FFCP PHASE1:Hg19::chr13:21872328..21872341,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_uc001uny.2,uc001unz.1_5end | |association_with_transcript=16bp_to_uc001uny.2,uc001unz.1_5end | ||
|cluster_id=chr13:21872328..21872341,+ | |||
|description=CAGE_peak_2_at_uc001uny.2_5end,CAGE_peak_2_at_uc001unz.1_5end | |description=CAGE_peak_2_at_uc001uny.2_5end,CAGE_peak_2_at_uc001unz.1_5end | ||
|id=chr13:21872328..21872341,+ | |id=chr13:21872328..21872341,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;2.88e-09;1!CL:0000557;2.88e-09;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.16e-09;1 | |||
|ontology_enrichment_disease=DOID:0050687!4.45e-13!143;DOID:305!5.08e-12!106;DOID:162!1.13e-11!235;DOID:14566!5.38e-11!239 | |ontology_enrichment_disease=DOID:0050687!4.45e-13!143;DOID:305!5.08e-12!106;DOID:162!1.13e-11!235;DOID:14566!5.38e-11!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.32e-09;14!DOID:2355;2.88e-09;1!DOID:171;4.45e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.99e-09,1;DOID:1749,3.02e-09,14;DOID:171,4.51e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.26e-09!82;UBERON:0005743!1.67e-09!86;UBERON:0000073!2.10e-08!94;UBERON:0001016!2.10e-08!94;UBERON:0000955!2.63e-07!69;UBERON:0006238!2.63e-07!69;UBERON:0007023!4.74e-07!115;UBERON:0001049!8.66e-07!57;UBERON:0005068!8.66e-07!57;UBERON:0006241!8.66e-07!57;UBERON:0007135!8.66e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.71e-09;4!UBERON:0000923;2.71e-09;4!UBERON:0010316;2.71e-09;4!UBERON:0005291;2.71e-09;4!UBERON:0002050;1.34e-07;5!UBERON:0005423;1.34e-07;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0,0,0,0.149448680551801,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.860413786167011,0.365921118388786,0.265059536642971,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0.784885860501384,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.737930631258681,0.171567810298526,0.329250856225877,0,0.502644862058154,0,0,0,0,0,0,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0.503946384596579,0,0,0,0,1.97065295158377,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.431255149719035,0,0,2.60279707715243,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0.303127571446259,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0.604297247958111,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0,1.56869953835371,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0,0,0.650756789328606,0.103041011647722,0,0.247528499761764,0,1.30012049207304,0,0,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.495854746082934,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.213425530045242,0.478278818186467,0,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0.935702702041099,0,0,0,0,0.47748896947538,0,0.307160702099232,0.994147647766298,0.422008249231538,0,0,2.53350489753592,0.398495976502139,0,0.755798243562828,0.409074730008619,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0.262379999988587,0,0.568967241427498,0.254253650292766,0.236387681767936,0.689486746482929,1.16641845353302,0.173624994933292,0,0.241192877250816,0,0.331737779793674,0.295547618953547,0.219385397153973,0.871507708151921,0.41827123283581,0.230850775511391,0,0,0.179515288819544,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0.816164040795739,0,0.649165919226273,0.995261931078505,0.176915129006678,0,0,0,0.104421949505455,0.134802265961354,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0.394584402849391,0,0.30607276163049,0.063186579628488,1.35291077473043,0.414752765588989,0,0,0,0,0,0.277349346026277,0.694238953340524,0.293977192243133,0,0.873633341210151,0,0.0967563312890851,0.65780385377567,0.328461828212837,0.581934098930517,0.882561266915003,0.225980740780532,0,0.19871461170299,0.253243183823515,0.586654148204409,0,0.426905989478705,0.39961921916426,0.288180834308212,0.343609788497747,0.514784993585894,0.288109595976299,0.124252535565433,0.235694034616795,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0.821432273351958,1.27746588066972,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0.0984274815147488,1.43944664511834,0,0,0.482259445395058,0.412618309791701,0.83088067605837,0.449947783103001,0,0.121499113316049,0,0.472834243795189,0.786818822024972,0.211200673038813,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0.775697738169303,0.13223260174269,0,0,0.106787412567695,1.25763444079733,0,0,0.592834895693833,0.365377795142688,1.27668251554036,0,0,0,0,0.314108192500469,0,0.366078794705889,0.500763722825999,1.14681839138014,0.887432412294818,0.310482014706917,0.138348634936231,0.124980407962107,0.151649117541648,0.570930667089935,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0.295710299979268,0.159296767163702,0.449803112163605,0.621051827505038,0,0,0,0,0,0,0.181848659202559,0.214821114084977,1.39210127963548,0,0,0.686791410365586,0,0,0,0,0,0.453411851024545,0,0.244736704506468,0.358177682162975,0,0,0,0.38582807654183,0.168942440653073,0.256241518587947,0,0.303859956177382,0.414775308455192,0.389720617678777,0,0.327130788511688,0.327609848846413,0.245772908753719,0,0,0,0.172214979660816,0,0,0.559518030877778,0,0,0,8.33509491836251,0.109209638192014,0.509197589862076,3.18862380152524,2.47871528518004,0,0,0.157723490002507,0,0,0,0.385375350578757,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,1.07962490351128,0.353909170043221,0.733714394086716,0.462102664601353,0,0.690359926060101,0,0.225630985047772,0,0,0,0,0.147856086217045,0.337687923091973,0,0.206686796501184,0.19024743058172,1.09394961803644,0,0.496211178389294,0.703484977438482,0.383287282918786,0,0.336283722218824,0.606965604236632,0.682986574053893,0.887023701626388,0.115233987555779,0.171488009437418,0.203909198930495,0.131545547125698,0.118193840883968,0.111231401892069,0.156986185701028,0.314231179832004,0.560544326627578,0,0,0.47775168788705,0.142953088353313,0.316027223465453,0.116241425368125,0.521574816907738,0,0,0.3414369541879,0.691259661814092,0,0,0.170426809518315,0.423387050190929,1.8328549483524,0.31020638566432,0,0.335566295393377,0.490751168076215,0.365753774946808,0,0,0,0,0,0.596852325484105,0,0.22589216407792,0.109940516745429,1.50962843566674,0.154348316215889,0.218559560503957,13.1688842981226,0.490296643507811,0,0.196308467114945,0.891139200981258,0,0.169927114687817,0,0.257831551894309,0.0999411559249289,0,1.05868461514708,0.882655033580851,0.730336388246517,0,0.860037498908708,0.473314686579554,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.218531143927391,0.126698501011437,0.101988829741982,0,0.275684698604535,0.250707539292375,0.378893491091197,0.535928260312357,0.829169439458779,0.20686599172379,0.426467963801962,0.23806443146374,0.0645889098360061,0.31037357147929,0,0.381882949668989,0.202117188958219,0.653150243690884,0,0.5388164241167,1.00411087549747,0.665320713092027,0.407016343054873,0.213454691755431,0,0.0898252021065869,2.34640942403454,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0,0,0,0.149448680551801,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.860413786167011,0.365921118388786,0.265059536642971,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0.784885860501384,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.737930631258681,0.171567810298526,0.329250856225877,0,0.502644862058154,0,0,0,0,0,0,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0.503946384596579,0,0,0,0,1.97065295158377,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.431255149719035,0,0,2.60279707715243,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0.303127571446259,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0.604297247958111,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0,1.56869953835371,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0,0,0.650756789328606,0.103041011647722,0,0.247528499761764,0,1.30012049207304,0,0,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.495854746082934,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.213425530045242,0.478278818186467,0,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0.935702702041099,0,0,0,0,0.47748896947538,0,0.307160702099232,0.994147647766298,0.422008249231538,0,0,2.53350489753592,0.398495976502139,0,0.755798243562828,0.409074730008619,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0.262379999988587,0,0.568967241427498,0.254253650292766,0.236387681767936,0.689486746482929,1.16641845353302,0.173624994933292,0,0.241192877250816,0,0.331737779793674,0.295547618953547,0.219385397153973,0.871507708151921,0.41827123283581,0.230850775511391,0,0,0.179515288819544,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0.816164040795739,0,0.649165919226273,0.995261931078505,0.176915129006678,0,0,0,0.104421949505455,0.134802265961354,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0.394584402849391,0,0.30607276163049,0.063186579628488,1.35291077473043,0.414752765588989,0,0,0,0,0,0.277349346026277,0.694238953340524,0.293977192243133,0,0.873633341210151,0,0.0967563312890851,0.65780385377567,0.328461828212837,0.581934098930517,0.882561266915003,0.225980740780532,0,0.19871461170299,0.253243183823515,0.586654148204409,0,0.426905989478705,0.39961921916426,0.288180834308212,0.343609788497747,0.514784993585894,0.288109595976299,0.124252535565433,0.235694034616795,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0.821432273351958,1.27746588066972,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0.0984274815147488,1.43944664511834,0,0,0.482259445395058,0.412618309791701,0.83088067605837,0.449947783103001,0,0.121499113316049,0,0.472834243795189,0.786818822024972,0.211200673038813,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0.775697738169303,0.13223260174269,0,0,0.106787412567695,1.25763444079733,0,0,0.592834895693833,0.365377795142688,1.27668251554036,0,0,0,0,0.314108192500469,0,0.366078794705889,0.500763722825999,1.14681839138014,0.887432412294818,0.310482014706917,0.138348634936231,0.124980407962107,0.151649117541648,0.570930667089935,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0.295710299979268,0.159296767163702,0.449803112163605,0.621051827505038,0,0,0,0,0,0,0.181848659202559,0.214821114084977,1.39210127963548,0,0,0.686791410365586,0,0,0,0,0,0.453411851024545,0,0.244736704506468,0.358177682162975,0,0,0,0.38582807654183,0.168942440653073,0.256241518587947,0,0.303859956177382,0.414775308455192,0.389720617678777,0,0.327130788511688,0.327609848846413,0.245772908753719,0,0,0,0.172214979660816,0,0,0.559518030877778,0,0,0,8.33509491836251,0.109209638192014,0.509197589862076,3.18862380152524,2.47871528518004,0,0,0.157723490002507,0,0,0,0.385375350578757,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,1.07962490351128,0.353909170043221,0.733714394086716,0.462102664601353,0,0.690359926060101,0,0.225630985047772,0,0,0,0,0.147856086217045,0.337687923091973,0,0.206686796501184,0.19024743058172,1.09394961803644,0,0.496211178389294,0.703484977438482,0.383287282918786,0,0.336283722218824,0.606965604236632,0.682986574053893,0.887023701626388,0.115233987555779,0.171488009437418,0.203909198930495,0.131545547125698,0.118193840883968,0.111231401892069,0.156986185701028,0.314231179832004,0.560544326627578,0,0,0.47775168788705,0.142953088353313,0.316027223465453,0.116241425368125,0.521574816907738,0,0,0.3414369541879,0.691259661814092,0,0,0.170426809518315,0.423387050190929,1.8328549483524,0.31020638566432,0,0.335566295393377,0.490751168076215,0.365753774946808,0,0,0,0,0,0.596852325484105,0,0.22589216407792,0.109940516745429,1.50962843566674,0.154348316215889,0.218559560503957,13.1688842981226,0.490296643507811,0,0.196308467114945,0.891139200981258,0,0.169927114687817,0,0.257831551894309,0.0999411559249289,0,1.05868461514708,0.882655033580851,0.730336388246517,0,0.860037498908708,0.473314686579554,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.218531143927391,0.126698501011437,0.101988829741982,0,0.275684698604535,0.250707539292375,0.378893491091197,0.535928260312357,0.829169439458779,0.20686599172379,0.426467963801962,0.23806443146374,0.0645889098360061,0.31037357147929,0,0.381882949668989,0.202117188958219,0.653150243690884,0,0.5388164241167,1.00411087549747,0.665320713092027,0.407016343054873,0.213454691755431,0,0.0898252021065869,2.34640942403454,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p2@uc001uny.2,p2@uc001unz.1 | |short_description=p2@uc001uny.2,p2@uc001unz.1 | ||
}} | }} |
Latest revision as of 15:03, 24 July 2015
Short description: | p2@uc001uny.2, p2@uc001unz.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001uny.2_5end, CAGE_peak_2_at_uc001unz.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_uc001uny.2, uc001unz.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anemia | 1.99e-09 | 1 |
squamous cell carcinoma | 3.02e-09 | 14 |
neuroectodermal tumor | 4.51e-08 | 10 |