FFCP PHASE1:Hg19::chr13:78146259..78146282,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:78146259..78146282,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr13:78146259..78146282,+ | |description=CAGE_peak_at_chr13:78146259..78146282,+ | ||
|id=chr13:78146259..78146282,+ | |id=chr13:78146259..78146282,+ | ||
|ontology_enrichment_celltype=CL:0002537;2.42e-15;5!CL:0002231;2.97e-07;3 | |ontology_enrichment_celltype=CL:1000415!1.01e-08!2;CL:0002537!2.36e-08!5;CL:0002076!1.90e-07!43 | ||
| | |ontology_enrichment_celltype_v019=CL:0002537;2.42e-15;5!CL:0002231;2.97e-07;3 | ||
|ontology_enrichment_disease=DOID:4468;2.99e-10;2 | |ontology_enrichment_celltype_v019_2=CL:0002537,2.17e-15,5;CL:0002231,2.97e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0002171;1.42e-19;1!UBERON:0006518;1.42e-19;1!UBERON:0008949;1.42e-19;1!UBERON:0000101;1.42e-19;1!UBERON:0002167;1.42e-19;1!UBERON:0000305;3.06e-11;7!UBERON:0000341;1.57e-10;2!UBERON:0005631;3.83e-08;10!UBERON:0000158;3.83e-08;10!UBERON:0001043;1.82e-07;3!UBERON:0001723;2.12e-07;3!UBERON:0001033;2.12e-07;3 | |ontology_enrichment_development_v019=UBERON:0009143;8.95e-20;1!UBERON:0008814;1.80e-10;2!UBERON:0010056;1.80e-10;2 | ||
|ontology_enrichment_disease=DOID:4468!1.35e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.99e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.49e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.24e-14!14;UBERON:0000158!5.24e-14!14;UBERON:0001723!1.75e-13!3;UBERON:0001033!1.75e-13!3;UBERON:0010056!1.75e-13!3;UBERON:0003124!7.96e-10!7;UBERON:0002294!4.00e-09!7;UBERON:0001173!4.00e-09!7;UBERON:0004912!4.00e-09!7;UBERON:0004119!6.31e-09!169;UBERON:0000925!6.31e-09!169;UBERON:0006595!6.31e-09!169;UBERON:0000077!8.94e-09!130;UBERON:0000166!1.23e-08!21;UBERON:0001004!4.99e-08!72;UBERON:0000161!6.85e-08!35;UBERON:0000478!9.62e-08!24;UBERON:0001007!2.55e-07!155;UBERON:0001555!2.55e-07!155;UBERON:0007026!2.55e-07!155;UBERON:0000065!3.34e-07!53;UBERON:0001042!8.43e-07!10;UBERON:0009145!8.43e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.42e-19;1!UBERON:0006518;1.42e-19;1!UBERON:0008949;1.42e-19;1!UBERON:0000101;1.42e-19;1!UBERON:0002167;1.42e-19;1!UBERON:0000305;3.06e-11;7!UBERON:0000341;1.57e-10;2!UBERON:0005631;3.83e-08;10!UBERON:0000158;3.83e-08;10!UBERON:0001043;1.82e-07;3!UBERON:0001723;2.12e-07;3!UBERON:0001033;2.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.30e-19,1;UBERON:0006518,1.30e-19,1;UBERON:0008949,1.30e-19,1;UBERON:0000101,1.30e-19,1;UBERON:0002167,1.30e-19,1;UBERON:0000305,2.83e-11,7;UBERON:0000341,1.57e-10,2;UBERON:0004871,5.54e-10,8;UBERON:0001043,1.82e-07,3;UBERON:0009143,1.82e-07,3;UBERON:0001723,2.19e-07,3;UBERON:0001033,2.19e-07,3;UBERON:0010056,2.19e-07,3 | |||
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| ||
|short_description=p@chr13:78146259..78146282,+ | |short_description=p@chr13:78146259..78146282,+ | ||
}} | }} |
Latest revision as of 17:14, 24 July 2015
Short description: | p@chr13:78146259..78146282, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:78146259..78146282, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.17e-15 | 5 |
epithelial cell of prostate | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.30e-19 | 1 |
right lung lobe | 1.30e-19 | 1 |
lower lobe of lung | 1.30e-19 | 1 |
lobe of lung | 1.30e-19 | 1 |
right lung | 1.30e-19 | 1 |
amnion | 2.83e-11 | 7 |
throat | 1.57e-10 | 2 |
somatic layer of lateral plate mesoderm | 5.54e-10 | 8 |
esophagus | 1.82e-07 | 3 |
esophageal region | 1.82e-07 | 3 |
tongue | 2.19e-07 | 3 |
gustatory system | 2.19e-07 | 3 |
future tongue | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.49e-10 | 2 |