563452417,0.709336764396714,2.24271040056923,0,0.49333509683432,0.311211035399766,1.61652806483626,2.28846664358842,0.302714855289863,3.45705554687999,0.234321431833797,0.312160076830321,0,1.19558944441441,0.23486899728753,0.161872944368132,0,0,0,0.516628905878827,2.37600571456411,3.4617370098998,0,0.718618141816238,0.505008341862199,0.125118519871964,0.277064115484183,0.877955241761676,2.75839016219118,0.600952235626387,0.680593098960126,0.538168907066586,0.427114777637135,1.05965950579781,0.300091096084402,0.92747276314595,1.8034837803194,0.744467425326359,0.337552664482532,0.194874010322397,0.757301322732344,2.02509777013059,1.93975268182574,2.13005755509969,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,3.71494342425583,3.60939740834793,0,0.168584690078102,0,0.55146986366197,0,0,0.134831308160164,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0,1.00084595560703,1.08524321078289,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,2.17171960001369,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.50051156317903,0.271265023699736,0.623912584592421,3.7470087647404,0.630809660135739,0.585707074963566,0.300946099727719,0,2.0694614258501,0,0,1.30325421702124,0,0.686286847621712,0,0,0,0,0,0,1.48864684691266,0.460385919864187,4.77122160536225,0.256278298511402,1.02341449813341,1.60853921143608,2.96836132889982,0.154209693802656,0.355123450626254,0,1.55776328755086,0.697262270759755,0,0,0,2.06666006696292,2.00300284807389,3.54035920390445,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0.460511024178389,1.24052915236078,0.751941714077915,0.725083469571143,0.170453254832202,0,0,0,0,0,0.464845549297286,2.20368642781448,0,0.924100740528266,0,0,0,0,1.116475108079,0,1.33441135746677,0,2.1396949401696,0,0,0.899362287916574,3.84351841630477,0.824686816419805,0,0,0,0,0.243713489631284,0,0.272999822815972,2.54529777516683,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.294747123039363,0,0,5.69990615303693,14.8182701831956,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,1.39473591775749,0.276283915531148,0,0,0,1.24415835064723,0,0,0,0.789147245095469,0,1.11136990144637,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.384751292518985,0.227884111694002,0,0,0,2.87101043758728,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,1.97292201424695,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,5.94070672022902,0,0,0,0,0.969890164884194,0,2.25980740780532,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37847203816763,0.687481272035051,2.87149209830726,0,0.429226048136571,2.90122894674434,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,2.1440859791201,1.98627591109629,0.25426853765475,0.542999601753713,0,0.979762080328227,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0,0,0,0.747511887973863,0.78602152549833,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.74627401443437,0.934853239388898,0,1.13641803165053,1.50940741051545,2.66943366478961,0.228840068396924,1.36107831386915,0.466311601748341,1.18284119991707,0.159296767163702,0.899606224327209,0,0.829412415681711,0.265841714557995,0,0.901545653983311,0,0,0,0.107410557042488,0.464033759878494,0,0,3.09056134664514,1.6837474438296,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,2.1160556621441,14.0872919582472,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.902523940191087,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,6.45074531906083,0,0,0,0.336283722218824,0,0,0.443511850813194,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,1.03608082081518,0.51215543128185,0,0.430227358820278,0,0,3.38709640152743,0,0,0,0,0,0,0,0.205325613712494,0,3.88568794447312,0,0,0.237840181555137,0,0,0,0.154348316215889,1.09279780251979,0,1.96118657403124,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0.730336388246517,3.21110498383179,0,0,0.0679914901909147,0,2.1161073620616,17.1117708356706,19.873552031151,16.0071827985802,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0.103432995861895,2.13233981900981,0.952257725854961,0.0645889098360061,0.0620747142958579,0,0.509177266225319,0.202117188958219,3.26575121845442,2.39563310759697,0,0.430333232356058,3.99192427855216,0,0,0,0,0,0.733448665097199,0.813792356631477,1.99727032255654,1.00636896795513,0 | ||
|short_description=p@chr12:91545551..91545568,- | |short_description=p@chr12:91545551..91545568,- | ||
}} | }} |
Latest revision as of 13:28, 24 July 2015
Short description: | p@chr12:91545551..91545568, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:91545551..91545568, - |
Coexpression cluster: | C540_tenocyte_Chondrocyte_Adipocyte_normal_Synoviocyte_Fibroblast_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 6.80e-11 | 28 |
fat cell | 3.00e-10 | 15 |
fibroblast | 2.99e-09 | 76 |
GAG secreting cell | 4.04e-09 | 9 |
carbohydrate secreting cell | 4.04e-09 | 9 |
fibrocyte | 2.46e-08 | 3 |
tendon cell | 2.46e-08 | 3 |
adipocyte of omentum tissue | 1.58e-07 | 3 |
prostate stromal cell | 4.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.27e-08 | 6 |
peritoneum | 1.27e-08 | 6 |
abdominal cavity | 1.27e-08 | 6 |
visceral peritoneum | 1.27e-08 | 6 |
dense regular connective tissue | 2.46e-08 | 3 |
tendon | 2.46e-08 | 3 |
regular connective tissue | 2.46e-08 | 3 |
cavity lining | 4.62e-08 | 12 |
serous membrane | 4.62e-08 | 12 |
male genital duct | 2.09e-07 | 3 |
internal male genitalia | 2.09e-07 | 3 |
cardiac chamber | 5.66e-07 | 3 |