FFCP PHASE1:Hg19::chr14:106329545..106329563,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106329545..106329563,- | |||
|coexpression_cluster_id=C2087 | |coexpression_cluster_id=C2087 | ||
|description=CAGE_peak_at_chr14:106329545..106329563,- | |description=CAGE_peak_at_chr14:106329545..106329563,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.42e-64!24;CL:0000826!1.42e-64!24;CL:0000236!4.76e-38!14;CL:0000542!1.49e-32!53;CL:0000051!1.49e-32!53;CL:0000838!1.58e-30!52;CL:0000037!3.08e-16!172;CL:0000566!3.08e-16!172;CL:0002087!2.08e-15!119;CL:0000738!6.51e-15!140;CL:0000988!9.10e-15!182;CL:0002032!2.90e-12!165;CL:0000837!2.90e-12!165;CL:0002031!3.25e-11!124;CL:0000817!6.17e-09!3;CL:0000784!1.89e-08!3 | |ontology_enrichment_celltype=CL:0000945!1.42e-64!24;CL:0000826!1.42e-64!24;CL:0000236!4.76e-38!14;CL:0000542!1.49e-32!53;CL:0000051!1.49e-32!53;CL:0000838!1.58e-30!52;CL:0000037!3.08e-16!172;CL:0000566!3.08e-16!172;CL:0002087!2.08e-15!119;CL:0000738!6.51e-15!140;CL:0000988!9.10e-15!182;CL:0002032!2.90e-12!165;CL:0000837!2.90e-12!165;CL:0002031!3.25e-11!124;CL:0000817!6.17e-09!3;CL:0000784!1.89e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.38e-83;24!CL:0000236;2.69e-42;13!CL:0000542;1.55e-23;53 | |ontology_enrichment_celltype_v019=CL:0000945;3.38e-83;24!CL:0000236;2.69e-42;13!CL:0000542;1.55e-23;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.60e-83,24;CL:0000826,2.60e-83,24;CL:0000236,6.31e-47,14;CL:0000542,1.08e-38,53;CL:0000051,1.08e-38,53;CL:0000838,1.04e-35,52;CL:0002087,2.32e-16,115;CL:0000037,1.67e-15,168;CL:0000988,2.13e-14,177;CL:0000738,2.16e-14,136;CL:0002032,1.55e-12,161;CL:0000837,1.55e-12,161;CL:0002031,1.70e-12,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.55e-23;53!UBERON:0004872;1.46e-10;7 | |ontology_enrichment_development_v019=CL:0000051;1.55e-23;53!UBERON:0004872;1.46e-10;7 | ||
|ontology_enrichment_disease=DOID:2531!6.87e-10!51;DOID:0060083!6.87e-10!51;DOID:0060058!8.03e-10!10 | |ontology_enrichment_disease=DOID:2531!6.87e-10!51;DOID:0060083!6.87e-10!51;DOID:0060058!8.03e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.22e-11;10 | |ontology_enrichment_disease_v019=DOID:0060058;1.22e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.21e-11,10;DOID:2531,2.36e-07,51;DOID:0060083,2.36e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.11e-09!7;UBERON:0002106!3.30e-09!3;UBERON:0004854!3.30e-09!3;UBERON:0009034!3.30e-09!3;UBERON:0002095!3.30e-09!3;UBERON:0004782!3.30e-09!3;UBERON:0003281!3.30e-09!3;UBERON:0009664!3.30e-09!3;UBERON:0002296!3.30e-09!3;UBERON:0005602!3.30e-09!3;UBERON:0001179!3.30e-09!3;UBERON:0006293!3.30e-09!3;UBERON:0000178!1.13e-07!15;UBERON:0000179!1.13e-07!15;UBERON:0000463!1.13e-07!15 | |ontology_enrichment_uberon=UBERON:0004177!2.11e-09!7;UBERON:0002106!3.30e-09!3;UBERON:0004854!3.30e-09!3;UBERON:0009034!3.30e-09!3;UBERON:0002095!3.30e-09!3;UBERON:0004782!3.30e-09!3;UBERON:0003281!3.30e-09!3;UBERON:0009664!3.30e-09!3;UBERON:0002296!3.30e-09!3;UBERON:0005602!3.30e-09!3;UBERON:0001179!3.30e-09!3;UBERON:0006293!3.30e-09!3;UBERON:0000178!1.13e-07!15;UBERON:0000179!1.13e-07!15;UBERON:0000463!1.13e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.02e-14;3!UBERON:0002390;6.89e-09;32!UBERON:0004177;7.66e-09;5!UBERON:0005057;7.66e-09;5!UBERON:0002193;8.82e-08;42!UBERON:0002405;1.87e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0002106;2.02e-14;3!UBERON:0002390;6.89e-09;32!UBERON:0004177;7.66e-09;5!UBERON:0005057;7.66e-09;5!UBERON:0002193;8.82e-08;42!UBERON:0002405;1.87e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.54e-14,3;UBERON:0004854,2.54e-14,3;UBERON:0009034,2.54e-14,3;UBERON:0002095,2.54e-14,3;UBERON:0004782,2.54e-14,3;UBERON:0003281,2.54e-14,3;UBERON:0009664,2.54e-14,3;UBERON:0002296,2.54e-14,3;UBERON:0005602,2.54e-14,3;UBERON:0001179,2.54e-14,3;UBERON:0006293,2.54e-14,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8074188368443,8.70266248169425,9.20916141370047,0,0,0,0,0,0,10.2256704765998,4.83375390457233,2.05520307534393,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03984977845291,5.46138611262132,5.33705552318133,8.96133467389665,6.4063357925762,5.74752439954483,5.2883589822789,6.67837628174755,5.69212969109448,9.98303221930596,5.3518251937532,5.28685314316103,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,1.13929437434833,0.476463550915578,1.23408681925858,0,0,0.79312517629427,0,0,0,18.7661206876976,0.721346064882224,0.0711418433484141,0,0.798317485731266,0.191505370132367,5.29183956809707,0,0,2.05411211129873,0,0,1.52362600021443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59169090190492,0,0,16.4933639317833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0.547364367646998,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,2.96356662230246,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,1.48849806543585,0,3.41019275466509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,47.3591194067243,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65609664502632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1991373867136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,2.53756578545605,1.09578409555081,9.59435096879318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.248298857183432,0,0,0,0,0,3.50230675675855,0.286888821570705,0,0,0,0,0,0,0,0,0,1.20764276154616,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8074188368443,8.70266248169425,9.20916141370047,0,0,0,0,0,0,10.2256704765998,4.83375390457233,2.05520307534393,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03984977845291,5.46138611262132,5.33705552318133,8.96133467389665,6.4063357925762,5.74752439954483,5.2883589822789,6.67837628174755,5.69212969109448,9.98303221930596,5.3518251937532,5.28685314316103,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,1.13929437434833,0.476463550915578,1.23408681925858,0,0,0.79312517629427,0,0,0,18.7661206876976,0.721346064882224,0.0711418433484141,0,0.798317485731266,0.191505370132367,5.29183956809707,0,0,2.05411211129873,0,0,1.52362600021443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59169090190492,0,0,16.4933639317833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0.547364367646998,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,2.96356662230246,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,1.48849806543585,0,3.41019275466509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,47.3591194067243,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65609664502632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1991373867136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,2.53756578545605,1.09578409555081,9.59435096879318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.248298857183432,0,0,0,0,0,3.50230675675855,0.286888821570705,0,0,0,0,0,0,0,0,0,1.20764276154616,0.320568492303233 | ||
|short_description=p@chr14:106329545..106329563,- | |short_description=p@chr14:106329545..106329563,- | ||
}} | }} |
Latest revision as of 18:42, 24 July 2015
Short description: | p@chr14:106329545..106329563, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106329545..106329563, - |
Coexpression cluster: | C2087_myeloma_plasma_b_acute_B_CD19_splenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.60e-83 | 24 |
pro-B cell | 2.60e-83 | 24 |
B cell | 6.31e-47 | 14 |
lymphocyte | 1.08e-38 | 53 |
common lymphoid progenitor | 1.08e-38 | 53 |
lymphoid lineage restricted progenitor cell | 1.04e-35 | 52 |
nongranular leukocyte | 2.32e-16 | 115 |
hematopoietic stem cell | 1.67e-15 | 168 |
hematopoietic cell | 2.13e-14 | 177 |
leukocyte | 2.16e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.55e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 1.70e-12 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.54e-14 | 3 |
gastrointestinal system mesentery | 2.54e-14 | 3 |
stomach region | 2.54e-14 | 3 |
mesentery | 2.54e-14 | 3 |
gastrointestinal system serosa | 2.54e-14 | 3 |
mesentery of stomach | 2.54e-14 | 3 |
gut mesentery | 2.54e-14 | 3 |
dorsal mesentery | 2.54e-14 | 3 |
dorsal mesogastrium | 2.54e-14 | 3 |
peritoneal cavity | 2.54e-14 | 3 |
spleen primordium | 2.54e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.21e-11 | 10 |
hematologic cancer | 2.36e-07 | 51 |
immune system cancer | 2.36e-07 | 51 |