FFCP PHASE1:Hg19::chr19:45322073..45322085,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45322073..45322085,+ | |||
|description=CAGE_peak_at_chr19:45322073..45322085,+ | |description=CAGE_peak_at_chr19:45322073..45322085,+ | ||
|id=chr19:45322073..45322085,+ | |id=chr19:45322073..45322085,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.66e-14!254;CL:0000076!1.07e-07!62 | |ontology_enrichment_celltype=CL:0000066!4.66e-14!254;CL:0000076!1.07e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002231;8.56e-13;3!CL:0002336;2.26e-10;1!CL:0002261;2.26e-10;1!CL:0002170;2.26e-10;1!CL:0000313;2.26e-10;1!CL:0002563;1.45e-09;4!CL:0002076;7.00e-09;42!CL:0002251;3.09e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.05e-12,3;CL:0002336,1.98e-10,1;CL:0002261,1.98e-10,1;CL:0002170,1.98e-10,1;CL:0000313,2.16e-10,1;CL:0002563,1.07e-09,4;CL:0002076,1.43e-09,42;CL:0000223,1.13e-08,58;CL:0002251,2.75e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.68e-12!106;DOID:0050687!6.15e-10!143;DOID:1749!1.13e-07!14 | |ontology_enrichment_disease=DOID:305!7.68e-12!106;DOID:0050687!6.15e-10!143;DOID:1749!1.13e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2152;2.26e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.16e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.75e-12!169;UBERON:0000925!4.75e-12!169;UBERON:0006595!4.75e-12!169;UBERON:0001007!5.23e-11!155;UBERON:0001555!5.23e-11!155;UBERON:0007026!5.23e-11!155;UBERON:0000161!1.33e-09!35;UBERON:0005911!6.10e-09!82;UBERON:0005157!6.04e-08!51;UBERON:0005153!1.31e-07!37;UBERON:0001046!1.39e-07!19;UBERON:0004921!1.99e-07!129;UBERON:0004185!1.99e-07!129;UBERON:0000162!3.57e-07!14;UBERON:0001353!3.57e-07!14;UBERON:0000163!3.57e-07!14;UBERON:0006866!3.57e-07!14;UBERON:0000164!3.57e-07!14;UBERON:0000931!3.57e-07!14;UBERON:0000344!8.51e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!4.75e-12!169;UBERON:0000925!4.75e-12!169;UBERON:0006595!4.75e-12!169;UBERON:0001007!5.23e-11!155;UBERON:0001555!5.23e-11!155;UBERON:0007026!5.23e-11!155;UBERON:0000161!1.33e-09!35;UBERON:0005911!6.10e-09!82;UBERON:0005157!6.04e-08!51;UBERON:0005153!1.31e-07!37;UBERON:0001046!1.39e-07!19;UBERON:0004921!1.99e-07!129;UBERON:0004185!1.99e-07!129;UBERON:0000162!3.57e-07!14;UBERON:0001353!3.57e-07!14;UBERON:0000163!3.57e-07!14;UBERON:0006866!3.57e-07!14;UBERON:0000164!3.57e-07!14;UBERON:0000931!3.57e-07!14;UBERON:0000344!8.51e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0000344;7.79e-11;20!UBERON:0004911;2.26e-10;1!UBERON:0000996;5.78e-10;1!UBERON:0000997;5.78e-10;1!UBERON:0002171;5.78e-10;1!UBERON:0005056;5.78e-10;1!UBERON:0006518;5.78e-10;1!UBERON:0008949;5.78e-10;1!UBERON:0004176;5.78e-10;1!UBERON:0000101;5.78e-10;1!UBERON:0002167;5.78e-10;1!UBERON:0001242;1.45e-09;4!UBERON:0001262;1.45e-09;4!UBERON:0004786;1.45e-09;4!UBERON:0004808;1.45e-09;4!UBERON:0001277;1.45e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.19e-11,20;UBERON:0004911,2.16e-10,1;UBERON:0000996,3.40e-10,1;UBERON:0002171,3.71e-10,1;UBERON:0006518,3.71e-10,1;UBERON:0008949,3.71e-10,1;UBERON:0000101,3.71e-10,1;UBERON:0002167,3.71e-10,1;UBERON:0000997,4.44e-10,1;UBERON:0005056,4.44e-10,1;UBERON:0001242,1.07e-09,4;UBERON:0001262,1.07e-09,4;UBERON:0004786,1.07e-09,4;UBERON:0004808,1.07e-09,4;UBERON:0001277,1.07e-09,4;UBERON:0001046,1.42e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0.087834785693126,0.72038491523742,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.825354125820202,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0.286804595389004,0.243947412259191,0.265059536642971,0,0.621966330092223,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0.343135620597051,0.768251997860379,0,0,2.22212268380471,0.325808305310325,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0.623912584592421,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,3.2632051389738,0.601519410909855,1.10497186723076,0.114814448164607,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.515205058238611,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0.435050081742686,0,0.267096106940212,0.661139661443912,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0.470719003883896,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,0,0.994147647766298,0,0,0,0.63337622438398,0.996239941255349,0,0,0,0,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.61221999997337,0.724999575434793,1.137934482855,0,0.472775363535873,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,1.11538995422883,0.230850775511391,0,0.46112780877612,0.269272933229316,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,1.13082457147153,0.216388639742091,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.347119476670262,1.17590876897253,0.174118413160805,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.391102765469606,0.0801588202515337,0.426905989478705,0,0,0,1.02956998717179,0.14405479798815,0.124252535565433,2.12124631155116,0,0,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0,0,0.687481272035051,0,0.399358000997982,0,0.223171457441873,0.201550417460179,0,0,0.472699093843342,0.576911008668165,0.943649613958588,1.08270229666224,0,0,0,0.160753148465019,0.962776056180637,0.83088067605837,0,0,0,0.670869375198532,1.02447419488958,0.944182586429966,0,0.179287339332845,0.767660789277781,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0.226624183040251,0.293104467356165,0,0,0.13223260174269,0,0,0.533937062838473,0.314408610199332,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0,0,0.385239660814607,0.857766365499703,1.04397716786085,0.453411851024545,0,0,0,0.617602894321944,0.438568099157414,0.530067437837643,0.192914038270915,0,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0.196295437002051,0,2.01771458373847,0.924205329202706,0,0,0,0.451261970095544,0,0,0.523813388962845,0.327543835020193,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.638812138197976,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0,0,0.827356886187777,0.222462803784138,0.235479278551542,0,0.280272163313789,0,0.64778277365586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| ||
|short_description=p@chr19:45322073..45322085,+ | |short_description=p@chr19:45322073..45322085,+ | ||
}} | }} |
Latest revision as of 14:44, 27 July 2015
Short description: | p@chr19:45322073..45322085, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45322073..45322085, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.05e-12 | 3 |
buccal mucosa cell | 1.98e-10 | 1 |
endothelial cell of viscerocranial mucosa | 1.98e-10 | 1 |
keratinized cell of the oral mucosa | 1.98e-10 | 1 |
serous secreting cell | 2.16e-10 | 1 |
intestinal epithelial cell | 1.07e-09 | 4 |
endo-epithelial cell | 1.43e-09 | 42 |
endodermal cell | 1.13e-08 | 58 |
epithelial cell of alimentary canal | 2.75e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.19e-11 | 20 |
epithelium of female gonad | 2.16e-10 | 1 |
vagina | 3.40e-10 | 1 |
lower lobe of right lung | 3.71e-10 | 1 |
right lung lobe | 3.71e-10 | 1 |
lower lobe of lung | 3.71e-10 | 1 |
lobe of lung | 3.71e-10 | 1 |
right lung | 3.71e-10 | 1 |
mammalian vulva | 4.44e-10 | 1 |
external female genitalia | 4.44e-10 | 1 |
intestinal mucosa | 1.07e-09 | 4 |
wall of intestine | 1.07e-09 | 4 |
gastrointestinal system mucosa | 1.07e-09 | 4 |
gastrointestinal system epithelium | 1.07e-09 | 4 |
intestinal epithelium | 1.07e-09 | 4 |
hindgut | 1.42e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.16e-10 | 1 |