FFCP PHASE1:Hg19::chr14:106321879..106321890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-160bp_to_AY671148,AY671772,AY671782,AY671783_5end | |association_with_transcript=-160bp_to_AY671148,AY671772,AY671782,AY671783_5end | ||
|cluster_id=chr14:106321879..106321890,+ | |||
|coexpression_cluster_id=C350 | |coexpression_cluster_id=C350 | ||
|description=CAGE_peak_2_at_AY671148_5end,CAGE_peak_2_at_AY671772_5end,CAGE_peak_2_at_AY671782_5end,CAGE_peak_2_at_AY671783_5end | |description=CAGE_peak_2_at_AY671148_5end,CAGE_peak_2_at_AY671772_5end,CAGE_peak_2_at_AY671782_5end,CAGE_peak_2_at_AY671783_5end | ||
|id=chr14:106321879..106321890,+ | |id=chr14:106321879..106321890,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.48e-55!24;CL:0000826!4.48e-55!24;CL:0000542!8.75e-26!53;CL:0000051!8.75e-26!53;CL:0000838!3.00e-23!52;CL:0000236!1.20e-21!14;CL:0002087!1.48e-11!119;CL:0000738!3.62e-09!140;CL:0000037!1.55e-07!172;CL:0000566!1.55e-07!172;CL:0002031!1.96e-07!124;CL:0000842!4.48e-07!3;CL:0000988!7.03e-07!182 | |ontology_enrichment_celltype=CL:0000945!4.48e-55!24;CL:0000826!4.48e-55!24;CL:0000542!8.75e-26!53;CL:0000051!8.75e-26!53;CL:0000838!3.00e-23!52;CL:0000236!1.20e-21!14;CL:0002087!1.48e-11!119;CL:0000738!3.62e-09!140;CL:0000037!1.55e-07!172;CL:0000566!1.55e-07!172;CL:0002031!1.96e-07!124;CL:0000842!4.48e-07!3;CL:0000988!7.03e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.68e-22;24!CL:0000542;1.03e-15;53!CL:0000236;3.94e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.72e-22,24;CL:0000826,1.72e-22,24;CL:0000542,5.00e-16,53;CL:0000051,5.00e-16,53;CL:0000838,1.01e-10,52;CL:0000236,2.29e-10,14;CL:0002087,1.48e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.03e-15;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.70e-12!10 | |ontology_enrichment_disease=DOID:0060058!8.70e-12!10 | ||
|ontology_enrichment_disease_v019=DOID:12603;2.58e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.58e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.70e-14!3;UBERON:0004854!1.70e-14!3;UBERON:0009034!1.70e-14!3;UBERON:0002095!1.70e-14!3;UBERON:0004782!1.70e-14!3;UBERON:0003281!1.70e-14!3;UBERON:0009664!1.70e-14!3;UBERON:0002296!1.70e-14!3;UBERON:0005602!1.70e-14!3;UBERON:0001179!1.70e-14!3;UBERON:0006293!1.70e-14!3;UBERON:0004177!1.06e-10!7;UBERON:0000178!1.04e-07!15;UBERON:0000179!1.04e-07!15;UBERON:0000463!1.04e-07!15;UBERON:0007023!8.62e-07!115 | |ontology_enrichment_uberon=UBERON:0002106!1.70e-14!3;UBERON:0004854!1.70e-14!3;UBERON:0009034!1.70e-14!3;UBERON:0002095!1.70e-14!3;UBERON:0004782!1.70e-14!3;UBERON:0003281!1.70e-14!3;UBERON:0009664!1.70e-14!3;UBERON:0002296!1.70e-14!3;UBERON:0005602!1.70e-14!3;UBERON:0001179!1.70e-14!3;UBERON:0006293!1.70e-14!3;UBERON:0004177!1.06e-10!7;UBERON:0000178!1.04e-07!15;UBERON:0000179!1.04e-07!15;UBERON:0000463!1.04e-07!15;UBERON:0007023!8.62e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.74e-12;3!UBERON:0004177;6.78e-08;5!UBERON:0005057;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.59e-12,3;UBERON:0004854,2.59e-12,3;UBERON:0009034,2.59e-12,3;UBERON:0002095,2.59e-12,3;UBERON:0004782,2.59e-12,3;UBERON:0003281,2.59e-12,3;UBERON:0009664,2.59e-12,3;UBERON:0002296,2.59e-12,3;UBERON:0005602,2.59e-12,3;UBERON:0001179,2.59e-12,3;UBERON:0006293,2.59e-12,3 | |||
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|short_description=p2@AY671148,p2@AY671772,p2@AY671782,p2@AY671783 | |short_description=p2@AY671148,p2@AY671772,p2@AY671782,p2@AY671783 | ||
}} | }} |
Latest revision as of 18:40, 24 July 2015
Short description: | p2@AY671148, p2@AY671772, p2@AY671782, p2@AY671783 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AY671148_5end, CAGE_peak_2_at_AY671772_5end, CAGE_peak_2_at_AY671782_5end, CAGE_peak_2_at_AY671783_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | -160bp_to_AY671148, AY671772, AY671782, AY671783_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.72e-22 | 24 |
pro-B cell | 1.72e-22 | 24 |
lymphocyte | 5.00e-16 | 53 |
common lymphoid progenitor | 5.00e-16 | 53 |
lymphoid lineage restricted progenitor cell | 1.01e-10 | 52 |
B cell | 2.29e-10 | 14 |
nongranular leukocyte | 1.48e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.59e-12 | 3 |
gastrointestinal system mesentery | 2.59e-12 | 3 |
stomach region | 2.59e-12 | 3 |
mesentery | 2.59e-12 | 3 |
gastrointestinal system serosa | 2.59e-12 | 3 |
mesentery of stomach | 2.59e-12 | 3 |
gut mesentery | 2.59e-12 | 3 |
dorsal mesentery | 2.59e-12 | 3 |
dorsal mesogastrium | 2.59e-12 | 3 |
peritoneal cavity | 2.59e-12 | 3 |
spleen primordium | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.58e-34 | 1 |