FFCP PHASE1:Hg19::chr19:44331332..44331339,-: Difference between revisions
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|id=chr19:44331332..44331339,-
|short_description=p3@ENST00000499389,p3@uc002oxo.1
|description=CAGE_peak_3_at_ENST00000499389_5end,CAGE_peak_3_at_uc002oxo.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000499389,uc002oxo.1_5end | |||
|cluster_id=chr19:44331332..44331339,- | |||
|coexpression_cluster_id=C277 | |||
|description=CAGE_peak_3_at_ENST00000499389_5end,CAGE_peak_3_at_uc002oxo.1_5end | |||
|id=chr19:44331332..44331339,- | |||
|ontology_enrichment_celltype=CL:0000242!1.02e-12!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.52e-50;2!CL:0000242;4.52e-50;2!CL:0000312;5.15e-21;5!CL:0000240;9.07e-18;6!CL:0000311;9.07e-18;6!CL:0000079;9.07e-18;6!CL:0000237;9.07e-18;6!CL:0000362;2.45e-12;9!CL:0002159;2.00e-08;14!CL:0000076;8.01e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.52e-50,2;CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;9.07e-18;6!CL:0000114;9.07e-18;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.06e-23!57;UBERON:0005068!4.06e-23!57;UBERON:0006241!4.06e-23!57;UBERON:0007135!4.06e-23!57;UBERON:0001017!3.03e-21!82;UBERON:0000955!1.59e-20!69;UBERON:0006238!1.59e-20!69;UBERON:0005743!4.42e-20!86;UBERON:0002020!7.22e-20!34;UBERON:0003528!7.22e-20!34;UBERON:0002616!1.75e-19!59;UBERON:0001950!2.63e-19!20;UBERON:0000073!8.17e-18!94;UBERON:0001016!8.17e-18!94;UBERON:0002619!1.69e-17!22;UBERON:0000988!7.50e-17!3;UBERON:0007023!4.69e-16!115;UBERON:0000956!2.63e-15!25;UBERON:0000203!2.63e-15!25;UBERON:0001869!1.51e-14!32;UBERON:0003075!3.42e-14!86;UBERON:0007284!3.42e-14!86;UBERON:0002791!4.58e-14!33;UBERON:0001893!1.30e-13!34;UBERON:0002780!1.64e-13!41;UBERON:0001890!1.64e-13!41;UBERON:0006240!1.64e-13!41;UBERON:0002346!2.08e-13!90;UBERON:0003080!3.79e-13!42;UBERON:0001876!2.27e-12!2;UBERON:0003076!2.41e-12!15;UBERON:0003057!2.41e-12!15;UBERON:0002148!4.43e-12!2;UBERON:0009662!4.43e-12!2;UBERON:0001871!2.60e-11!7;UBERON:0004733!6.20e-11!12;UBERON:0002028!6.20e-11!12;UBERON:0007277!6.20e-11!12;UBERON:0002298!7.50e-11!8;UBERON:0004121!1.74e-10!169;UBERON:0000924!3.84e-10!173;UBERON:0006601!3.84e-10!173;UBERON:0004732!4.47e-10!13;UBERON:0001872!4.68e-10!5;UBERON:0000033!5.32e-10!123;UBERON:0002680!8.83e-10!9;UBERON:0001895!8.83e-10!9;UBERON:0010092!8.83e-10!9;UBERON:0000153!2.27e-09!129;UBERON:0007811!2.27e-09!129;UBERON:0000200!1.46e-08!6;UBERON:0003056!1.72e-08!61;UBERON:0006331!2.46e-08!3;UBERON:0002771!3.41e-08!3;UBERON:0002902!6.60e-07!1;UBERON:0009899!6.60e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
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|short_description=p3@ENST00000499389,p3@uc002oxo.1 | |||
}} | }} |
Latest revision as of 14:35, 27 July 2015
Short description: | p3@ENST00000499389, p3@uc002oxo.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000499389_5end, CAGE_peak_3_at_uc002oxo.1_5end |
Coexpression cluster: | C277_mesothelioma_epithelioid_thyroid_extraskeletal_alveolar_glioblastoma_adenocarcinoma |
Association with transcript: | 18bp_to_ENST00000499389, uc002oxo.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.52e-50 | 2 |
keratinocyte | 5.15e-21 | 5 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
epidermal cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 2.00e-08 | 14 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |