FFCP PHASE1:Hg19::chr18:43330153..43330154,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:43330153..43330154,+ | |||
|description=CAGE_peak_at_chr18:43330153..43330154,+ | |description=CAGE_peak_at_chr18:43330153..43330154,+ | ||
|id=chr18:43330153..43330154,+ | |id=chr18:43330153..43330154,+ | ||
|ontology_enrichment_celltype=CL:1000306!6.88e-12!4;CL:0002547!6.88e-12!4;CL:0000135!3.61e-10!3;CL:0000386!3.61e-10!3;CL:0000388!3.61e-10!3;CL:0002564!2.12e-09!3 | |ontology_enrichment_celltype=CL:1000306!6.88e-12!4;CL:0002547!6.88e-12!4;CL:0000135!3.61e-10!3;CL:0000386!3.61e-10!3;CL:0000388!3.61e-10!3;CL:0002564!2.12e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000135;7.01e-25;3!CL:0000388;7.01e-25;3!CL:0002379;8.94e-20;1!CL:0000764;2.48e-10;2!CL:0000558;2.48e-10;2!CL:0002564;2.63e-07;3!CL:0002582;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,4.87e-25,3;CL:0000388,4.87e-25,3;CL:0002379,8.95e-20,1;CL:0000764,2.49e-10,2;CL:0000765,2.49e-10,2;CL:0000050,2.49e-10,2;CL:0000038,2.49e-10,2;CL:0000558,2.49e-10,2;CL:0000547,2.49e-10,2;CL:0000549,2.49e-10,2;CL:0000550,2.49e-10,2;CL:0000552,2.49e-10,2;CL:0002582,2.97e-07,3;CL:0002564,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;8.94e-20;1!DOID:3565;8.94e-20;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,8.95e-20,1;DOID:3565,8.95e-20,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-12!57;UBERON:0005068!1.17e-12!57;UBERON:0006241!1.17e-12!57;UBERON:0007135!1.17e-12!57;UBERON:0000415!6.88e-12!4;UBERON:0007240!6.88e-12!4;UBERON:0005742!6.88e-12!4;UBERON:0005734!6.88e-12!4;UBERON:0004664!6.88e-12!4;UBERON:0004663!6.88e-12!4;UBERON:0007023!1.23e-11!115;UBERON:0002780!1.70e-11!41;UBERON:0001890!1.70e-11!41;UBERON:0006240!1.70e-11!41;UBERON:0003080!3.83e-11!42;UBERON:0002616!1.30e-10!59;UBERON:0000043!3.61e-10!3;UBERON:0002771!1.55e-09!3;UBERON:0002242!2.12e-09!3;UBERON:0003068!2.12e-09!3;UBERON:0002328!2.12e-09!3;UBERON:0004880!2.12e-09!3;UBERON:0000955!2.36e-09!69;UBERON:0006238!2.36e-09!69;UBERON:0002791!3.98e-09!33;UBERON:0002020!6.73e-09!34;UBERON:0003528!6.73e-09!34;UBERON:0001893!8.60e-09!34;UBERON:0001017!3.16e-08!82;UBERON:0005743!1.21e-07!86;UBERON:0002420!2.11e-07!9;UBERON:0007245!2.11e-07!9;UBERON:0010009!2.11e-07!9;UBERON:0010011!2.11e-07!9;UBERON:0000454!2.11e-07!9;UBERON:0002308!2.40e-07!9;UBERON:0000125!2.40e-07!9;UBERON:0001897!3.90e-07!2;UBERON:0004111!6.14e-07!241;UBERON:0003075!6.38e-07!86;UBERON:0007284!6.38e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.01e-25;3!UBERON:0000043;7.01e-25;3!UBERON:0007845;7.01e-25;3!UBERON:0002771;2.48e-10;2!UBERON:0001954;2.48e-10;2!UBERON:0003022;2.48e-10;2!UBERON:0002421;2.48e-10;2!UBERON:0002600;2.48e-10;2!UBERON:0002242;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.87e-25,3;UBERON:0000043,4.87e-25,3;UBERON:0007845,4.87e-25,3;UBERON:0001954,1.72e-10,2;UBERON:0003022,1.72e-10,2;UBERON:0002421,1.72e-10,2;UBERON:0002600,1.72e-10,2;UBERON:0002771,1.89e-10,2;UBERON:0002242,3.35e-07,3;UBERON:0003068,3.35e-07,3;UBERON:0002328,3.35e-07,3;UBERON:0004880,3.35e-07,3 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3071772551245,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0.845086807596724,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,2.06751060186264,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90684768556206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70836770862748,0.250381861413,0,0.443716206147409,0.18628920882415,0,0,0,0,4.23478475456709,0,0,0,0,0,0.568209015825267,0.754703705257725,0,0,0.453692771289717,0,0.147855149989634,0,0,0.155262956876259,1.24411862352257,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,1.48798007266701,1.38652688589425,0.865253124247578,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr18:43330153..43330154,+ | |short_description=p@chr18:43330153..43330154,+ | ||
}} | }} |
Latest revision as of 00:58, 26 July 2015
Short description: | p@chr18:43330153..43330154, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:43330153..43330154, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 4.87e-25 | 3 |
tendon cell | 4.87e-25 | 3 |
meningothelial cell | 8.95e-20 | 1 |
erythroid lineage cell | 2.49e-10 | 2 |
erythroblast | 2.49e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 2.49e-10 | 2 |
erythroid progenitor cell | 2.49e-10 | 2 |
reticulocyte | 2.49e-10 | 2 |
proerythroblast | 2.49e-10 | 2 |
basophilic erythroblast | 2.49e-10 | 2 |
polychromatophilic erythroblast | 2.49e-10 | 2 |
orthochromatic erythroblast | 2.49e-10 | 2 |
visceral preadipocyte | 2.97e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.87e-25 | 3 |
tendon | 4.87e-25 | 3 |
regular connective tissue | 4.87e-25 | 3 |
Ammon's horn | 1.72e-10 | 2 |
lobe parts of cerebral cortex | 1.72e-10 | 2 |
hippocampal formation | 1.72e-10 | 2 |
limbic lobe | 1.72e-10 | 2 |
middle temporal gyrus | 1.89e-10 | 2 |
nucleus pulposus | 3.35e-07 | 3 |
axial mesoderm | 3.35e-07 | 3 |
notochord | 3.35e-07 | 3 |
chordamesoderm | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 8.95e-20 | 1 |
meningioma | 8.95e-20 | 1 |