FFCP PHASE1:Hg19::chr18:3330733..3330740,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_AK091135_5end | |association_with_transcript=-53bp_to_AK091135_5end | ||
|cluster_id=chr18:3330733..3330740,- | |||
|description=CAGE_peak_1_at_AK091135_5end | |description=CAGE_peak_1_at_AK091135_5end | ||
|id=chr18:3330733..3330740,- | |id=chr18:3330733..3330740,- | ||
|ontology_enrichment_celltype=CL:0000039!3.09e-15!7;CL:0000586!3.09e-15!7;CL:0002076!1.40e-12!43;CL:0000223!1.06e-11!59;CL:0002251!7.30e-11!21;CL:0000066!1.30e-10!254;CL:0002541!8.26e-07!3 | |ontology_enrichment_celltype=CL:0000039!3.09e-15!7;CL:0000586!3.09e-15!7;CL:0002076!1.40e-12!43;CL:0000223!1.06e-11!59;CL:0002251!7.30e-11!21;CL:0000066!1.30e-10!254;CL:0002541!8.26e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.27e-21;3!CL:0000039;2.24e-20;7!CL:0000586;2.24e-20;7!CL:0000167;1.12e-16;1!CL:0000164;1.12e-16;1!CL:0000502;1.12e-16;1!CL:0000172;1.12e-16;1!CL:0000173;1.12e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.67e-21,3;CL:0000039,2.17e-20,7;CL:0000586,2.17e-20,7;CL:0000167,1.21e-16,1;CL:0000164,1.21e-16,1;CL:0000502,1.21e-16,1;CL:0000172,1.21e-16,1;CL:0000173,1.21e-16,1;CL:0002351,1.21e-16,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.12e-16;1!UBERON:0008814;7.21e-09;2!UBERON:0010056;7.21e-09;2 | |||
|ontology_enrichment_disease=DOID:1749!2.02e-10!14;DOID:0050687!8.27e-10!143;DOID:305!1.88e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:0050619;8.19e-17;1!DOID:1357;8.19e-17;1!DOID:4430;1.12e-16;1!DOID:1799;2.08e-16;1!DOID:10165;2.08e-16;1!DOID:1798;2.08e-16;1!DOID:3095;1.73e-11;22!DOID:2994;1.73e-11;22!DOID:1749;1.47e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.86e-17,1;DOID:1357,8.86e-17,1;DOID:4430,1.21e-16,1;DOID:1799,2.63e-16,1;DOID:10165,2.63e-16,1;DOID:1798,2.63e-16,1;DOID:3095,1.73e-11,22;DOID:2994,1.73e-11,22;DOID:1749,1.47e-10,14;DOID:0050687,7.60e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.39e-19!12;UBERON:0003729!3.94e-13!5;UBERON:0000161!1.88e-11!35;UBERON:0000166!5.58e-11!21;UBERON:0004119!1.49e-10!169;UBERON:0000925!1.49e-10!169;UBERON:0006595!1.49e-10!169;UBERON:0000165!6.34e-10!28;UBERON:0000930!6.34e-10!28;UBERON:0003343!6.66e-10!4;UBERON:0004785!6.66e-10!4;UBERON:0001004!7.07e-08!72;UBERON:0000365!7.73e-08!5;UBERON:0003350!2.01e-07!5;UBERON:0001007!4.13e-07!155;UBERON:0001555!4.13e-07!155;UBERON:0007026!4.13e-07!155;UBERON:0000476!8.26e-07!3;UBERON:0000920!8.26e-07!3 | |ontology_enrichment_uberon=UBERON:0000344!1.39e-19!12;UBERON:0003729!3.94e-13!5;UBERON:0000161!1.88e-11!35;UBERON:0000166!5.58e-11!21;UBERON:0004119!1.49e-10!169;UBERON:0000925!1.49e-10!169;UBERON:0006595!1.49e-10!169;UBERON:0000165!6.34e-10!28;UBERON:0000930!6.34e-10!28;UBERON:0003343!6.66e-10!4;UBERON:0004785!6.66e-10!4;UBERON:0001004!7.07e-08!72;UBERON:0000365!7.73e-08!5;UBERON:0003350!2.01e-07!5;UBERON:0001007!4.13e-07!155;UBERON:0001555!4.13e-07!155;UBERON:0007026!4.13e-07!155;UBERON:0000476!8.26e-07!3;UBERON:0000920!8.26e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.27e-21;3!UBERON:0000920;3.27e-21;3!UBERON:0001764;8.19e-17;1!UBERON:0001825;8.19e-17;1!UBERON:0005631;5.11e-07;10!UBERON:0000158;5.11e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.67e-21,3;UBERON:0001764,8.86e-17,1;UBERON:0001825,8.86e-17,1;UBERON:0003124,1.09e-09,7 | |||
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| ||
|short_description=p1@AK091135 | |short_description=p1@AK091135 | ||
}} | }} |
Latest revision as of 00:36, 26 July 2015
Short description: | p1@AK091135 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK091135_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_AK091135_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.67e-21 | 3 |
germ line cell | 2.17e-20 | 7 |
germ cell | 2.17e-20 | 7 |
peptide hormone secreting cell | 1.21e-16 | 1 |
enteroendocrine cell | 1.21e-16 | 1 |
type D enteroendocrine cell | 1.21e-16 | 1 |
somatostatin secreting cell | 1.21e-16 | 1 |
pancreatic D cell | 1.21e-16 | 1 |
progenitor cell of endocrine pancreas | 1.21e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.67e-21 | 3 |
maxillary sinus | 8.86e-17 | 1 |
paranasal sinus | 8.86e-17 | 1 |
chorion | 1.09e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.86e-17 | 1 |
maxillary sinus cancer | 8.86e-17 | 1 |
somatostatinoma | 1.21e-16 | 1 |
islet cell tumor | 2.63e-16 | 1 |
endocrine pancreas cancer | 2.63e-16 | 1 |
pancreatic endocrine carcinoma | 2.63e-16 | 1 |
germ cell and embryonal cancer | 1.73e-11 | 22 |
germ cell cancer | 1.73e-11 | 22 |
squamous cell carcinoma | 1.47e-10 | 14 |
cell type cancer | 7.60e-08 | 143 |