FFCP PHASE1:Hg19::chr17:71064440..71064445,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:71064440..71064445,- | |||
|description=CAGE_peak_at_chr17:71064440..71064445,- | |||
|id=chr17:71064440..71064445,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002550;4.10e-23;1!CL:0000138;7.79e-16;6!CL:0000047;2.90e-12;2!CL:0000153;6.87e-11;9!CL:0000447;6.87e-11;9!CL:1000507;8.64e-10;10!CL:1000494;8.64e-10;10!CL:0000135;1.30e-08;3!CL:0000388;1.30e-08;3!CL:0000499;9.00e-08;28!CL:0000327;6.79e-07;15!CL:1000449;7.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002550,5.13e-23,1;CL:0000058,8.39e-16,6;CL:0000138,8.39e-16,6;CL:0000153,7.22e-11,9;CL:0000447,7.22e-11,9;CL:1000507,8.09e-10,10;CL:1000494,8.09e-10,10;CL:0000135,1.51e-08,3;CL:0000388,1.51e-08,3;CL:0000499,9.65e-08,28;CL:0000327,6.99e-07,15;CL:1000449,7.63e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.19e-23;1!DOID:0060061;1.19e-23;1!DOID:8691;1.19e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.07e-23,1;DOID:0060061,1.07e-23,1;DOID:8691,1.07e-23,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;8.64e-10;10!UBERON:0009773;8.64e-10;10!UBERON:0001231;8.64e-10;10!UBERON:0004810;8.64e-10;10!UBERON:0007846;1.30e-08;3!UBERON:0000043;1.30e-08;3!UBERON:0007845;1.30e-08;3!UBERON:0006555;7.98e-07;15!UBERON:0004819;7.98e-07;15!UBERON:0001285;7.98e-07;15!UBERON:0007684;7.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,8.09e-10,10;UBERON:0007846,1.51e-08,3;UBERON:0000043,1.51e-08,3;UBERON:0007845,1.51e-08,3;UBERON:0004211,7.63e-07,15;UBERON:0009773,7.63e-07,15;UBERON:0001231,7.63e-07,15;UBERON:0001285,7.63e-07,15;UBERON:0007684,7.63e-07,15;UBERON:0004208,7.63e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.92960640696362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,2.50668955317945,0,3.1811437882044,0,0,0,0.614843499851882,0.0654895377488563,0,0,0,0,0,0,0,0,0.79504962946682,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0.709336764396714,0,0,0,0,0,0,0,0,1.17160715916898,1.24864030732128,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,2.92278449306521,1.26661954671451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.227884111694002,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0.964518890790115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,0,3.19979833367888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,1.11598505450025,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:71064440..71064445,- | |||
}} |
Latest revision as of 20:36, 25 July 2015
Short description: | p@chr17:71064440..71064445, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:71064440..71064445, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of the conjuctiva | 5.13e-23 | 1 |
chondroblast | 8.39e-16 | 6 |
chondrocyte | 8.39e-16 | 6 |
GAG secreting cell | 7.22e-11 | 9 |
carbohydrate secreting cell | 7.22e-11 | 9 |
kidney tubule cell | 8.09e-10 | 10 |
nephron tubule epithelial cell | 8.09e-10 | 10 |
fibrocyte | 1.51e-08 | 3 |
tendon cell | 1.51e-08 | 3 |
stromal cell | 9.65e-08 | 28 |
extracellular matrix secreting cell | 6.99e-07 | 15 |
epithelial cell of nephron | 7.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 8.09e-10 | 10 |
dense regular connective tissue | 1.51e-08 | 3 |
tendon | 1.51e-08 | 3 |
regular connective tissue | 1.51e-08 | 3 |
nephron epithelium | 7.63e-07 | 15 |
renal tubule | 7.63e-07 | 15 |
nephron tubule | 7.63e-07 | 15 |
nephron | 7.63e-07 | 15 |
uriniferous tubule | 7.63e-07 | 15 |
nephrogenic mesenchyme | 7.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.07e-23 | 1 |
cutaneous T cell lymphoma | 1.07e-23 | 1 |
mycosis fungoides | 1.07e-23 | 1 |