FFCP PHASE1:Hg19::chr17:39658981..39659006,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39658981..39659006,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr17:39658981..39659006,+ | |description=CAGE_peak_at_chr17:39658981..39659006,+ | ||
|id=chr17:39658981..39659006,+ | |id=chr17:39658981..39659006,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.95e-20;1!UBERON:0000358;3.91e-19;1!UBERON:0008814;1.98e-10;2!UBERON:0010056;1.98e-10;2 | |||
|ontology_enrichment_disease=DOID:1749!2.69e-12!14;DOID:3151!1.84e-08!1;DOID:3149!1.84e-08!1 | |ontology_enrichment_disease=DOID:1749!2.69e-12!14;DOID:3151!1.84e-08!1;DOID:3149!1.84e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!2.41e-15!2;UBERON:0000161!5.90e-12!35;UBERON:0001723!5.06e-11!3;UBERON:0001033!5.06e-11!3;UBERON:0010056!5.06e-11!3;UBERON:0003126!8.22e-10!7;UBERON:0001005!8.22e-10!7;UBERON:0002372!9.46e-09!1;UBERON:0001961!9.46e-09!1;UBERON:0001744!9.46e-09!1;UBERON:0001735!9.46e-09!1;UBERON:0000166!1.65e-08!21;UBERON:0007196!2.16e-08!14;UBERON:0001558!2.16e-08!14;UBERON:0000997!4.07e-08!1;UBERON:0005056!4.07e-08!1;UBERON:0001042!2.86e-07!10;UBERON:0009145!2.86e-07!10;UBERON:0000072!5.88e-07!46;UBERON:0000077!6.69e-07!130;UBERON:0001004!9.88e-07!72 | |ontology_enrichment_uberon=UBERON:0003127!2.41e-15!2;UBERON:0000161!5.90e-12!35;UBERON:0001723!5.06e-11!3;UBERON:0001033!5.06e-11!3;UBERON:0010056!5.06e-11!3;UBERON:0003126!8.22e-10!7;UBERON:0001005!8.22e-10!7;UBERON:0002372!9.46e-09!1;UBERON:0001961!9.46e-09!1;UBERON:0001744!9.46e-09!1;UBERON:0001735!9.46e-09!1;UBERON:0000166!1.65e-08!21;UBERON:0007196!2.16e-08!14;UBERON:0001558!2.16e-08!14;UBERON:0000997!4.07e-08!1;UBERON:0005056!4.07e-08!1;UBERON:0001042!2.86e-07!10;UBERON:0009145!2.86e-07!10;UBERON:0000072!5.88e-07!46;UBERON:0000077!6.69e-07!130;UBERON:0001004!9.88e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.81e-25;3!UBERON:0001033;2.81e-25;3!UBERON:0005795;1.30e-19;1!UBERON:0002372;3.25e-19;1!UBERON:0001961;3.25e-19;1!UBERON:0001744;3.25e-19;1!UBERON:0001042;3.25e-19;1!UBERON:0001735;3.25e-19;1!UBERON:0000002;4.81e-13;6!UBERON:0001560;4.81e-13;6!UBERON:0000341;2.37e-10;2!UBERON:0006562;2.72e-10;2!UBERON:0001043;1.82e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.99e-25,3;UBERON:0001033,2.99e-25,3;UBERON:0010056,2.99e-25,3;UBERON:0002372,3.25e-19,1;UBERON:0001961,3.25e-19,1;UBERON:0001744,3.25e-19,1;UBERON:0001735,3.25e-19,1;UBERON:0001042,5.86e-17,10;UBERON:0009145,5.86e-17,10;UBERON:0006562,1.76e-15,11;UBERON:0000002,4.81e-13,6;UBERON:0001560,4.81e-13,6;UBERON:0000341,2.27e-10,2;UBERON:0001557,3.15e-09,19;UBERON:0005795,4.66e-08,22;UBERON:0000166,4.78e-08,22;UBERON:0001043,1.82e-07,3;UBERON:0009143,1.82e-07,3 | |||
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|short_description=p@chr17:39658981..39659006,+ | |short_description=p@chr17:39658981..39659006,+ | ||
}} | }} |
Latest revision as of 16:40, 25 July 2015
Short description: | p@chr17:39658981..39659006, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39658981..39659006, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.99e-25 | 3 |
gustatory system | 2.99e-25 | 3 |
future tongue | 2.99e-25 | 3 |
tonsil | 3.25e-19 | 1 |
mucosa-associated lymphoid tissue | 3.25e-19 | 1 |
lymphoid tissue | 3.25e-19 | 1 |
tonsillar ring | 3.25e-19 | 1 |
chordate pharynx | 5.86e-17 | 10 |
pharyngeal region of foregut | 5.86e-17 | 10 |
pharynx | 1.76e-15 | 11 |
uterine cervix | 4.81e-13 | 6 |
neck of organ | 4.81e-13 | 6 |
throat | 2.27e-10 | 2 |
upper respiratory tract | 3.15e-09 | 19 |
embryonic uterus | 4.66e-08 | 22 |
oral opening | 4.78e-08 | 22 |
esophagus | 1.82e-07 | 3 |
esophageal region | 1.82e-07 | 3 |