FFCP PHASE1:Hg19::chr19:36640447..36640459,+: Difference between revisions
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|id=chr19:36640447..36640459,+
|short_description=p@chr19:36640447..36640459,+
|description=CAGE_peak_at_chr19:36640447..36640459,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:36640447..36640459,+ | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_at_chr19:36640447..36640459,+ | |||
|id=chr19:36640447..36640459,+ | |||
|ontology_enrichment_celltype=CL:0002623!2.77e-14!3;CL:0002550!2.68e-11!1;CL:0000622!6.19e-09!5;CL:0000154!1.38e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.40e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.40e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0001723!1.73e-14!3;UBERON:0001033!1.73e-14!3;UBERON:0010056!1.73e-14!3;UBERON:0000078!5.82e-14!18;UBERON:0000166!5.94e-12!21;UBERON:0002372!9.57e-12!1;UBERON:0001961!9.57e-12!1;UBERON:0001744!9.57e-12!1;UBERON:0001735!9.57e-12!1;UBERON:0000161!5.35e-10!35;UBERON:0001042!9.01e-10!10;UBERON:0009145!9.01e-10!10;UBERON:0000165!6.24e-09!28;UBERON:0000930!6.24e-09!28;UBERON:0006562!6.27e-09!11;UBERON:0001044!1.38e-07!6;UBERON:0003293!1.38e-07!6;UBERON:0003294!1.38e-07!6;UBERON:0010047!1.38e-07!6;UBERON:0000167!1.38e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.34e-66;1!UBERON:0001961;3.34e-66;1!UBERON:0001744;3.34e-66;1!UBERON:0001042;3.34e-66;1!UBERON:0001735;3.34e-66;1!UBERON:0006562;5.96e-34;2!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0002465;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.39e-66,1;UBERON:0001961,2.39e-66,1;UBERON:0001744,2.39e-66,1;UBERON:0001735,2.39e-66,1;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0002465,6.13e-08,10;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11 | |||
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|short_description=p@chr19:36640447..36640459,+ | |||
}} | }} |
Latest revision as of 07:03, 26 July 2015
Short description: | p@chr19:36640447..36640459, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36640447..36640459, + |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 2.39e-66 | 1 |
mucosa-associated lymphoid tissue | 2.39e-66 | 1 |
lymphoid tissue | 2.39e-66 | 1 |
tonsillar ring | 2.39e-66 | 1 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
lymphoid system | 6.13e-08 | 10 |
chordate pharynx | 6.13e-08 | 10 |
pharyngeal region of foregut | 6.13e-08 | 10 |
pharynx | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.40e-14 | 5 |