FFCP PHASE1:Hg19::chr18:29006845..29006854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:29006845..29006854,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr18:29006845..29006854,- | |description=CAGE_peak_at_chr18:29006845..29006854,- | ||
|id=chr18:29006845..29006854,- | |id=chr18:29006845..29006854,- | ||
|ontology_enrichment_celltype=CL:0002623!7.16e-20!3;CL:0000622!2.52e-12!5;CL:0000154!1.99e-10!6;CL:0000150!3.04e-07!9 | |ontology_enrichment_celltype=CL:0002623!7.16e-20!3;CL:0000622!2.52e-12!5;CL:0000154!1.99e-10!6;CL:0000150!3.04e-07!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.23e-66;1!UBERON:0008814;5.96e-34;2!UBERON:0010056;5.96e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!2.99e-35!10;UBERON:0009145!2.99e-35!10;UBERON:0006562!4.58e-32!11;UBERON:0003408!1.10e-22!10;UBERON:0001723!4.88e-20!3;UBERON:0001033!4.88e-20!3;UBERON:0010056!4.88e-20!3;UBERON:0000078!7.73e-20!18;UBERON:0001557!1.27e-18!19;UBERON:0000166!5.14e-17!21;UBERON:0002372!7.46e-16!1;UBERON:0001961!7.46e-16!1;UBERON:0001744!7.46e-16!1;UBERON:0001735!7.46e-16!1;UBERON:0008814!2.58e-15!15;UBERON:0002370!8.02e-15!4;UBERON:0005058!8.02e-15!4;UBERON:0009113!8.02e-15!4;UBERON:0003295!8.02e-15!4;UBERON:0005562!8.02e-15!4;UBERON:0000974!2.90e-13!10;UBERON:0000165!9.04e-13!28;UBERON:0000930!9.04e-13!28;UBERON:0001004!6.94e-12!72;UBERON:0001041!7.36e-11!98;UBERON:0000072!8.06e-11!46;UBERON:0001044!1.99e-10!6;UBERON:0003293!1.99e-10!6;UBERON:0003294!1.99e-10!6;UBERON:0010047!1.99e-10!6;UBERON:0000167!1.99e-10!6;UBERON:0000002!2.29e-10!6;UBERON:0001560!2.29e-10!6;UBERON:0000161!3.25e-10!35;UBERON:0003351!3.34e-10!6;UBERON:0000065!2.36e-09!53;UBERON:0004177!7.11e-09!7;UBERON:0000341!1.50e-08!2;UBERON:0003127!2.15e-08!2;UBERON:0000077!5.92e-08!130;UBERON:0004921!5.92e-08!129;UBERON:0004185!5.92e-08!129;UBERON:0001444!1.97e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.34e-66;1!UBERON:0001961;3.34e-66;1!UBERON:0001744;3.34e-66;1!UBERON:0001042;3.34e-66;1!UBERON:0001735;3.34e-66;1!UBERON:0006562;5.96e-34;2!UBERON:0001043;2.62e-23;3!UBERON:0001723;3.66e-23;3!UBERON:0001033;3.66e-23;3!UBERON:0000165;1.54e-10;28!UBERON:0001555;3.39e-08;54!UBERON:0004921;5.50e-08;33!UBERON:0002465;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.66e-66,1;UBERON:0001961,4.66e-66,1;UBERON:0001744,4.66e-66,1;UBERON:0001735,4.66e-66,1;UBERON:0001042,2.72e-27,10;UBERON:0009145,2.72e-27,10;UBERON:0006562,6.20e-25,11;UBERON:0001043,2.62e-23,3;UBERON:0009143,2.62e-23,3;UBERON:0001723,3.27e-23,3;UBERON:0001033,3.27e-23,3;UBERON:0010056,3.27e-23,3;UBERON:0001557,5.66e-15,19;UBERON:0000166,4.26e-13,22;UBERON:0000165,3.24e-10,29;UBERON:0000930,3.24e-10,29;UBERON:0000161,1.92e-08,36;UBERON:0002465,6.56e-08,10;UBERON:0001041,7.10e-08,87 | |||
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|short_description=p@chr18:29006845..29006854,- | |short_description=p@chr18:29006845..29006854,- | ||
}} | }} |
Latest revision as of 00:19, 26 July 2015
Short description: | p@chr18:29006845..29006854, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:29006845..29006854, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 4.66e-66 | 1 |
mucosa-associated lymphoid tissue | 4.66e-66 | 1 |
lymphoid tissue | 4.66e-66 | 1 |
tonsillar ring | 4.66e-66 | 1 |
chordate pharynx | 2.72e-27 | 10 |
pharyngeal region of foregut | 2.72e-27 | 10 |
pharynx | 6.20e-25 | 11 |
esophagus | 2.62e-23 | 3 |
esophageal region | 2.62e-23 | 3 |
tongue | 3.27e-23 | 3 |
gustatory system | 3.27e-23 | 3 |
future tongue | 3.27e-23 | 3 |
upper respiratory tract | 5.66e-15 | 19 |
oral opening | 4.26e-13 | 22 |
mouth | 3.24e-10 | 29 |
stomodeum | 3.24e-10 | 29 |
orifice | 1.92e-08 | 36 |
lymphoid system | 6.56e-08 | 10 |
foregut | 7.10e-08 | 87 |