FFCP PHASE1:Hg19::chr18:77044132..77044175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:77044132..77044175,+ | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_at_chr18:77044132..77044175,+ | |description=CAGE_peak_at_chr18:77044132..77044175,+ | ||
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|ontology_enrichment_celltype=CL:0000080!5.67e-12!6;CL:0002568!1.78e-08!1 | |ontology_enrichment_celltype=CL:0000080!5.67e-12!6;CL:0002568!1.78e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.49e-79;5!CL:0002321;1.82e-27;15 | |ontology_enrichment_celltype_v019=CL:0000333;3.49e-79;5!CL:0002321;1.82e-27;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000221;1.93e-07;72 | |ontology_enrichment_development_v019=CL:0000221;1.93e-07;72 | ||
|ontology_enrichment_disease=DOID:171!1.39e-12!10;DOID:169!3.62e-12!6 | |ontology_enrichment_disease=DOID:171!1.39e-12!10;DOID:169!3.62e-12!6 | ||
|ontology_enrichment_disease_v019=DOID:169;2.83e-66;6!DOID:171;2.00e-40;10!DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22 | |ontology_enrichment_disease_v019=DOID:169;2.83e-66;6!DOID:171;2.00e-40;10!DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22 | ||
|ontology_enrichment_disease_v019_2=DOID:169,2.83e-66,6;DOID:171,2.00e-40,10;DOID:3095,3.41e-19,22;DOID:2994,3.41e-19,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.70e-14!5;UBERON:0002410!1.70e-14!5;UBERON:0002331!3.55e-12!10;UBERON:0000358!3.55e-12!10;UBERON:0000307!3.55e-12!10;UBERON:0000091!3.55e-12!10;UBERON:0000087!3.55e-12!10;UBERON:0007806!3.55e-12!10;UBERON:0008780!3.55e-12!10;UBERON:0005728!3.55e-12!10;UBERON:0002146!7.75e-09!1;UBERON:0005623!7.75e-09!1;UBERON:0002363!1.91e-08!1;UBERON:0007647!1.91e-08!1;UBERON:0010115!1.91e-08!1;UBERON:0000010!2.86e-08!8;UBERON:0002308!7.54e-08!9;UBERON:0000125!7.54e-08!9 | |ontology_enrichment_uberon=UBERON:0000013!1.70e-14!5;UBERON:0002410!1.70e-14!5;UBERON:0002331!3.55e-12!10;UBERON:0000358!3.55e-12!10;UBERON:0000307!3.55e-12!10;UBERON:0000091!3.55e-12!10;UBERON:0000087!3.55e-12!10;UBERON:0007806!3.55e-12!10;UBERON:0008780!3.55e-12!10;UBERON:0005728!3.55e-12!10;UBERON:0002146!7.75e-09!1;UBERON:0005623!7.75e-09!1;UBERON:0002363!1.91e-08!1;UBERON:0007647!1.91e-08!1;UBERON:0010115!1.91e-08!1;UBERON:0000010!2.86e-08!8;UBERON:0002308!7.54e-08!9;UBERON:0000125!7.54e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.49e-79;5!UBERON:0002410;3.49e-79;5!UBERON:0000010;9.75e-45;8 | |ontology_enrichment_uberon_v019=UBERON:0000013;3.49e-79;5!UBERON:0002410;3.49e-79;5!UBERON:0000010;9.75e-45;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.49e-79,5;UBERON:0002410,3.49e-79,5;UBERON:0000010,9.75e-45,8 | |||
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|short_description=p@chr18:77044132..77044175,+ | |short_description=p@chr18:77044132..77044175,+ | ||
}} | }} |
Latest revision as of 02:28, 26 July 2015
Short description: | p@chr18:77044132..77044175, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:77044132..77044175, + |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.49e-79 | 5 |
autonomic nervous system | 3.49e-79 | 5 |
peripheral nervous system | 9.75e-45 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.83e-66 | 6 |
neuroectodermal tumor | 2.00e-40 | 10 |
germ cell and embryonal cancer | 3.41e-19 | 22 |
germ cell cancer | 3.41e-19 | 22 |