FFCP PHASE1:Hg19::chr18:56563742..56563783,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:56563742..56563783,+ | |||
|description=CAGE_peak_at_chr18:56563742..56563783,+ | |description=CAGE_peak_at_chr18:56563742..56563783,+ | ||
|id=chr18:56563742..56563783,+ | |id=chr18:56563742..56563783,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.05e-30!24;CL:0000826!1.05e-30!24;CL:0000236!1.36e-23!14;CL:0000542!1.38e-17!53;CL:0000051!1.38e-17!53;CL:0000838!2.30e-16!52;CL:0002541!3.61e-07!3 | |ontology_enrichment_celltype=CL:0000945!1.05e-30!24;CL:0000826!1.05e-30!24;CL:0000236!1.36e-23!14;CL:0000542!1.38e-17!53;CL:0000051!1.38e-17!53;CL:0000838!2.30e-16!52;CL:0002541!3.61e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.71e-61;24!CL:0000236;3.61e-57;13!CL:0000542;1.66e-25;53!CL:0002541;3.33e-11;3!CL:0000039;1.34e-10;7!CL:0000586;1.34e-10;7!CL:0000785;2.93e-09;1!CL:0000819;2.93e-09;1!CL:0002537;7.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.72e-61,24;CL:0000826,9.72e-61,24;CL:0000236,5.11e-53,14;CL:0000542,1.59e-34,53;CL:0000051,1.59e-34,53;CL:0000838,6.51e-31,52;CL:0002087,3.53e-14,115;CL:0002031,1.04e-11,120;CL:0000738,1.50e-11,136;CL:0002541,3.79e-11,3;CL:0000039,1.34e-10,7;CL:0000586,1.34e-10,7;CL:0002032,2.62e-09,161;CL:0000837,2.62e-09,161;CL:0000819,3.31e-09,1;CL:0000037,8.44e-09,168;CL:0000988,3.32e-08,177;CL:0002537,8.10e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;1.66e-25;53!UBERON:0001045;9.91e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!5.70e-10!10 | |ontology_enrichment_disease=DOID:0060058!5.70e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.74e-20;10!DOID:4960;1.89e-09;1!DOID:0070004;1.89e-09;1!DOID:1799;2.93e-09;1!DOID:10165;2.93e-09;1!DOID:0060073;2.93e-09;1!DOID:8675;2.93e-09;1!DOID:1798;2.93e-09;1!DOID:12603;9.91e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.20e-20,10;DOID:4960,1.89e-09,1;DOID:0070004,1.89e-09,1;DOID:1799,3.05e-09,1;DOID:10165,3.05e-09,1;DOID:1798,3.05e-09,1;DOID:0060073,3.31e-09,1;DOID:8675,3.31e-09,1;DOID:12603,8.49e-09,1;DOID:2531,7.93e-07,51;DOID:0060083,7.93e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-11!115;UBERON:0005631!5.82e-08!14;UBERON:0000158!5.82e-08!14;UBERON:0000476!3.61e-07!3;UBERON:0000920!3.61e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!4.16e-11!115;UBERON:0005631!5.82e-08!14;UBERON:0000158!5.82e-08!14;UBERON:0000476!3.61e-07!3;UBERON:0000920!3.61e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.86e-12;10!UBERON:0000158;2.86e-12;10!UBERON:0003124;3.33e-11;3!UBERON:0000920;3.33e-11;3!UBERON:0001154;9.91e-09;1!UBERON:0001153;9.91e-09;1!UBERON:0009854;9.91e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.79e-11,3;UBERON:0005631,8.80e-09,14;UBERON:0000158,8.80e-09,14;UBERON:0001154,9.17e-09,1;UBERON:0001153,9.17e-09,1;UBERON:0001045,9.17e-09,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,9.29606406963619,10.9470309015315,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.18455444504853,0.889509253863555,2.98711155796555,2.80277190925209,2.87376219977242,5.2883589822789,0.954053754535364,3.98449078376614,3.52342313622563,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,1.67222857613147,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69557443214062,0,1.19372242368845,0.296964680832639,1.22864280839693,0,0.140669416410513,0,0,0,0.19924798825107,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,2.3056390438806,4.93667044253747,4.99777910841237,3.19001159731919,0.549585560411174,2.66517388009317,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,4.01400536274465,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0,0,0,0.674921674654501,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,2.76656284657122,5.11528913199763,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,9.47182388134486,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45241380618418,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.0657727735628491,0.118193840883968,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0.50141507858475,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0.942928742204225,0.143444410785353,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,9.29606406963619,10.9470309015315,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.18455444504853,0.889509253863555,2.98711155796555,2.80277190925209,2.87376219977242,5.2883589822789,0.954053754535364,3.98449078376614,3.52342313622563,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,1.67222857613147,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69557443214062,0,1.19372242368845,0.296964680832639,1.22864280839693,0,0.140669416410513,0,0,0,0.19924798825107,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,2.3056390438806,4.93667044253747,4.99777910841237,3.19001159731919,0.549585560411174,2.66517388009317,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,4.01400536274465,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0,0,0,0.674921674654501,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,2.76656284657122,5.11528913199763,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,9.47182388134486,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45241380618418,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.0657727735628491,0.118193840883968,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0.50141507858475,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0.942928742204225,0.143444410785353,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p@chr18:56563742..56563783,+ | |short_description=p@chr18:56563742..56563783,+ | ||
}} | }} |
Latest revision as of 01:38, 26 July 2015
Short description: | p@chr18:56563742..56563783, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:56563742..56563783, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.72e-61 | 24 |
pro-B cell | 9.72e-61 | 24 |
B cell | 5.11e-53 | 14 |
lymphocyte | 1.59e-34 | 53 |
common lymphoid progenitor | 1.59e-34 | 53 |
lymphoid lineage restricted progenitor cell | 6.51e-31 | 52 |
nongranular leukocyte | 3.53e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.04e-11 | 120 |
leukocyte | 1.50e-11 | 136 |
chorionic membrane mesenchymal stem cell | 3.79e-11 | 3 |
germ line cell | 1.34e-10 | 7 |
germ cell | 1.34e-10 | 7 |
hematopoietic oligopotent progenitor cell | 2.62e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.62e-09 | 161 |
B-1 B cell | 3.31e-09 | 1 |
hematopoietic stem cell | 8.44e-09 | 168 |
hematopoietic cell | 3.32e-08 | 177 |
amnion mesenchymal stem cell | 8.10e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.79e-11 | 3 |
extraembryonic membrane | 8.80e-09 | 14 |
membranous layer | 8.80e-09 | 14 |
vermiform appendix | 9.17e-09 | 1 |
caecum | 9.17e-09 | 1 |
midgut | 9.17e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.20e-20 | 10 |
bone marrow cancer | 1.89e-09 | 1 |
myeloma | 1.89e-09 | 1 |
islet cell tumor | 3.05e-09 | 1 |
endocrine pancreas cancer | 3.05e-09 | 1 |
pancreatic endocrine carcinoma | 3.05e-09 | 1 |
lymphatic system cancer | 3.31e-09 | 1 |
lymphosarcoma | 3.31e-09 | 1 |
acute leukemia | 8.49e-09 | 1 |
hematologic cancer | 7.93e-07 | 51 |
immune system cancer | 7.93e-07 | 51 |