FFCP PHASE1:Hg19::chr15:46610897..46610904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:46610897..46610904,+ | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr15:46610897..46610904,+ | |description=CAGE_peak_at_chr15:46610897..46610904,+ | ||
|id=chr15:46610897..46610904,+ | |id=chr15:46610897..46610904,+ | ||
|ontology_enrichment_celltype=CL:0000242!7.41e-67!2;CL:0000095!2.32e-28!17;CL:0000123!2.32e-28!17;CL:0000312!1.59e-27!5;CL:0000240!3.88e-23!6;CL:0000311!3.88e-23!6;CL:0000079!3.88e-23!6;CL:0000237!3.88e-23!6;CL:0000036!3.88e-23!6;CL:0000357!3.88e-23!6;CL:0000114!3.88e-23!6;CL:0002319!3.53e-20!25;CL:0000362!1.22e-17!8;CL:0000333!6.51e-13!41;CL:0002159!2.90e-11!13;CL:0000306!1.57e-09!4;CL:0002222!1.57e-09!4;CL:0002224!1.57e-09!4;CL:0000133!2.88e-09!59;CL:0000243!8.90e-09!15;CL:0000125!8.90e-09!15;CL:0000030!8.90e-09!15;CL:0000339!8.90e-09!15;CL:0000325!2.13e-08!39;CL:0000221!7.95e-08!71;CL:0000035!1.17e-07!20 | |ontology_enrichment_celltype=CL:0000242!7.41e-67!2;CL:0000095!2.32e-28!17;CL:0000123!2.32e-28!17;CL:0000312!1.59e-27!5;CL:0000240!3.88e-23!6;CL:0000311!3.88e-23!6;CL:0000079!3.88e-23!6;CL:0000237!3.88e-23!6;CL:0000036!3.88e-23!6;CL:0000357!3.88e-23!6;CL:0000114!3.88e-23!6;CL:0002319!3.53e-20!25;CL:0000362!1.22e-17!8;CL:0000333!6.51e-13!41;CL:0002159!2.90e-11!13;CL:0000306!1.57e-09!4;CL:0002222!1.57e-09!4;CL:0002224!1.57e-09!4;CL:0000133!2.88e-09!59;CL:0000243!8.90e-09!15;CL:0000125!8.90e-09!15;CL:0000030!8.90e-09!15;CL:0000339!8.90e-09!15;CL:0000325!2.13e-08!39;CL:0000221!7.95e-08!71;CL:0000035!1.17e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000123;3.29e-195;2!CL:0000242;3.29e-195;2!CL:0000312;3.49e-79;5!CL:0000240;2.83e-66;6!CL:0000311;2.83e-66;6!CL:0000079;2.83e-66;6!CL:0000237;2.83e-66;6!CL:0000362;9.75e-45;9!CL:0002159;2.55e-29;14!CL:0000095;5.37e-22;17!CL:0002319;6.71e-16;25!CL:0002077;1.76e-12;34!CL:0000076;1.46e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.29e-195,2;CL:0000312,3.49e-79,5;CL:0000240,2.83e-66,6;CL:0000311,2.83e-66,6;CL:0000079,2.83e-66,6;CL:0000237,2.83e-66,6;CL:0000036,2.83e-66,6;CL:0000357,2.83e-66,6;CL:0000114,2.83e-66,6;CL:0000362,9.75e-45,9;CL:0002159,2.55e-29,14;CL:0000095,5.37e-22,17;CL:0000123,5.37e-22,17;CL:0002319,6.71e-16,25;CL:0002077,6.62e-13,34;CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;2.83e-66;6!CL:0000114;2.83e-66;6 | |||
|ontology_enrichment_disease=DOID:3093!5.08e-12!11;DOID:5409!1.70e-09!4 | |ontology_enrichment_disease=DOID:3093!5.08e-12!11;DOID:5409!1.70e-09!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001003!1.57e-10!14;UBERON:0007376!1.57e-10!14;UBERON:0007383!1.57e-10!14;UBERON:0010077!1.57e-09!4;UBERON:0005389!1.57e-09!4;UBERON:0000484!1.57e-09!4;UBERON:0002546!1.57e-09!4;UBERON:0000965!1.57e-09!4;UBERON:0001803!1.57e-09!4;UBERON:0003073!1.57e-09!4;UBERON:0005426!1.57e-09!4;UBERON:0000966!6.13e-08!5;UBERON:0005388!6.13e-08!5;UBERON:0001802!6.13e-08!5;UBERON:0000019!6.15e-08!19;UBERON:0000047!6.15e-08!19;UBERON:0004088!6.15e-08!19;UBERON:0003072!6.15e-08!19;UBERON:0003071!6.15e-08!19;UBERON:0004128!6.15e-08!19;UBERON:0000970!1.38e-07!20;UBERON:0002104!2.86e-07!21;UBERON:0001456!2.86e-07!21 | |ontology_enrichment_uberon=UBERON:0001003!1.57e-10!14;UBERON:0007376!1.57e-10!14;UBERON:0007383!1.57e-10!14;UBERON:0010077!1.57e-09!4;UBERON:0005389!1.57e-09!4;UBERON:0000484!1.57e-09!4;UBERON:0002546!1.57e-09!4;UBERON:0000965!1.57e-09!4;UBERON:0001803!1.57e-09!4;UBERON:0003073!1.57e-09!4;UBERON:0005426!1.57e-09!4;UBERON:0000966!6.13e-08!5;UBERON:0005388!6.13e-08!5;UBERON:0001802!6.13e-08!5;UBERON:0000019!6.15e-08!19;UBERON:0000047!6.15e-08!19;UBERON:0004088!6.15e-08!19;UBERON:0003072!6.15e-08!19;UBERON:0003071!6.15e-08!19;UBERON:0004128!6.15e-08!19;UBERON:0000970!1.38e-07!20;UBERON:0002104!2.86e-07!21;UBERON:0001456!2.86e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.82e-27;15!UBERON:0007376;1.82e-27;15!UBERON:0010371;1.84e-13;31!UBERON:0003102;8.54e-09;50!UBERON:0002097;3.55e-08;41!UBERON:0002199;1.47e-07;46!UBERON:0002416;1.47e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.82e-27,15;UBERON:0007376,1.82e-27,15;UBERON:0007383,1.82e-27,15;UBERON:0002097,6.32e-11,41;UBERON:0002199,7.07e-10,46;UBERON:0002416,7.07e-10,46 | |||
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|short_description=p@chr15:46610897..46610904,+ | |short_description=p@chr15:46610897..46610904,+ | ||
}} | }} |
Latest revision as of 02:05, 25 July 2015
Short description: | p@chr15:46610897..46610904, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:46610897..46610904, + |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.29e-195 | 2 |
keratinocyte | 3.49e-79 | 5 |
stratified squamous epithelial cell | 2.83e-66 | 6 |
keratin accumulating cell | 2.83e-66 | 6 |
stratified epithelial cell | 2.83e-66 | 6 |
keratinizing barrier epithelial cell | 2.83e-66 | 6 |
epithelial fate stem cell | 2.83e-66 | 6 |
stratified epithelial stem cell | 2.83e-66 | 6 |
surface ectodermal cell | 2.83e-66 | 6 |
epidermal cell | 9.75e-45 | 9 |
general ecto-epithelial cell | 2.55e-29 | 14 |
neuron associated cell | 5.37e-22 | 17 |
neuron associated cell (sensu Vertebrata) | 5.37e-22 | 17 |
neural cell | 6.71e-16 | 25 |
ecto-epithelial cell | 6.62e-13 | 34 |
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.82e-27 | 15 |
outer epithelium | 1.82e-27 | 15 |
enveloping layer of ectoderm | 1.82e-27 | 15 |
skin of body | 6.32e-11 | 41 |
integument | 7.07e-10 | 46 |
integumental system | 7.07e-10 | 46 |