FFCP PHASE1:Hg19::chr19:28198206..28198222,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:28198206..28198222,+ | |||
|coexpression_cluster_id=C77 | |coexpression_cluster_id=C77 | ||
|description=CAGE_peak_at_chr19:28198206..28198222,+ | |description=CAGE_peak_at_chr19:28198206..28198222,+ | ||
|id=chr19:28198206..28198222,+ | |id=chr19:28198206..28198222,+ | ||
|ontology_enrichment_celltype=CL:1000415!1.54e-15!2;CL:0000062!2.07e-11!11;CL:0000375!2.07e-11!11;CL:0000335!2.07e-11!11;CL:0002231!8.99e-11!3;CL:0000077!6.97e-07!19 | |ontology_enrichment_celltype=CL:1000415!1.54e-15!2;CL:0000062!2.07e-11!11;CL:0000375!2.07e-11!11;CL:0000335!2.07e-11!11;CL:0002231!8.99e-11!3;CL:0000077!6.97e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:1000415;7.04e-34;2!CL:0000062;2.66e-30;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,7.05e-34,2;CL:0000062,4.86e-25,11;CL:0000375,4.86e-25,11;CL:0000335,4.86e-25,11 | |||
|ontology_enrichment_development_v019=CL:0000335;4.86e-25;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002110!8.17e-11!3;UBERON:0006242!8.17e-11!3 | |ontology_enrichment_uberon=UBERON:0002110!8.17e-11!3;UBERON:0006242!8.17e-11!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;4.09e-23;3!UBERON:0001474;8.40e-16;18!UBERON:0004765;2.63e-11;26!UBERON:0002294;9.89e-11;7!UBERON:0001173;9.89e-11;7!UBERON:0001434;1.20e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,4.09e-23,3;UBERON:0006242,4.09e-23,3;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9 | |||
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|short_description=p@chr19:28198206..28198222,+ | |short_description=p@chr19:28198206..28198222,+ | ||
}} | }} |
Latest revision as of 05:59, 26 July 2015
Short description: | p@chr19:28198206..28198222, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:28198206..28198222, + |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 7.05e-34 | 2 |
osteoblast | 4.86e-25 | 11 |
osteoprogenitor cell | 4.86e-25 | 11 |
mesenchyme condensation cell | 4.86e-25 | 11 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 4.09e-23 | 3 |
gall bladder primordium | 4.09e-23 | 3 |
biliary system | 1.21e-08 | 9 |
biliary tree | 1.21e-08 | 9 |
biliary bud | 1.21e-08 | 9 |