FFCP PHASE1:Hg19::chr19:10687907..10687918,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:10687907..10687918,- | |||
|coexpression_cluster_id=C231 | |coexpression_cluster_id=C231 | ||
|description=CAGE_peak_at_chr19:10687907..10687918,- | |description=CAGE_peak_at_chr19:10687907..10687918,- | ||
|id=chr19:10687907..10687918,- | |id=chr19:10687907..10687918,- | ||
|ontology_enrichment_celltype=CL:0000077;3.51e-29;19!CL:0002097;1.96e-12;2!CL:0000174;1.00e-08;3!CL:0000213;1.96e-07;58!CL:0000215;1.96e-07;58 | |ontology_enrichment_celltype=CL:0000077!8.31e-20!19;CL:1000507!6.61e-10!12;CL:1000494!6.61e-10!12;CL:0000066!2.49e-09!254;CL:1000497!1.71e-08!18;CL:0002518!1.71e-08!18;CL:1000449!3.08e-07!16 | ||
| | |ontology_enrichment_celltype_v019=CL:0000077;3.51e-29;19!CL:0002097;1.96e-12;2!CL:0000174;1.00e-08;3!CL:0000213;1.96e-07;58!CL:0000215;1.96e-07;58 | ||
|ontology_enrichment_disease=DOID:2394;3.34e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0000077,3.03e-29,19;CL:0002097,1.85e-12,2;CL:0000213,9.68e-10,58;CL:0000215,9.68e-10,58;CL:0000076,5.60e-09,63;CL:0000174,9.66e-09,3 | ||
|ontology_enrichment_uberon=UBERON:0002369;1.00e-08;3!UBERON:0001235;1.00e-08;3!UBERON:0006858;1.00e-08;3 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:193!2.14e-09!29;DOID:120!2.59e-08!27;DOID:2394!3.66e-08!14;DOID:162!3.74e-08!235;DOID:14566!8.05e-08!239;DOID:4468!2.23e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.34e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.34e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.50e-12!9;UBERON:0009773!6.61e-10!12;UBERON:0001231!6.61e-10!12;UBERON:0004810!6.61e-10!12;UBERON:0002113!2.09e-08!27;UBERON:0003918!2.09e-08!27;UBERON:0005095!2.09e-08!27;UBERON:0007687!2.09e-08!27;UBERON:0001557!1.90e-07!19;UBERON:0001851!2.75e-07!16;UBERON:0005172!2.96e-07!55;UBERON:0005173!2.96e-07!55;UBERON:0004211!3.08e-07!16;UBERON:0001285!3.08e-07!16;UBERON:0007684!3.08e-07!16;UBERON:0003220!3.08e-07!16;UBERON:0004208!3.08e-07!16;UBERON:0000489!7.82e-07!32;UBERON:0006555!9.11e-07!17;UBERON:0005103!9.11e-07!17;UBERON:0000083!9.11e-07!17;UBERON:0009201!9.11e-07!17;UBERON:0004819!9.11e-07!17;UBERON:0006553!9.11e-07!17;UBERON:0003074!9.11e-07!17;UBERON:0003060!9.11e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.00e-08;3!UBERON:0001235;1.00e-08;3!UBERON:0006858;1.00e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.66e-09,3;UBERON:0001235,9.66e-09,3;UBERON:0006858,9.66e-09,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.441175890929576,0,0,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,4.22015127883421,0,4.39881161201051,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0.812839312631559,0.501689773854853,0,0.831076008928724,0.447749509444357,0,0,0.769350375349168,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,1.5652351854352,0.601030435988874,1.14241563650639,0.406870733204662,0,0.429642228169954,0,0,0,0,0,0,0,2.57329909649911,0.782982875895635,0.226705925512272,0.231522474323834,0,0,0,0.657852148736121,0,1.73622634443823,1.18259708457151,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:10687907..10687918,- | |short_description=p@chr19:10687907..10687918,- | ||
}} | }} |
Latest revision as of 03:11, 26 July 2015
Short description: | p@chr19:10687907..10687918, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10687907..10687918, - |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.03e-29 | 19 |
cortical cell of adrenal gland | 1.85e-12 | 2 |
lining cell | 9.68e-10 | 58 |
barrier cell | 9.68e-10 | 58 |
squamous epithelial cell | 5.60e-09 | 63 |
steroid hormone secreting cell | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 9.66e-09 | 3 |
adrenal cortex | 9.66e-09 | 3 |
adrenal/interrenal gland | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.34e-07 | 14 |