FFCP PHASE1:Hg19::chr17:30745..30746,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:30745..30746,-
|short_description=p@chr17:30745..30746,-
|description=CAGE_peak_at_chr17:30745..30746,-
|association_with_transcript=NA
|EntrezGene=NA
|...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:30745..30746,- | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_at_chr17:30745..30746,- | |||
|id=chr17:30745..30746,- | |||
|ontology_enrichment_celltype=CL:0000057!2.47e-23!75;CL:0000055!5.97e-23!180;CL:0002620!5.59e-21!23;CL:0000048!9.44e-14!430;CL:0000723!2.99e-13!436;CL:0000034!1.32e-12!444;CL:0002334!7.77e-09!12;CL:0002320!1.30e-08!365;CL:0000134!1.43e-08!358;CL:0002371!1.63e-08!591;CL:0000192!4.50e-08!42;CL:0000514!4.50e-08!42;CL:0000219!2.63e-07!390;CL:0000144!9.57e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.87e-17;23!CL:0000346;1.11e-09;3!CL:1000428;1.11e-09;3!CL:0000135;4.17e-09;3!CL:0000388;4.17e-09;3!CL:0000228;8.55e-08;1!CL:0002372;8.55e-08;1!CL:0002616;1.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.03e-16,23;CL:0000057,9.29e-16,76;CL:0000346,1.09e-09,3;CL:1000428,1.09e-09,3;CL:0000135,6.05e-09,3;CL:0000388,6.05e-09,3;CL:0000228,6.80e-08,1;CL:0002372,6.80e-08,1;CL:0002616,1.58e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.25e-10!5;DOID:450!1.25e-10!5;DOID:66!1.25e-10!5;DOID:423!1.25e-10!5;DOID:0080000!1.25e-10!5;DOID:11722!1.25e-10!5;DOID:2394!2.89e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:17;3.31e-12;5!DOID:450;3.31e-12;5!DOID:66;3.31e-12;5!DOID:423;3.31e-12;5!DOID:0080000;3.31e-12;5!DOID:11722;3.31e-12;5!DOID:3571;5.57e-08;1!DOID:4235;1.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.01e-12,5;DOID:450,4.01e-12,5;DOID:66,4.01e-12,5;DOID:423,4.01e-12,5;DOID:0080000,4.01e-12,5;DOID:11722,4.01e-12,5;DOID:3571,5.58e-08,1;DOID:4235,1.30e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.18e-17!45;UBERON:0002416!7.18e-17!45;UBERON:0002097!2.39e-16!40;UBERON:0003102!1.15e-11!95;UBERON:0000914!1.76e-11!83;UBERON:0002329!1.76e-11!83;UBERON:0003077!1.76e-11!83;UBERON:0003059!1.76e-11!83;UBERON:0007282!1.76e-11!83;UBERON:0009618!1.76e-11!83;UBERON:0007285!1.76e-11!83;UBERON:0002384!6.54e-09!375;UBERON:0004290!2.02e-08!70;UBERON:0000992!1.28e-07!13;UBERON:0000486!4.61e-07!82;UBERON:0002119!7.40e-07!4;UBERON:0004531!7.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.94e-12;41!UBERON:0000412;1.11e-09;3!UBERON:0001992;1.11e-09;3!UBERON:0007846;4.17e-09;3!UBERON:0000043;4.17e-09;3!UBERON:0007845;4.17e-09;3!UBERON:0002199;3.92e-08;46!UBERON:0002416;3.92e-08;46!UBERON:0003102;3.15e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.18e-14,41;UBERON:0002199,3.14e-12,46;UBERON:0002416,3.14e-12,46;UBERON:0000412,1.09e-09,3;UBERON:0001992,1.09e-09,3;UBERON:0007846,6.05e-09,3;UBERON:0000043,6.05e-09,3;UBERON:0007845,6.05e-09,3;UBERON:0003102,4.37e-07,99 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0.994192127183747,0,1.20538905604795,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.794455084879313,0.860509862246441,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0,0,0,0,0,0.989067717114227,0,0,0.168336113954066,0,0,3.5118209670467,0.30648779579902,2.40380894250555,0,3.22901344239952,0.85422955527427,0.847727604638247,3.30100205692843,1.13357782162283,2.31876486041066,2.23340227597908,0.843881661206331,0.974370051611986,1.7670364197088,0,0.323292113637624,4.9701342952326,0.906768884048762,2.37384829234683,0,0,0,0,0,0,0,0,0,3.12899064659632,2.57296375277154,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12750493267896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.892144943985809,1.10391690523754,0.702848489956279,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0,1.99500565274481,0.841980283299221,0.256278298511402,0.511707249066704,1.76939313257968,0,0.462629081407967,0.355123450626254,0,0,0.697262270759755,0,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,1.88887408098384,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0.589062011728432,0,0,0,0,0.487426979262569,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0.466311601748341,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0.797525143673985,1.04349012362347,0,0,0,1.45478927362048,0,4.17630383890644,0.796191777397232,0,1.37358282073117,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22603045457393,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,1.29787968637137,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.363356758541113,0.856402095563933,0,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0.994192127183747,0,1.20538905604795,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.794455084879313,0.860509862246441,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0,0,0,0,0,0.989067717114227,0,0,0.168336113954066,0,0,3.5118209670467,0.30648779579902,2.40380894250555,0,3.22901344239952,0.85422955527427,0.847727604638247,3.30100205692843,1.13357782162283,2.31876486041066,2.23340227597908,0.843881661206331,0.974370051611986,1.7670364197088,0,0.323292113637624,4.9701342952326,0.906768884048762,2.37384829234683,0,0,0,0,0,0,0,0,0,3.12899064659632,2.57296375277154,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12750493267896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.892144943985809,1.10391690523754,0.702848489956279,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0,1.99500565274481,0.841980283299221,0.256278298511402,0.511707249066704,1.76939313257968,0,0.462629081407967,0.355123450626254,0,0,0.697262270759755,0,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,1.88887408098384,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0.589062011728432,0,0,0,0,0.487426979262569,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0.466311601748341,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0.797525143673985,1.04349012362347,0,0,0,1.45478927362048,0,4.17630383890644,0.796191777397232,0,1.37358282073117,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22603045457393,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,1.29787968637137,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr17:30745..30746,- | |||
}} | }} |
Latest revision as of 15:26, 25 July 2015
Short description: | p@chr17:30745..30746, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:30745..30746, - |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.03e-16 | 23 |
fibroblast | 9.29e-16 | 76 |
hair follicle dermal papilla cell | 1.09e-09 | 3 |
stem cell of epidermis | 1.09e-09 | 3 |
fibrocyte | 6.05e-09 | 3 |
tendon cell | 6.05e-09 | 3 |
multinucleate cell | 6.80e-08 | 1 |
myotube | 6.80e-08 | 1 |
perirenal adipocyte cell | 1.58e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.18e-14 | 41 |
integument | 3.14e-12 | 46 |
integumental system | 3.14e-12 | 46 |
dermal papilla | 1.09e-09 | 3 |
papillary layer of dermis | 1.09e-09 | 3 |
dense regular connective tissue | 6.05e-09 | 3 |
tendon | 6.05e-09 | 3 |
regular connective tissue | 6.05e-09 | 3 |
surface structure | 4.37e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.01e-12 | 5 |
myotonic disease | 4.01e-12 | 5 |
muscle tissue disease | 4.01e-12 | 5 |
myopathy | 4.01e-12 | 5 |
muscular disease | 4.01e-12 | 5 |
myotonic dystrophy | 4.01e-12 | 5 |
liver cancer | 5.58e-08 | 1 |
spindle cell sarcoma | 1.30e-07 | 1 |