FFCP PHASE1:Hg19::chr17:68130483..68130490,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:68130483..68130490,+ | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_at_chr17:68130483..68130490,+ | |description=CAGE_peak_at_chr17:68130483..68130490,+ | ||
|id=chr17:68130483..68130490,+ | |id=chr17:68130483..68130490,+ | ||
|ontology_enrichment_celltype=CL:0002541!8.61e-13!3 | |ontology_enrichment_celltype=CL:0002541!8.61e-13!3 | ||
|ontology_enrichment_celltype_v019=CL:0000313;2.37e-29;1!CL:0000159;2.05e-15;2!CL:0002541;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,4.20e-29,1;CL:0000159,2.74e-15,2;CL:0002541,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.28e-23;5 | |||
|ontology_enrichment_disease=DOID:4468!6.22e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.37e-29;1!DOID:4468;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.20e-29,1;DOID:4468,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.96e-21!115;UBERON:0001049!6.59e-19!57;UBERON:0005068!6.59e-19!57;UBERON:0006241!6.59e-19!57;UBERON:0007135!6.59e-19!57;UBERON:0002298!3.50e-17!8;UBERON:0002616!5.01e-16!59;UBERON:0001017!1.23e-14!82;UBERON:0000955!1.70e-14!69;UBERON:0006238!1.70e-14!69;UBERON:0003075!5.59e-14!86;UBERON:0007284!5.59e-14!86;UBERON:0005743!9.63e-14!86;UBERON:0002346!3.81e-13!90;UBERON:0000476!8.61e-13!3;UBERON:0000920!8.61e-13!3;UBERON:0000988!1.13e-12!3;UBERON:0006331!1.23e-12!3;UBERON:0000073!5.21e-12!94;UBERON:0001016!5.21e-12!94;UBERON:0003076!7.76e-12!15;UBERON:0003057!7.76e-12!15;UBERON:0004733!4.02e-11!12;UBERON:0002028!4.02e-11!12;UBERON:0007277!4.02e-11!12;UBERON:0002308!1.07e-10!9;UBERON:0000125!1.07e-10!9;UBERON:0000489!2.08e-10!32;UBERON:0002780!2.94e-10!41;UBERON:0001890!2.94e-10!41;UBERON:0006240!2.94e-10!41;UBERON:0002113!3.00e-10!27;UBERON:0003918!3.00e-10!27;UBERON:0005095!3.00e-10!27;UBERON:0007687!3.00e-10!27;UBERON:0004732!3.24e-10!13;UBERON:0003080!5.81e-10!42;UBERON:0002148!6.47e-09!2;UBERON:0009662!6.47e-09!2;UBERON:0002020!7.59e-09!34;UBERON:0003528!7.59e-09!34;UBERON:0000153!1.48e-08!129;UBERON:0007811!1.48e-08!129;UBERON:0000025!1.16e-07!194;UBERON:0005172!1.26e-07!55;UBERON:0005173!1.26e-07!55;UBERON:0000033!2.88e-07!123;UBERON:0002791!3.07e-07!33;UBERON:0002680!3.41e-07!9;UBERON:0001895!3.41e-07!9;UBERON:0010092!3.41e-07!9;UBERON:0000080!3.62e-07!18;UBERON:0002120!3.62e-07!18;UBERON:0004875!3.62e-07!18;UBERON:0005721!3.62e-07!18;UBERON:0005754!3.62e-07!18;UBERON:0007297!3.62e-07!18;UBERON:0001893!5.45e-07!34;UBERON:0006554!6.02e-07!44;UBERON:0000483!6.55e-07!309;UBERON:0000119!9.01e-07!312;UBERON:0001008!9.43e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.37e-29;1!UBERON:0002046;1.28e-23;5!UBERON:0004909;2.05e-15;2!UBERON:0003124;9.90e-11;3!UBERON:0000920;9.90e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,4.20e-29,1;UBERON:0002046,1.14e-23,5;UBERON:0004117,1.14e-23,5;UBERON:0007689,1.14e-23,5;UBERON:0007123,1.14e-23,5;UBERON:0003091,1.14e-23,5;UBERON:0004909,2.74e-15,2;UBERON:0009722,2.42e-11,11;UBERON:0007690,2.42e-11,11;UBERON:0000920,1.09e-10,3;UBERON:0008814,2.68e-07,18 | |||
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| ||
|short_description=p@chr17:68130483..68130490,+ | |short_description=p@chr17:68130483..68130490,+ | ||
}} | }} |
Latest revision as of 20:24, 25 July 2015
Short description: | p@chr17:68130483..68130490, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:68130483..68130490, + |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 4.20e-29 | 1 |
seromucus secreting cell | 2.74e-15 | 2 |
chorionic membrane mesenchymal stem cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 4.20e-29 | 1 |
thyroid gland | 1.14e-23 | 5 |
pharyngeal pouch | 1.14e-23 | 5 |
thyroid diverticulum | 1.14e-23 | 5 |
pharyngeal pouch 2 | 1.14e-23 | 5 |
thyroid primordium | 1.14e-23 | 5 |
epithelium of gonad | 2.74e-15 | 2 |
entire pharyngeal arch endoderm | 2.42e-11 | 11 |
early pharyngeal endoderm | 2.42e-11 | 11 |
egg chorion | 1.09e-10 | 3 |
pharyngeal arch system | 2.68e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.20e-29 | 1 |
clear cell adenocarcinoma | 2.05e-15 | 2 |