FFCP PHASE1:Hg19::chr16:29832634..29832661,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:29832634..29832661,+ | |||
|description=CAGE_peak_at_chr16:29832634..29832661,+ | |description=CAGE_peak_at_chr16:29832634..29832661,+ | ||
|id=chr16:29832634..29832661,+ | |id=chr16:29832634..29832661,+ | ||
|ontology_enrichment_celltype=CL:0000548!4.45e-13!679;CL:0000004!4.45e-13!679;CL:0000255!4.45e-13!679;CL:0000012!1.87e-12!682;CL:0000220!1.83e-10!246;CL:0002371!2.53e-10!591;CL:0002321!5.13e-10!248;CL:0000144!5.31e-10!625;CL:0000066!1.34e-08!254;CL:0000003!2.92e-08!722;CL:0000055!7.26e-08!180;CL:0000192!1.20e-07!42;CL:0000514!1.20e-07!42;CL:0000359!3.58e-07!32;CL:0000222!7.92e-07!119 | |ontology_enrichment_celltype=CL:0000548!4.45e-13!679;CL:0000004!4.45e-13!679;CL:0000255!4.45e-13!679;CL:0000012!1.87e-12!682;CL:0000220!1.83e-10!246;CL:0002371!2.53e-10!591;CL:0002321!5.13e-10!248;CL:0000144!5.31e-10!625;CL:0000066!1.34e-08!254;CL:0000003!2.92e-08!722;CL:0000055!7.26e-08!180;CL:0000192!1.20e-07!42;CL:0000514!1.20e-07!42;CL:0000359!3.58e-07!32;CL:0000222!7.92e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000075;1.75e-09;27!CL:0002559;7.03e-08;5!CL:0000710;2.01e-07;20!CL:0002077;3.64e-07;34!CL:0000244;3.99e-07;4!CL:0000731;3.99e-07;4!CL:1000507;8.78e-07;10!CL:1000494;8.78e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,1.52e-09,27;CL:0002077,2.34e-08,34;CL:0002559,4.69e-08,5;CL:0000710,1.17e-07,20;CL:0000244,4.95e-07,4;CL:0000731,4.95e-07,4;CL:0002539,5.38e-07,10;CL:1000507,9.67e-07,10;CL:1000494,9.67e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!9.20e-09!82;UBERON:0002100!3.71e-08!216;UBERON:0005256!1.29e-07!143;UBERON:0000914!1.71e-07!83;UBERON:0002329!1.71e-07!83;UBERON:0003077!1.71e-07!83;UBERON:0003059!1.71e-07!83;UBERON:0007282!1.71e-07!83;UBERON:0009618!1.71e-07!83;UBERON:0007285!1.71e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;7.03e-08;5!UBERON:0006554;3.97e-07;30!UBERON:0001008;3.97e-07;30!UBERON:0004211;8.78e-07;10!UBERON:0009773;8.78e-07;10!UBERON:0001231;8.78e-07;10!UBERON:0004810;8.78e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,4.69e-08,5;UBERON:0005086,4.69e-08,5;UBERON:0004237,5.38e-07,10;UBERON:0004695,5.38e-07,10;UBERON:0002111,5.38e-07,10;UBERON:0004178,5.38e-07,10;UBERON:0005910,7.20e-07,6;UBERON:0004810,9.67e-07,10 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,2.79120467188971,0,0,1.48519623552056,1.32558950291166,2.01697543935533,0.602694528023977,0,1.46379839637152,0,0.204000691244253,0,0,0,0,0.534893840235659,0.821005894499457,0.472264687882075,0,0,0,2.75826367343678,0.90361775633475,1.84877005083394,0,0,0,0,0,0.217010870715852,0.447830948479849,0,0.515151135268373,0,0,0,0.232429036905685,0,0.619412741790207,0,0.512321413058201,0.709446689665756,0.344745680736619,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0.580418477257168,0,0,0.251248665256743,0.521482918420201,0.217188844705117,1.21079900526674,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0.445641827540694,0,0,0.270803863765016,0.768547918354051,0.260118695119756,0.328875809207352,0.276350017785848,0,0,0,0,0.339928028092699,0.766440987203842,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0,0.511946444617674,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,1.00267582127178,0.724232594804119,0,0,0.0945348171640679,0,0.087834785693126,0.392937226493138,2.5500670180478,0.370784442784429,0,0.348259474598534,1.06366368415092,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0,0,0,1.04497483268405,1.55050055501597,1.06729878806013,1.00416183829401,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0.872188104285069,0.993943903390637,0.506522046658319,1.58891016975863,0,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.937285727335186,0.624320153660641,0.570471821544449,0.298897361103602,0.23486899728753,0.161872944368132,0,1.63323337003915,0.122834317311768,1.23990937410919,0,0.989067717114227,0.910161361938026,1.43723628363248,0.336672227908132,0.250237039743928,0.831192346452549,0,0.612975591598039,1.50238058906597,0,0.538168907066586,0.213557388818567,0.423863802319124,0.600182192168805,0.824420233907511,1.54584324027377,0.744467425326359,0.506328996723799,0.389748020644795,0.757301322732344,0.368199594569197,0.484938170456436,0,0.10075209822764,0,1.73934767846967,0.545492241181669,0.860413786167011,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,1.85747171212792,3.60939740834793,0.236613600079688,0.674338760312407,0,0.330881918197182,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.245976877086227,0.514703430895577,0.878002283269004,0,0.703702806881416,0.185176890317059,0.325808305310325,1.03993478527958,0,0.115930404975077,0.234817388471643,0.866198686566443,0,0.190254152234598,0,0,0.492434012174795,0.936017060556951,1.0404181360211,0.93733833986777,1.17587489739202,0.425325291727159,0.358234090811393,0.290633938513962,0.383382679165211,0,0.880484340132261,0.829312462163088,0.720599767084807,0.6312121671319,0.63497894292169,1.90994212779139,8.20522130470329,1.71072446022705,1.23392991243988,2.10240140490742,1.42913216315289,0,0,0.1466765716419,0.258543431515556,3.57656445851882,0,0,1.04007436911366,0,0,0,0,1.62786481617433,0.823240336780769,0,0,0,1.80863626235752,0,1.29964888536674,0,0.502257091432126,0,0.239624855491583,0,0,0.579125226670317,0.410952645100767,0.537182889719687,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,1.66376689224646,2.67643483195743,2.05013139544115,2.22568688486155,0,0,1.03473071292505,0,0.184369168541703,0.260650843404249,1.76221041716467,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.841980283299221,0.128139149255701,0,0.482561763430822,1.48418066444991,0.154209693802656,1.06537035187876,0.164254312027618,1.03850885836724,0.581051892299796,0,2.80709058424599,0.276242966807689,0.34444334449382,0.910455840033585,1.04899531967539,1.35359883872224,0.462092022626489,1.56869953835371,2.92278449306521,0.633309773357254,0,0.340187410553031,0,0,0.270946437543853,2.50844886927427,1.27438136522519,3.3243040357149,1.11937377361089,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0.574265537996172,3.90036147621913,0,0.290012154876366,0.308097234229289,0.767518373630648,0.275673144969061,0.214840489736547,0.290033387828457,0.170453254832202,0.0890320356467374,0.165284915360978,0.384380134730212,1.40373983744043,1.11273558941105,1.85938219718914,1.5740617341532,2.0911118104818,0.616067160352178,1.59691809095107,2.60979897622522,1.11194531462352,0.572499546967965,0.744316738719335,0.949138274156178,1.5250415513906,0.511795582622668,0.42793898803392,0.95460974377781,0.78494864019923,0.359744915166629,0,0.353437207037059,1.01091240786658,0,1.26377536871694,0,0.487426979262569,0,0.545999645631943,0.989838023675989,1.13008116620243,0.551365343546124,1.99031692572366,0.876901770507525,0.578775534266688,0.655894752046633,0,0.6196469961995,0.281695602532241,0.14341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| ||
|short_description=p@chr16:29832634..29832661,+ | |short_description=p@chr16:29832634..29832661,+ | ||
}} | }} |
Latest revision as of 07:56, 25 July 2015
Short description: | p@chr16:29832634..29832661, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29832634..29832661, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 1.52e-09 | 27 |
ecto-epithelial cell | 2.34e-08 | 34 |
hair follicle cell | 4.69e-08 | 5 |
neurecto-epithelial cell | 1.17e-07 | 20 |
transitional epithelial cell | 4.95e-07 | 4 |
urothelial cell | 4.95e-07 | 4 |
aortic smooth muscle cell | 5.38e-07 | 10 |
kidney tubule cell | 9.67e-07 | 10 |
nephron tubule epithelial cell | 9.67e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 4.69e-08 | 5 |
hair follicle placode | 4.69e-08 | 5 |
blood vessel smooth muscle | 5.38e-07 | 10 |
arterial system smooth muscle | 5.38e-07 | 10 |
artery smooth muscle tissue | 5.38e-07 | 10 |
aorta smooth muscle tissue | 5.38e-07 | 10 |
transitional epithelium | 7.20e-07 | 6 |
nephron tubule epithelium | 9.67e-07 | 10 |