FFCP PHASE1:Hg19::chr19:42894136..42894138,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:42894136..42894138,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr19:42894136..42894138,- | |description=CAGE_peak_at_chr19:42894136..42894138,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.12e-50;1!UBERON:0008814;4.90e-26;2!UBERON:0010056;4.90e-26;2 | |ontology_enrichment_development_v019=UBERON:0009143;5.12e-50;1!UBERON:0008814;4.90e-26;2!UBERON:0010056;4.90e-26;2 | ||
|ontology_enrichment_disease=DOID:3112!1.61e-14!1 | |ontology_enrichment_disease=DOID:3112!1.61e-14!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!5.54e-19!3;UBERON:0001033!5.54e-19!3;UBERON:0010056!5.54e-19!3;UBERON:0002372!7.13e-15!1;UBERON:0001961!7.13e-15!1;UBERON:0001744!7.13e-15!1;UBERON:0001735!7.13e-15!1;UBERON:0006834!2.41e-14!1;UBERON:0001042!8.91e-13!10;UBERON:0009145!8.91e-13!10;UBERON:0006562!1.14e-11!11;UBERON:0000002!9.68e-10!6;UBERON:0001560!9.68e-10!6;UBERON:0008814!1.23e-08!15;UBERON:0000341!3.56e-08!2;UBERON:0003127!5.37e-08!2;UBERON:0000078!2.45e-07!18;UBERON:0000072!3.06e-07!46;UBERON:0001557!5.63e-07!19 | |ontology_enrichment_uberon=UBERON:0001723!5.54e-19!3;UBERON:0001033!5.54e-19!3;UBERON:0010056!5.54e-19!3;UBERON:0002372!7.13e-15!1;UBERON:0001961!7.13e-15!1;UBERON:0001744!7.13e-15!1;UBERON:0001735!7.13e-15!1;UBERON:0006834!2.41e-14!1;UBERON:0001042!8.91e-13!10;UBERON:0009145!8.91e-13!10;UBERON:0006562!1.14e-11!11;UBERON:0000002!9.68e-10!6;UBERON:0001560!9.68e-10!6;UBERON:0008814!1.23e-08!15;UBERON:0000341!3.56e-08!2;UBERON:0003127!5.37e-08!2;UBERON:0000078!2.45e-07!18;UBERON:0000072!3.06e-07!46;UBERON:0001557!5.63e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;5.12e-50;1!UBERON:0001961;5.12e-50;1!UBERON:0001744;5.12e-50;1!UBERON:0001042;5.12e-50;1!UBERON:0001735;5.12e-50;1!UBERON:0000341;4.90e-26;2!UBERON:0006562;8.10e-26;2!UBERON:0001723;7.35e-18;3!UBERON:0001033;7.35e-18;3!UBERON:0001043;1.03e-17;3!UBERON:0000974;1.27e-09;6!UBERON:0000165;3.92e-08;28 | |ontology_enrichment_uberon_v019=UBERON:0002372;5.12e-50;1!UBERON:0001961;5.12e-50;1!UBERON:0001744;5.12e-50;1!UBERON:0001042;5.12e-50;1!UBERON:0001735;5.12e-50;1!UBERON:0000341;4.90e-26;2!UBERON:0006562;8.10e-26;2!UBERON:0001723;7.35e-18;3!UBERON:0001033;7.35e-18;3!UBERON:0001043;1.03e-17;3!UBERON:0000974;1.27e-09;6!UBERON:0000165;3.92e-08;28 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,6.58e-50,1;UBERON:0001961,6.58e-50,1;UBERON:0001744,6.58e-50,1;UBERON:0001735,6.58e-50,1;UBERON:0000341,4.32e-26,2;UBERON:0001042,9.44e-21,10;UBERON:0009145,9.44e-21,10;UBERON:0006562,5.63e-19,11;UBERON:0001723,8.00e-18,3;UBERON:0001033,8.00e-18,3;UBERON:0010056,8.00e-18,3;UBERON:0001043,9.46e-18,3;UBERON:0009143,9.46e-18,3;UBERON:0001557,1.81e-11,19;UBERON:0000166,4.74e-10,22;UBERON:0000153,4.39e-08,62;UBERON:0007811,4.39e-08,62;UBERON:0000165,7.15e-08,29;UBERON:0000930,7.15e-08,29;UBERON:0007023,8.86e-08,114 | |||
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|short_description=p@chr19:42894136..42894138,- | |short_description=p@chr19:42894136..42894138,- | ||
}} | }} |
Latest revision as of 08:58, 26 July 2015
Short description: | p@chr19:42894136..42894138, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42894136..42894138, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 6.58e-50 | 1 |
mucosa-associated lymphoid tissue | 6.58e-50 | 1 |
lymphoid tissue | 6.58e-50 | 1 |
tonsillar ring | 6.58e-50 | 1 |
throat | 4.32e-26 | 2 |
chordate pharynx | 9.44e-21 | 10 |
pharyngeal region of foregut | 9.44e-21 | 10 |
pharynx | 5.63e-19 | 11 |
tongue | 8.00e-18 | 3 |
gustatory system | 8.00e-18 | 3 |
future tongue | 8.00e-18 | 3 |
esophagus | 9.46e-18 | 3 |
esophageal region | 9.46e-18 | 3 |
upper respiratory tract | 1.81e-11 | 19 |
oral opening | 4.74e-10 | 22 |
anterior region of body | 4.39e-08 | 62 |
craniocervical region | 4.39e-08 | 62 |
mouth | 7.15e-08 | 29 |
stomodeum | 7.15e-08 | 29 |
adult organism | 8.86e-08 | 114 |