FFCP PHASE1:Hg19::chr19:30716539..30716546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:30716539..30716546,+ | |||
|description=CAGE_peak_at_chr19:30716539..30716546,+ | |description=CAGE_peak_at_chr19:30716539..30716546,+ | ||
|id=chr19:30716539..30716546,+ | |id=chr19:30716539..30716546,+ | ||
|ontology_enrichment_celltype=CL:0000333!1.32e-12!41;CL:0000133!1.53e-09!59;CL:0000095!1.83e-09!17;CL:0000123!1.83e-09!17;CL:0000128!2.38e-09!7;CL:0000126!2.38e-09!7;CL:0000127!2.38e-09!7;CL:0002453!2.38e-09!7;CL:0000242!5.11e-09!2;CL:0000221!1.78e-07!71 | |ontology_enrichment_celltype=CL:0000333!1.32e-12!41;CL:0000133!1.53e-09!59;CL:0000095!1.83e-09!17;CL:0000123!1.83e-09!17;CL:0000128!2.38e-09!7;CL:0000126!2.38e-09!7;CL:0000127!2.38e-09!7;CL:0002453!2.38e-09!7;CL:0000242!5.11e-09!2;CL:0000221!1.78e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.39e-66;3!CL:0000067;2.39e-66;3!CL:0005012;2.39e-66;3!CL:0002304;2.39e-66;3!CL:0000710;2.29e-11;20!CL:0000075;8.32e-09;27!CL:0002077;2.32e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.39e-66,3;CL:0000067,2.39e-66,3;CL:0005012,2.39e-66,3;CL:0002304,2.39e-66,3;CL:0000710,2.29e-11,20;CL:0000075,8.32e-09,27;CL:0002077,2.74e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.17e-09!10;DOID:1909!3.87e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.66e-19!57;UBERON:0005068!1.66e-19!57;UBERON:0006241!1.66e-19!57;UBERON:0007135!1.66e-19!57;UBERON:0000924!4.89e-19!173;UBERON:0006601!4.89e-19!173;UBERON:0000955!5.29e-19!69;UBERON:0006238!5.29e-19!69;UBERON:0000073!5.89e-19!94;UBERON:0001016!5.89e-19!94;UBERON:0002346!8.62e-19!90;UBERON:0001017!5.41e-17!82;UBERON:0004121!5.88e-17!169;UBERON:0002616!1.40e-16!59;UBERON:0003075!2.44e-16!86;UBERON:0007284!2.44e-16!86;UBERON:0005743!5.65e-16!86;UBERON:0001894!1.25e-14!7;UBERON:0006222!1.25e-14!7;UBERON:0000153!9.10e-14!129;UBERON:0007811!9.10e-14!129;UBERON:0000033!2.30e-13!123;UBERON:0002780!7.88e-13!41;UBERON:0001890!7.88e-13!41;UBERON:0006240!7.88e-13!41;UBERON:0003056!1.63e-12!61;UBERON:0003080!1.83e-12!42;UBERON:0000007!1.95e-09!2;UBERON:0001897!2.92e-09!2;UBERON:0003076!1.09e-08!15;UBERON:0003057!1.09e-08!15;UBERON:0007023!2.28e-08!115;UBERON:0004733!8.49e-08!12;UBERON:0002028!8.49e-08!12;UBERON:0007277!8.49e-08!12;UBERON:0000013!9.36e-08!5;UBERON:0002410!9.36e-08!5;UBERON:0000475!3.38e-07!365;UBERON:0004732!3.58e-07!13;UBERON:0002680!4.57e-07!9;UBERON:0001895!4.57e-07!9;UBERON:0010092!4.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.39e-66;3!UBERON:0001775;2.39e-66;3!UBERON:0000488;3.10e-50;4!UBERON:0002203;4.27e-34;6!UBERON:0001768;4.27e-34;6!UBERON:0002200;4.27e-34;6!UBERON:0007625;2.25e-19;11!UBERON:0006876;2.25e-19;11!UBERON:0001801;1.43e-15;14!UBERON:0000019;6.95e-12;19!UBERON:0000047;6.95e-12;19!UBERON:0004088;6.95e-12;19!UBERON:0010230;6.95e-12;19!UBERON:0000970;2.29e-11;20!UBERON:0002104;6.74e-11;21!UBERON:0001456;6.74e-11;21!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24!UBERON:0010371;4.53e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.39e-66,3;UBERON:0001775,2.39e-66,3;UBERON:0000488,3.10e-50,4;UBERON:0002203,4.27e-34,6;UBERON:0001768,4.27e-34,6;UBERON:0002200,4.27e-34,6;UBERON:0007625,2.25e-19,11;UBERON:0006876,2.25e-19,11;UBERON:0001801,1.43e-15,14;UBERON:0000019,2.29e-11,20;UBERON:0000047,2.29e-11,20;UBERON:0010312,2.29e-11,20;UBERON:0004088,2.29e-11,20;UBERON:0010230,2.29e-11,20;UBERON:0003072,2.29e-11,20;UBERON:0004128,2.29e-11,20;UBERON:0003071,2.29e-11,20;UBERON:0000970,6.74e-11,21;UBERON:0002104,6.74e-11,21;UBERON:0001456,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0005085,7.41e-08,31 | |||
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| ||
|short_description=p@chr19:30716539..30716546,+ | |short_description=p@chr19:30716539..30716546,+ | ||
}} | }} |
Latest revision as of 06:08, 26 July 2015
Short description: | p@chr19:30716539..30716546, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:30716539..30716546, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.39e-66 | 3 |
ciliated epithelial cell | 2.39e-66 | 3 |
multi-ciliated epithelial cell | 2.39e-66 | 3 |
non-pigmented ciliary epithelial cell | 2.39e-66 | 3 |
neurecto-epithelial cell | 2.29e-11 | 20 |
columnar/cuboidal epithelial cell | 8.32e-09 | 27 |
ecto-epithelial cell | 2.74e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.39e-66 | 3 |
ciliary body | 2.39e-66 | 3 |
atypical epithelium | 3.10e-50 | 4 |
vasculature of eye | 4.27e-34 | 6 |
uvea | 4.27e-34 | 6 |
vasculature of head | 4.27e-34 | 6 |
pigment epithelium of eye | 2.25e-19 | 11 |
vasculature of organ | 2.25e-19 | 11 |
anterior segment of eyeball | 1.43e-15 | 14 |
camera-type eye | 2.29e-11 | 20 |
simple eye | 2.29e-11 | 20 |
immature eye | 2.29e-11 | 20 |
ocular region | 2.29e-11 | 20 |
eyeball of camera-type eye | 2.29e-11 | 20 |
optic cup | 2.29e-11 | 20 |
optic vesicle | 2.29e-11 | 20 |
eye primordium | 2.29e-11 | 20 |
eye | 6.74e-11 | 21 |
visual system | 6.74e-11 | 21 |
face | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
ectodermal placode | 7.41e-08 | 31 |