FFCP PHASE1:Hg19::chr17:56410622..56410633,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:56410622..56410633,- | |||
|coexpression_cluster_id=C1692 | |||
|description=CAGE_peak_at_chr17:56410622..56410633,- | |description=CAGE_peak_at_chr17:56410622..56410633,- | ||
|id=chr17:56410622..56410633,- | |id=chr17:56410622..56410633,- | ||
|ontology_enrichment_celltype=CL:0000988!2.37e-44!182;CL:0000037!3.05e-44!172;CL:0000566!3.05e-44!172;CL:0002032!3.91e-38!165;CL:0000837!3.91e-38!165;CL:0000738!1.81e-35!140;CL:0002087!3.71e-31!119;CL:0000542!1.24e-25!53;CL:0000051!1.24e-25!53;CL:0002031!6.27e-25!124;CL:0000838!2.92e-24!52;CL:0000763!1.01e-14!112;CL:0000049!1.01e-14!112;CL:0000084!4.25e-13!25;CL:0000827!4.25e-13!25;CL:0000134!1.16e-12!358;CL:0000945!3.35e-12!24;CL:0000826!3.35e-12!24;CL:0002320!4.12e-12!365;CL:0000219!3.42e-10!390;CL:0000080!4.05e-10!6;CL:0000766!4.50e-08!76;CL:0000048!6.19e-08!430;CL:0000842!1.07e-07!3;CL:0000723!1.28e-07!436;CL:0000034!3.27e-07!444 | |ontology_enrichment_celltype=CL:0000988!2.37e-44!182;CL:0000037!3.05e-44!172;CL:0000566!3.05e-44!172;CL:0002032!3.91e-38!165;CL:0000837!3.91e-38!165;CL:0000738!1.81e-35!140;CL:0002087!3.71e-31!119;CL:0000542!1.24e-25!53;CL:0000051!1.24e-25!53;CL:0002031!6.27e-25!124;CL:0000838!2.92e-24!52;CL:0000763!1.01e-14!112;CL:0000049!1.01e-14!112;CL:0000084!4.25e-13!25;CL:0000827!4.25e-13!25;CL:0000134!1.16e-12!358;CL:0000945!3.35e-12!24;CL:0000826!3.35e-12!24;CL:0002320!4.12e-12!365;CL:0000219!3.42e-10!390;CL:0000080!4.05e-10!6;CL:0000766!4.50e-08!76;CL:0000048!6.19e-08!430;CL:0000842!1.07e-07!3;CL:0000723!1.28e-07!436;CL:0000034!3.27e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.80e-21;24!CL:0000236;1.89e-14;13!CL:0000542;5.18e-13;53!CL:0000775;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.46e-21,24;CL:0000826,7.46e-21,24;CL:0000838,2.05e-18,52;CL:0000542,4.58e-18,53;CL:0000051,4.58e-18,53;CL:0000236,1.41e-13,14;CL:0000738,2.62e-11,136;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0002032,1.79e-09,161;CL:0000837,1.79e-09,161;CL:0002087,4.04e-08,115;CL:0000775,6.34e-08,3;CL:0002031,9.03e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;5.18e-13;53 | |||
|ontology_enrichment_disease=DOID:2531!3.16e-26!51;DOID:0060083!3.16e-26!51;DOID:0060058!1.68e-17!10;DOID:1240!4.72e-17!39;DOID:8692!7.68e-10!31 | |ontology_enrichment_disease=DOID:2531!3.16e-26!51;DOID:0060083!3.16e-26!51;DOID:0060058!1.68e-17!10;DOID:1240!4.72e-17!39;DOID:8692!7.68e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.92e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.54e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.72e-15!102;UBERON:0003061!9.72e-15!102;UBERON:0002193!1.10e-12!112;UBERON:0000178!5.85e-12!15;UBERON:0000179!5.85e-12!15;UBERON:0000463!5.85e-12!15;UBERON:0002384!2.29e-11!375;UBERON:0004177!4.51e-08!7 | |ontology_enrichment_uberon=UBERON:0002390!9.72e-15!102;UBERON:0003061!9.72e-15!102;UBERON:0002193!1.10e-12!112;UBERON:0000178!5.85e-12!15;UBERON:0000179!5.85e-12!15;UBERON:0000463!5.85e-12!15;UBERON:0002384!2.29e-11!375;UBERON:0004177!4.51e-08!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr17:56410622..56410633,- | |short_description=p@chr17:56410622..56410633,- | ||
}} | }} |
Latest revision as of 19:17, 25 July 2015
Short description: | p@chr17:56410622..56410633, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:56410622..56410633, - |
Coexpression cluster: | C1692_CD19_diffuse_Hodgkin_Neutrophils_Dendritic_colon_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.46e-21 | 24 |
pro-B cell | 7.46e-21 | 24 |
lymphoid lineage restricted progenitor cell | 2.05e-18 | 52 |
lymphocyte | 4.58e-18 | 53 |
common lymphoid progenitor | 4.58e-18 | 53 |
B cell | 1.41e-13 | 14 |
leukocyte | 2.62e-11 | 136 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.79e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-09 | 161 |
nongranular leukocyte | 4.04e-08 | 115 |
neutrophil | 6.34e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 9.03e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.54e-09 | 10 |