FFCP PHASE1:Hg19::chr13:28715620..28715624,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:28715620..28715624,+ to FFCP PHASE1:Hg19::chr13:28715620..28715624,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:28715620..28715624,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr13:28715620..28715624,+ | |||
|id=chr13:28715620..28715624,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.86e-13!172;CL:0000566!3.86e-13!172;CL:0000988!1.72e-11!182;CL:0002032!4.16e-11!165;CL:0000837!4.16e-11!165;CL:0000738!1.57e-10!140;CL:0002087!3.10e-08!119;CL:0002031!4.44e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.49e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.15e-08,3;CL:0000825,1.15e-08,3;CL:0000037,2.62e-07,168;CL:0000047,4.47e-07,8;CL:0002032,8.42e-07,161;CL:0000837,8.42e-07,161;CL:0000988,9.36e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.49e-08;3!UBERON:0001045;4.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.63e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.97e-07;1!UBERON:0002134;4.97e-07;1!UBERON:0001153;4.97e-07;1!UBERON:0009854;4.97e-07;1!UBERON:0005208;4.97e-07;1!UBERON:0004145;4.97e-07;1!UBERON:0005946;4.97e-07;1!UBERON:0005965;4.97e-07;1!UBERON:0002078;4.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.40e-07,1;UBERON:0005208,3.40e-07,1;UBERON:0005946,3.40e-07,1;UBERON:0005965,3.40e-07,1;UBERON:0002078,3.40e-07,1;UBERON:0001154,4.31e-07,1;UBERON:0001153,4.31e-07,1;UBERON:0001045,4.31e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.738905305049512,0.314843125254717,0,0.383829398097213,0.309632246632152,0,0,0,0.154934401160603,0.426507697462265,0.880801318004542,1.66198622559563,1.40381113229099,0.868043482863407,0.895661896959697,0,0.257575567634187,1.01778767145695,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0.575384784644301,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0.75374599577023,0,0,0,0.368277635987565,0,0,0,0.838634582033504,0.22465726229299,0.300353785683013,0.16072558669708,0.570025487482497,0.19891667719909,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,1.70763890732835,0.587237189370939,0.764546456250458,0,0,1.05353633910031,2.16380747125216,1.17903228824749,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0.541607727530031,0.384273959177026,0.130059347559878,0.657751618414705,0.276350017785848,0,0.444859689486181,0.802622484269139,0,0,0,1.03088233644789,0,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,2.40696176205157,2.17236605824198,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.472674085820339,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0.238490624305342,0,0.74291500265913,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0,0,0.23486899728753,0.485618833104395,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0.505008341862199,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0.506328996723799,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0.818238361772504,0,0.121973706129595,0.265059536642971,0.348581828608555,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0.882926198829301,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,1.37921532141349,0.431255149719035,1.41177339907723,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,11.966458368161,0.414415513436035,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,1.07857100409308,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.348631135379878,0,0,0.184161977871793,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.412164046590889,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0.459446800413919,0,0.764637207142375,1.13929437434833,1.19115887728894,0.411362273086194,0,0,1.58625035258854,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,1.2700414963433,0,1.40398589056729,0.912938716132769,0.313359791546046,2.50634477090067,0.338583555603207,1.1241165257259,0.605399121573143,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0.63337622438398,0.398495976502139,1.38141957765574,0.251932747854276,0.102268682502155,0.246169610922139,0,0.179736702294654,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.455173793141999,0.254253650292766,0.236387681767936,0,0.583209226766509,0,0,0.241192877250816,1.52581736317083,1.99042667876204,0.886642856860642,0,0,0,0.153900517007594,0,0.23056390438806,0,0.325942115766024,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0.332423363800313,0.225595660617181,0.19606253431774,0.167821586975843,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0.707660516026713,0,0,0.370691816839509,0.104421949505455,0.202203398942031,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0.394584402849391,1.20990716048664,0.61214552326098,0,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0.387025325156341,0,0.246346371159628,0,0.0882561266915003,0,0,0,0.253243183823515,0,0.160317640503067,0,0.19980960958213,0.144090417154106,0,0.171594997861965,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0,0.288950589901519,0,0.684526894459965,0,0,0.525774708558629,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0.26961417541674,0,0.0846733320657845,0,0.272406812223151,0.321506296930038,1.37539436597234,2.07720169014593,0.2249738915515,0,0.242998226632099,0,0.315222829196793,0.104909176269996,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0.246277562248017,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0.66116300871345,0,0,0.320362237703084,0.314408610199332,0,0,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0,0,0,0.886068179966986,0,0.625954653532499,0,0.554645257684261,0.18628920882415,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0.553033744606923,1.16916185303633,0,0.327130788511688,0.655219697692825,0,0,0,0.213383459388282,0,0,0.184105950251841,0,0,0,0.215649622793364,0.157265941855896,0.109209638192014,0,0,0.619678821295011,0,0,2.60243758504136,0,0,0,0.321146125482298,0,0.478901577171454,0.41023272848151,0.756215088665154,0,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0.781514011233092,0.785720083444267,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0.535701835878287,1.00885116665647,0.606965604236632,0.227662191351298,0.0887023701626388,0.230467975111559,0.171488009437418,0.0679697329768317,0.131545547125698,0.118193840883968,0,0.078493092850514,0.785577949580009,0,0,0,0.9555033757741,0.142953088353313,0.47404083519818,0.116241425368125,0.347716544605159,0,0.207216164163037,0,0,0,0.118332000730565,0,0.423387050190929,0,0.31020638566432,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0.356760272332706,0,0.219881033490858,0.301925687133347,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0.599646935549574,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0.135982980381829,0.872701380680755,0,0,0.462175628631418,0,0,0.327796715891087,0.506794004045748,0.203977659483963,0.26721740526556,0.551369397209069,0,0.303114792872958,1.07185652062471,0,0.724030971033267,0.213233981900981,0,0.258355639344024,0.31037357147929,0,0.25458863311266,0.606351566874658,0,0,0.336760265072938,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0.366724332548599,0,0,0.402547587182052,0.320568492303233 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.738905305049512,0.314843125254717,0,0.383829398097213,0.309632246632152,0,0,0,0.154934401160603,0.426507697462265,0.880801318004542,1.66198622559563,1.40381113229099,0.868043482863407,0.895661896959697,0,0.257575567634187,1.01778767145695,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0.575384784644301,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0.75374599577023,0,0,0,0.368277635987565,0,0,0,0.838634582033504,0.22465726229299,0.300353785683013,0.16072558669708,0.570025487482497,0.19891667719909,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,1.70763890732835,0.587237189370939,0.764546456250458,0,0,1.05353633910031,2.16380747125216,1.17903228824749,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0.541607727530031,0.384273959177026,0.130059347559878,0.657751618414705,0.276350017785848,0,0.444859689486181,0.802622484269139,0,0,0,1.03088233644789,0,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,2.40696176205157,2.17236605824198,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.472674085820339,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0.238490624305342,0,0.74291500265913,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0,0,0.23486899728753,0.485618833104395,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0.505008341862199,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0.506328996723799,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0.818238361772504,0,0.121973706129595,0.265059536642971,0.348581828608555,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0.882926198829301,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,1.37921532141349,0.431255149719035,1.41177339907723,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,11.966458368161,0.414415513436035,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,1.07857100409308,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.348631135379878,0,0,0.184161977871793,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.412164046590889,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0.459446800413919,0,0.764637207142375,1.13929437434833,1.19115887728894,0.411362273086194,0,0,1.58625035258854,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,1.2700414963433,0,1.40398589056729,0.912938716132769,0.313359791546046,2.50634477090067,0.338583555603207,1.1241165257259,0.605399121573143,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0.63337622438398,0.398495976502139,1.38141957765574,0.251932747854276,0.102268682502155,0.246169610922139,0,0.179736702294654,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.455173793141999,0.254253650292766,0.236387681767936,0,0.583209226766509,0,0,0.241192877250816,1.52581736317083,1.99042667876204,0.886642856860642,0,0,0,0.153900517007594,0,0.23056390438806,0,0.325942115766024,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0.332423363800313,0.225595660617181,0.19606253431774,0.167821586975843,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0.707660516026713,0,0,0.370691816839509,0.104421949505455,0.202203398942031,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0.394584402849391,1.20990716048664,0.61214552326098,0,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0.387025325156341,0,0.246346371159628,0,0.0882561266915003,0,0,0,0.253243183823515,0,0.160317640503067,0,0.19980960958213,0.144090417154106,0,0.171594997861965,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0,0.288950589901519,0,0.684526894459965,0,0,0.525774708558629,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0.26961417541674,0,0.0846733320657845,0,0.272406812223151,0.321506296930038,1.37539436597234,2.07720169014593,0.2249738915515,0,0.242998226632099,0,0.315222829196793,0.104909176269996,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0.246277562248017,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0.66116300871345,0,0,0.320362237703084,0.314408610199332,0,0,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0,0,0,0.886068179966986,0,0.625954653532499,0,0.554645257684261,0.18628920882415,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0.553033744606923,1.16916185303633,0,0.327130788511688,0.655219697692825,0,0,0,0.213383459388282,0,0,0.184105950251841,0,0,0,0.215649622793364,0.157265941855896,0.109209638192014,0,0,0.619678821295011,0,0,2.60243758504136,0,0,0,0.321146125482298,0,0.478901577171454,0.41023272848151,0.756215088665154,0,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0.781514011233092,0.785720083444267,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0.535701835878287,1.00885116665647,0.606965604236632,0.227662191351298,0.0887023701626388,0.230467975111559,0.171488009437418,0.0679697329768317,0.131545547125698,0.118193840883968,0,0.078493092850514,0.785577949580009,0,0,0,0.9555033757741,0.142953088353313,0.47404083519818,0.116241425368125,0.347716544605159,0,0.207216164163037,0,0,0,0.118332000730565,0,0.423387050190929,0,0.31020638566432,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0.356760272332706,0,0.219881033490858,0.301925687133347,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0.599646935549574,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0.135982980381829,0.872701380680755,0,0,0.462175628631418,0,0,0.327796715891087,0.506794004045748,0.203977659483963,0.26721740526556,0.551369397209069,0,0.303114792872958,1.07185652062471,0,0.724030971033267,0.213233981900981,0,0.258355639344024,0.31037357147929,0,0.25458863311266,0.606351566874658,0,0,0.336760265072938,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0.366724332548599,0,0,0.402547587182052,0.320568492303233 | ||
|short_description=p@chr13:28715620..28715624,+ | |||
}} | }} |
Latest revision as of 15:23, 24 July 2015
Short description: | p@chr13:28715620..28715624, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:28715620..28715624, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.15e-08 | 3 |
pro-NK cell | 1.15e-08 | 3 |
hematopoietic stem cell | 2.62e-07 | 168 |
neuronal stem cell | 4.47e-07 | 8 |
hematopoietic oligopotent progenitor cell | 8.42e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.42e-07 | 161 |
hematopoietic cell | 9.36e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 3.40e-07 | 1 |
right atrium valve | 3.40e-07 | 1 |
outflow tract of atrium | 3.40e-07 | 1 |
outflow part of right atrium | 3.40e-07 | 1 |
right cardiac atrium | 3.40e-07 | 1 |
vermiform appendix | 4.31e-07 | 1 |
caecum | 4.31e-07 | 1 |
midgut | 4.31e-07 | 1 |